Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 151
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Synechococcus elongatus PCC 7942, PCC 7942 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Synpcc7942_2221 | ribosomal protein L24 | chromosome | CDS | 2293939 | 342 | - | 0.532164 |
NA | Synpcc7942_2512 | Protein of unknown function UPF0004 | chromosome | CDS | 2590765 | 1359 | - | 0.578366 |
NA | Synpcc7942_2299 | ribosomal protein S15 | chromosome | CDS | 2369596 | 309 | + | 0.569579 |
NA | Synpcc7942_1278 | ribosomal protein L35 | chromosome | CDS | 1301569 | 201 | - | 0.557214 |
NA | Synpcc7942_0634 | ribosomal protein L11 | chromosome | CDS | 625866 | 426 | - | 0.553991 |
NA | Synpcc7942_1614 | ribosomal protein L34 | chromosome | CDS | 1682665 | 138 | + | 0.652174 |
NA | Synpcc7942_2082 | elongation factor EF-G | chromosome | CDS | 2161587 | 1989 | - | 0.58371 |
NA | Synpcc7942_2440 | Polyribonucleotide nucleotidyltransferase | chromosome | CDS | 2515544 | 2151 | - | 0.58252 |
NA | Synpcc7942_2415 | lysyl-tRNA synthetase | chromosome | CDS | 2486856 | 1515 | - | 0.574257 |
NA | Synpcc7942_0632 | 50S ribosomal protein L10 | chromosome | CDS | 624322 | 528 | - | 0.537879 |
NA | Synpcc7942_0633 | ribosomal protein L1 | chromosome | CDS | 625078 | 714 | - | 0.557423 |
NA | Synpcc7942_0972 | YjgF-like protein | chromosome | CDS | 979369 | 393 | + | 0.597964 |
NA | Synpcc7942_2206 | ribosomal protein L13 | chromosome | CDS | 2285062 | 456 | - | 0.546053 |
NA | Synpcc7942_1602 | RNA methyltransferase TrmH, group 1 | chromosome | CDS | 1667296 | 738 | + | 0.607046 |
NA | Synpcc7942_2215 | ribosomal protein L15 | chromosome | CDS | 2290963 | 444 | - | 0.578829 |
NA | Synpcc7942_1509 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | chromosome | CDS | 1559329 | 1074 | + | 0.57635 |
NA | Synpcc7942_2224 | ribosomal protein L29 | chromosome | CDS | 2294940 | 195 | - | 0.533333 |
NA | Synpcc7942_1679 | photosystem II reaction center W protein | chromosome | CDS | 1747252 | 339 | + | 0.542773 |
NA | Synpcc7942_2374 | Protein of unknown function UPF0004 | chromosome | CDS | 2441447 | 1359 | + | 0.599706 |
NA | Synpcc7942_1874 | RNA methyltransferase TrmH, group 2 | chromosome | CDS | 1946154 | 471 | - | 0.543524 |
NA | Synpcc7942_2430 | tRNA (guanine-N(2)-)-methyltransferase | chromosome | CDS | 2500967 | 1146 | - | 0.581152 |
NA | Synpcc7942_2457 | glycyl-tRNA synthetase, alpha subunit | chromosome | CDS | 2535240 | 879 | + | 0.552901 |
NA | Synpcc7942_0227 | peptidyl-tRNA hydrolase | chromosome | CDS | 224629 | 627 | + | 0.585327 |
NA | Synpcc7942_1577 | arginyl-tRNA synthetase | chromosome | CDS | 1640261 | 1773 | - | 0.562888 |
NA | Synpcc7942_0311 | dimethyladenosine transferase | chromosome | CDS | 310414 | 840 | - | 0.584524 |
NA | Synpcc7942_0062 | glucose-1-phosphate cytidylyltransferase | chromosome | CDS | 62469 | 774 | - | 0.439276 |
NA | Synpcc7942_2235 | tRNA (guanine-N1)-methyltransferase | chromosome | CDS | 2300665 | 708 | + | 0.581921 |
NA | Synpcc7942_2570 | tyrosyl-tRNA synthetase | chromosome | CDS | 2648824 | 1209 | - | 0.53019 |
NA | Synpcc7942_2216 | ribosomal protein S5 | chromosome | CDS | 2291444 | 543 | - | 0.572744 |
NA | Synpcc7942_2211 | 30S ribosomal protein S13 | chromosome | CDS | 2288243 | 378 | - | 0.587302 |
NA | Synpcc7942_2226 | ribosomal protein S3 | chromosome | CDS | 2295574 | 735 | - | 0.565986 |
NA | Synpcc7942_0922 | Glutamate--tRNA ligase | chromosome | CDS | 927391 | 903 | - | 0.59247 |
NA | Synpcc7942_1313 | aspartyl-tRNA synthetase | chromosome | CDS | 1340634 | 1800 | + | 0.572778 |
NA | Synpcc7942_2446 | methionine aminopeptidase, type I | chromosome | CDS | 2523086 | 834 | - | 0.56235 |
NA | Synpcc7942_1520 | ribosomal protein S20 | chromosome | CDS | 1572486 | 297 | + | 0.569024 |
NA | Synpcc7942_2350 | Sua5/YciO/YrdC/YwlC | chromosome | CDS | 2417593 | 702 | - | 0.589744 |
NA | Synpcc7942_1593 | conserved hypothetical protein | chromosome | CDS | 1660025 | 696 | + | 0.537356 |
NA | Synpcc7942_2204 | ribosomal protein L31 | chromosome | CDS | 2284391 | 234 | - | 0.547009 |
NA | Synpcc7942_1774 | ribosomal protein S21 | chromosome | CDS | 1839385 | 174 | + | 0.545977 |
NA | Synpcc7942_1662 | cysteinyl-tRNA synthetase | chromosome | CDS | 1731811 | 1437 | - | 0.574809 |
NA | Synpcc7942_0012 | ribosomal protein S6 | chromosome | CDS | 11641 | 324 | - | 0.552469 |
NA | Synpcc7942_1153 | conserved hypothetical protein | chromosome | CDS | 1179295 | 1845 | - | 0.592412 |
NA | Synpcc7942_2230 | 50S ribosomal protein L23 | chromosome | CDS | 2297905 | 303 | - | 0.564356 |
NA | Synpcc7942_2530 | ribosomal protein S2 | chromosome | CDS | 2611383 | 756 | + | 0.572751 |
NA | Synpcc7942_2531 | translation elongation factor Ts | chromosome | CDS | 2612241 | 666 | + | 0.543544 |
NA | Synpcc7942_1022 | conserved hypothetical protein | chromosome | CDS | 1037049 | 789 | - | 0.576679 |
NA | Synpcc7942_0065 | translation initiation factor IF-3 | chromosome | CDS | 64987 | 555 | - | 0.531532 |
NA | Synpcc7942_2231 | 50S ribosomal protein L4 | chromosome | CDS | 2298200 | 633 | - | 0.57346 |
NA | Synpcc7942_0120 | Cytosine/adenosine deaminases-like | chromosome | CDS | 119508 | 486 | - | 0.553498 |
NA | Synpcc7942_2203 | peptide chain release factor 1 | chromosome | CDS | 2283183 | 1107 | - | 0.539295 |
NA | Synpcc7942_2324 | Glutathione synthetase | chromosome | CDS | 2391369 | 972 | + | 0.59465 |
NA | Synpcc7942_1122 | ribosomal protein L33 | chromosome | CDS | 1140801 | 195 | + | 0.548718 |
NA | Synpcc7942_2263 | histidyl-tRNA synthetase | chromosome | CDS | 2331234 | 1308 | - | 0.600153 |
NA | Synpcc7942_0878 | ribonuclease, Rne/Rng family | chromosome | CDS | 883835 | 2427 | + | 0.591265 |
NA | Synpcc7942_1973 | mannose-1-phosphate guanyltransferase | chromosome | CDS | 2043151 | 1170 | - | 0.533333 |
NA | Synpcc7942_2348 | S-adenosylmethionine | chromosome | CDS | 2415233 | 1080 | + | 0.583333 |
NA | Synpcc7942_1856 | putative cytidine and deoxycytidylate deaminase | chromosome | CDS | 1925324 | 507 | + | 0.542406 |
NA | Synpcc7942_2064 | phenylalanyl-tRNA synthetase, alpha subunit | chromosome | CDS | 2140803 | 1002 | + | 0.575848 |
NA | Synpcc7942_0876 | alanyl-tRNA synthetase | chromosome | CDS | 877976 | 2700 | + | 0.584444 |
NA | Synpcc7942_1772 | ribosomal protein S16 | chromosome | CDS | 1838756 | 249 | + | 0.574297 |
NA | Synpcc7942_0498 | mannose-1-phosphate guanyltransferase | chromosome | CDS | 484585 | 2514 | + | 0.57677 |
NA | Synpcc7942_0283 | Dihydrouridine synthase TIM-barrel protein nifR3 | chromosome | CDS | 279619 | 1005 | - | 0.574129 |
NA | Synpcc7942_2259 | 16S rRNA processing protein RimM | chromosome | CDS | 2328300 | 549 | + | 0.591985 |
NA | Synpcc7942_0355 | ribosome-binding factor A | chromosome | CDS | 348457 | 414 | - | 0.570048 |
NA | Synpcc7942_0241 | RNA methyltransferase, TrmA family | chromosome | CDS | 235487 | 1368 | + | 0.576754 |
NA | Synpcc7942_2229 | ribosomal protein L2 | chromosome | CDS | 2297012 | 864 | - | 0.586806 |
NA | Synpcc7942_1277 | ribosomal protein L20 | chromosome | CDS | 1301174 | 351 | - | 0.561254 |
NA | Synpcc7942_1308 | tryptophanyl-tRNA synthetase | chromosome | CDS | 1335009 | 1068 | + | 0.561798 |
NA | Synpcc7942_1992 | Initiation factor 2B alpha/beta/delta | chromosome | CDS | 2062388 | 1047 | - | 0.56256 |
NA | Synpcc7942_1591 | RNA binding S1 | chromosome | CDS | 1658135 | 888 | - | 0.56982 |
NA | Synpcc7942_1220 | ribosomal protein L27 | chromosome | CDS | 1242067 | 267 | + | 0.561798 |
NA | Synpcc7942_2365 | peptide chain release factor 3 Small GTP-binding protein domain | chromosome | CDS | 2430839 | 1671 | + | 0.573309 |
NA | Synpcc7942_2352 | putative sigma 54 modulation protein/ribosomal protein S30EA | chromosome | CDS | 2419575 | 624 | - | 0.487179 |
NA | Synpcc7942_2208 | ribosomal protein L17 | chromosome | CDS | 2286420 | 351 | - | 0.566952 |
NA | Synpcc7942_0055 | hypothetical protein | chromosome | CDS | 57223 | 684 | - | 0.362573 |
NA | Synpcc7942_1002 | photosystem I reaction center subunit II | chromosome | CDS | 1013888 | 429 | + | 0.543124 |
NA | Synpcc7942_1514 | Pseudouridine synthase, Rsu | chromosome | CDS | 1564750 | 600 | + | 0.593333 |
NA | Synpcc7942_2217 | ribosomal protein L18 | chromosome | CDS | 2291990 | 363 | - | 0.592287 |
NA | Synpcc7942_0884 | translation elongation factor Tu | chromosome | CDS | 889697 | 1230 | - | 0.566667 |
NA | Synpcc7942_2198 | conserved hypothetical protein | chromosome | CDS | 2276800 | 1131 | + | 0.501326 |
NA | Synpcc7942_2311 | conserved hypothetical protein | chromosome | CDS | 2379602 | 780 | - | 0.578205 |
NA | Synpcc7942_0455 | tRNA-guanine transglycosylases, various specificities queuine tRNA-ribosyltransferase | chromosome | CDS | 444001 | 1155 | + | 0.575758 |
NA | Synpcc7942_1219 | ribosomal protein L21 | chromosome | CDS | 1241649 | 384 | + | 0.544271 |
NA | Synpcc7942_2225 | ribosomal protein L16 | chromosome | CDS | 2295137 | 429 | - | 0.582751 |
NA | Synpcc7942_0507 | ribosome recycling factor | chromosome | CDS | 493736 | 549 | + | 0.520947 |
NA | Synpcc7942_2218 | 50S ribosomal protein L6 | chromosome | CDS | 2292352 | 540 | - | 0.568519 |
NA | Synpcc7942_2408 | conserved hypothetical protein | chromosome | CDS | 2481009 | 387 | - | 0.581395 |
NA | Synpcc7942_1487 | ribosomal protein S4 | chromosome | CDS | 1536986 | 609 | + | 0.582923 |
NA | Synpcc7942_2490 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 2569964 | 921 | - | 0.54506 |
NA | Synpcc7942_1534 | conserved hypothetical protein | chromosome | CDS | 1593215 | 2208 | + | 0.439764 |
NA | Synpcc7942_2212 | ribosomal protein L36 | chromosome | CDS | 2288775 | 114 | - | 0.491228 |
NA | Synpcc7942_2393 | glutamyl-tRNA synthetase | chromosome | CDS | 2467688 | 1446 | + | 0.602351 |
NA | Synpcc7942_0554 | conserved hypothetical protein | chromosome | CDS | 536594 | 1092 | + | 0.561355 |
NA | Synpcc7942_0502 | conserved hypothetical protein | chromosome | CDS | 489508 | 567 | - | 0.57672 |
NA | Synpcc7942_1142 | methionyl-tRNA synthetase | chromosome | CDS | 1166949 | 1578 | + | 0.558935 |
NA | Synpcc7942_2119 | RNA methyltransferase TrmH, group 3 | chromosome | CDS | 2200097 | 1560 | - | 0.604487 |
NA | Synpcc7942_1073 | ribonuclease PH | chromosome | CDS | 1084451 | 717 | + | 0.596932 |
NA | Synpcc7942_1863 | modification methylase, HemK family | chromosome | CDS | 1933701 | 882 | + | 0.591837 |
NA | Synpcc7942_2205 | 30S ribosomal protein S9 | chromosome | CDS | 2284655 | 408 | - | 0.590686 |
NA | Synpcc7942_2437 | isoleucyl-tRNA synthetase | chromosome | CDS | 2509504 | 2865 | - | 0.573822 |
NA | Synpcc7942_0587 | valyl-tRNA synthetase | chromosome | CDS | 573854 | 2730 | + | 0.488645 |
NA | Synpcc7942_0791 | polyA polymerase | chromosome | CDS | 785973 | 1239 | - | 0.609362 |
NA | Synpcc7942_2606 | threonyl-tRNA synthetase | chromosome | CDS | 2688305 | 1815 | - | 0.522314 |
NA | Synpcc7942_2117 | glutamyl-tRNA(Gln) amidotransferase, A subunit | chromosome | CDS | 2198155 | 1440 | - | 0.561111 |
NA | Synpcc7942_0449 | seryl-tRNA synthetase | chromosome | CDS | 438675 | 1332 | - | 0.58033 |
NA | Synpcc7942_0887 | ribosomal protein S12 | chromosome | CDS | 893750 | 375 | - | 0.568 |
NA | Synpcc7942_0631 | ribosomal protein L7/L12 | chromosome | CDS | 623876 | 387 | - | 0.540052 |
NA | Synpcc7942_1199 | probable tRNA/rRNA methyltransferase | chromosome | CDS | 1227303 | 705 | - | 0.61844 |
NA | Synpcc7942_2232 | 50S ribosomal protein L3 | chromosome | CDS | 2298877 | 642 | - | 0.573209 |
NA | Synpcc7942_2565 | translation elongation factor P | chromosome | CDS | 2644835 | 558 | - | 0.537634 |
NA | Synpcc7942_1374 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 1414283 | 1632 | - | 0.581495 |
NA | Synpcc7942_1920 | leucyl-tRNA synthetase | chromosome | CDS | 1995596 | 2598 | - | 0.573133 |
NA | Synpcc7942_0042 | ribosomal protein L28 | chromosome | CDS | 40855 | 237 | - | 0.561181 |
NA | Synpcc7942_0914 | tRNA-(MS(2)IO(6)A)-hydroxylase-like | chromosome | CDS | 921780 | 612 | - | 0.565359 |
NA | Synpcc7942_2559 | ribosomal protein L9 | chromosome | CDS | 2637730 | 459 | - | 0.553377 |
NA | Synpcc7942_1222 | tRNA pseudouridine synthase B | chromosome | CDS | 1242925 | 885 | + | 0.589831 |
NA | Synpcc7942_2223 | 30S ribosomal protein S17 | chromosome | CDS | 2294657 | 249 | - | 0.578313 |
NA | Synpcc7942_1112 | Pseudouridine synthase, RluD | chromosome | CDS | 1129444 | 942 | - | 0.595541 |
NA | Synpcc7942_2142 | probable translation initiation factor SUI1 | chromosome | CDS | 2226468 | 336 | - | 0.592262 |
NA | Synpcc7942_1864 | conserved hypothetical protein | chromosome | CDS | 1934588 | 588 | + | 0.590136 |
NA | Synpcc7942_2210 | 30S ribosomal protein S11 | chromosome | CDS | 2287781 | 393 | - | 0.597964 |
NA | Synpcc7942_0678 | 3'-5' exonuclease | chromosome | CDS | 672767 | 636 | + | 0.558176 |
NA | Synpcc7942_2322 | glutamyl-tRNA(Gln) amidotransferase, C subunit | chromosome | CDS | 2390654 | 291 | + | 0.525773 |
NA | Synpcc7942_2110 | methionyl-tRNA formyltransferase | chromosome | CDS | 2190917 | 984 | - | 0.590447 |
NA | Synpcc7942_0830 | asparaginyl-tRNA synthetase | chromosome | CDS | 823942 | 1389 | + | 0.547876 |
NA | Synpcc7942_0885 | translation elongation factor G Small GTP-binding protein domain | chromosome | CDS | 890953 | 2085 | - | 0.543885 |
NA | Synpcc7942_2020 | translation initiation factor IF-2 Small GTP-binding protein domain | chromosome | CDS | 2086845 | 3093 | - | 0.597478 |
NA | Synpcc7942_1123 | ribosomal protein S18 | chromosome | CDS | 1141051 | 216 | + | 0.541667 |
NA | Synpcc7942_2207 | tRNA pseudouridine synthase A | chromosome | CDS | 2285533 | 885 | - | 0.579661 |
NA | Synpcc7942_0118 | glutamyl-tRNA(Gln) amidotransferase, B subunit | chromosome | CDS | 116943 | 1485 | + | 0.567677 |
NA | Synpcc7942_1500 | ribosomal protein L11 methyltransferase | chromosome | CDS | 1549179 | 900 | - | 0.584444 |
NA | Synpcc7942_2541 | ribosomal protein L19 | chromosome | CDS | 2622353 | 414 | + | 0.567633 |
NA | Synpcc7942_2219 | 30S ribosomal protein S8 | chromosome | CDS | 2292928 | 402 | - | 0.58209 |
NA | Synpcc7942_2227 | ribosomal protein L22 | chromosome | CDS | 2296333 | 354 | - | 0.581921 |
NA | Synpcc7942_0694 | RNA binding S1 | chromosome | CDS | 687133 | 924 | - | 0.551948 |
NA | Synpcc7942_2066 | TIM-barrel protein, yjbN family | chromosome | CDS | 2142279 | 1032 | - | 0.565891 |
NA | Synpcc7942_0319 | hemolysin A | chromosome | CDS | 316162 | 819 | + | 0.594628 |
NA | Synpcc7942_1010 | Pseudouridine synthase, Rsu | chromosome | CDS | 1021969 | 732 | - | 0.581967 |
NA | Synpcc7942_2510 | translation initiation factor IF-1 | chromosome | CDS | 2589959 | 213 | + | 0.525822 |
NA | Synpcc7942_0404 | peptide chain release factor 2 | chromosome | CDS | 397595 | 915 | - | 0.560656 |
NA | Synpcc7942_0018 | glycyl-tRNA synthetase, beta subunit | chromosome | CDS | 16206 | 2187 | - | 0.583448 |
NA | Synpcc7942_0886 | ribosomal protein S7 | chromosome | CDS | 893112 | 471 | - | 0.573248 |
NA | Synpcc7942_1340 | Formylmethionine deformylase | chromosome | CDS | 1374061 | 579 | - | 0.55095 |
NA | Synpcc7942_2220 | 50S ribosomal protein L5 | chromosome | CDS | 2293357 | 540 | - | 0.559259 |
NA | Synpcc7942_2228 | ribosomal protein S19 | chromosome | CDS | 2296705 | 276 | - | 0.547101 |
NA | Synpcc7942_2222 | ribosomal protein L14 | chromosome | CDS | 2294280 | 366 | - | 0.554645 |
NA | Synpcc7942_0883 | ribosomal protein S10 | chromosome | CDS | 889306 | 318 | - | 0.566038 |
NA | Synpcc7942_0962 | sun protein | chromosome | CDS | 969968 | 1356 | - | 0.598083 |
NA | Synpcc7942_1315 | gid protein | chromosome | CDS | 1344583 | 1401 | - | 0.581727 |
NA | Synpcc7942_1959 | prolyl-tRNA synthetase | chromosome | CDS | 2030322 | 1821 | + | 0.560132 |
NA | Synpcc7942_0446 | 30S ribosomal protein S14 | chromosome | CDS | 436519 | 303 | - | 0.594059 |