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2024-05-19 12:04:30

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 175

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Magnetospirillum magneticum AMB-1, AMB-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA amb4347 Peptidyl-tRNA hydrolasechromosome CDS4752438 705 - 0.678014
NA amb0834 Isoleucyl-tRNA synthetasechromosome CDS893418 1992 + 0.677711
NA amb2803 Glutamyl-and glutaminyl-tRNA synthetasechromosome CDS2995344 1434 + 0.677127
NA amb2294 Ribosomal protein L36chromosome CDS2499996 126 - 0.579365
NA amb0243 N-formylmethionyl-tRNA deformylasechromosome CDS275424 573 - 0.635253
NA amb3128 Ribosomal protein L23chromosome CDS3375200 309 - 0.63754
NA amb3047 2-methylthioadenine synthetasechromosome CDS3286294 1347 + 0.682999
NA amb3113 Ribosomal protein S5chromosome CDS3368522 633 - 0.676145
NA amb1635 Probable sensor protein hoxXchromosome CDS1774823 1653 - 0.670901
NA amb3121 Ribosomal protein S17chromosome CDS3372103 240 - 0.5875
NA amb2101 Ribosomal protein S18chromosome CDS2275949 279 - 0.663082
NA amb2482 NAD(FAD)-utilizing enzyme possibly involved in translationchromosome CDS2659974 1239 + 0.671509
NA amb3521 Methionyl-tRNA formyltransferasechromosome CDS3870669 894 - 0.638702
NA amb1236 Cysteinyl-tRNA synthetasechromosome CDS1313062 1380 + 0.677536
NA amb4078 Ribosomal protein L27chromosome CDS4481068 270 + 0.633333
NA amb0157 Nucleoside-diphosphate-sugar pyrophosphorylasechromosome CDS181516 744 - 0.657258
NA amb4061 Superfamily II DNA and RNA helicasechromosome CDS4461653 1869 + 0.705725
NA amb3035 Tyrosyl-tRNA synthetasechromosome CDS3276343 1248 + 0.651442
NA amb3142 Ribosomal protein L10chromosome CDS3394364 516 - 0.645349
NA amb4158 tRNA nucleotidyltransferase/poly(A) polymerasechromosome CDS4571351 1308 - 0.711009
NA amb0927 Putative transposase Y4QJchromosome CDS995357 1173 + 0.669224
NA amb4117 Polyribonucleotide nucleotidyltransferasechromosome CDS4520986 2163 + 0.662506
NA amb4447 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunitchromosome CDS4861284 282 + 0.659574
NA amb2860 hypothetical proteinchromosome CDS3061581 612 - 0.686275
NA amb2129 rRNA methylasechromosome CDS2302956 768 - 0.669271
NA amb0246 hypothetical proteinchromosome CDS278832 405 + 0.669136
NA amb3411 Hypothetical pseudouridine synthase in lpd 3'regionchromosome CDS3705795 678 - 0.690265
NA amb3149 rRNA methylasechromosome CDS3399082 804 + 0.716418
NA amb4064 RimM protein, required for 16S rRNA processingchromosome CDS4465481 531 + 0.642185
NA amb3767 hypothetical proteinchromosome CDS4144853 1035 + 0.514976
NA amb0711 Translation elongation factorchromosome CDS770335 2028 + 0.676529
NA amb3117 Ribosomal protein S14chromosome CDS3370501 306 - 0.633987
NA amb1385 Superfamily II DNA and RNA helicasechromosome CDS1502815 1752 - 0.682648
NA amb2247 Valyl-tRNA synthetasechromosome CDS2450016 2670 + 0.657678
NA amb3141 Ribosomal protein L7/L12chromosome CDS3393940 375 - 0.634667
NA amb2477 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthasechromosome CDS2656179 744 - 0.688172
NA amb4116 Ribosomal protein S15P/S13Echromosome CDS4520546 270 + 0.603704
NA amb2673 hypothetical proteinchromosome CDS2865354 264 + 0.689394
NA amb0242 Methionyl-tRNA formyltransferasechromosome CDS274510 918 - 0.711329
NA amb3114 Ribosomal protein L18chromosome CDS3369167 363 - 0.650138
NA amb3337 Ribonuclease G and Echromosome CDS3629272 1035 - 0.741063
NA amb3112 Ribosomal protein L15chromosome CDS3367764 480 - 0.664583
NA amb2148 Putative translation initiation inhibitorchromosome CDS2324992 399 + 0.601504
NA amb4342 hypothetical proteinchromosome CDS4746495 477 - 0.60587
NA amb3135 Ribosomal protein S12chromosome CDS3381242 372 - 0.620968
NA amb4329 2'-5' RNA ligasechromosome CDS4735765 537 + 0.705773
NA amb3134 Ribosomal protein S7chromosome CDS3380759 471 - 0.636943
NA amb4077 Ribosomal protein L21chromosome CDS4480734 303 + 0.656766
NA amb2055 hypothetical proteinchromosome CDS2239810 441 + 0.585034
NA amb3832 Putative translation initiation inhibitorchromosome CDS4232663 375 - 0.664
NA amb3122 Ribosomal protein L29chromosome CDS3372357 204 - 0.617647
NA amb3932 Ribonuclease Dchromosome CDS4343640 612 + 0.643791
NA amb2473 rRNA methylasechromosome CDS2653719 645 + 0.689922
NA amb0635 Ribosomal protein S20chromosome CDS683072 273 + 0.648352
NA amb0726 Ribosomal protein L11 methylasechromosome CDS788390 900 + 0.674444
NA amb0241 Pseudouridylate synthasechromosome CDS273740 771 - 0.695201
NA amb1285 Translation elongation factor Pchromosome CDS1405527 567 + 0.603175
NA amb4354 RNase P protein componentchromosome CDS4757514 402 + 0.631841
NA amb4384 Ribosomal protein L35chromosome CDS4786145 204 - 0.593137
NA amb4066 Ribosomal protein L19chromosome CDS4466721 447 + 0.653244
NA amb3148 GTPase-translation elongation factorchromosome CDS3397440 1191 - 0.649034
NA amb4070 Ribosome-binding factor Achromosome CDS4470753 429 - 0.692308
NA amb0833 hypothetical proteinchromosome CDS892564 900 + 0.636667
NA amb4383 Ribosomal protein L20chromosome CDS4785785 357 - 0.62465
NA amb3569 Ribosomal protein L33chromosome CDS3923912 168 + 0.559524
NA amb0599 Queuine/archaeosine tRNA-ribosyltransferasechromosome CDS646101 1128 + 0.691489
NA amb3129 Ribosomal protein L4chromosome CDS3375505 621 - 0.653784
NA amb3734 Dienelactone hydrolase and related enzymechromosome CDS4108423 1098 + 0.683971
NA amb4312 Glutamyl-and glutaminyl-tRNA synthetasechromosome CDS4717363 834 - 0.703837
NA amb0612 hypothetical proteinchromosome CDS658740 267 - 0.730337
NA amb0340 Threonyl-tRNA synthetasechromosome CDS377776 1917 + 0.646322
NA amb2836 Ribonuclease Dchromosome CDS3034592 1194 + 0.670854
NA amb3144 Ribosomal protein L11chromosome CDS3395895 327 - 0.629969
NA amb4381 Phenylalanyl-tRNA synthetase alpha subunitchromosome CDS4784626 732 - 0.632514
NA amb0271 Peptide chain release factor RF-3chromosome CDS302520 1491 + 0.655265
NA amb4126 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthasechromosome CDS4530276 1047 - 0.683859
NA amb2813 Protein chain release factor Bchromosome CDS3004357 1116 - 0.648746
NA amb3123 Ribosomal protein L16/L10Echromosome CDS3372563 417 - 0.635492
NA amb2128 Ribosomal protein S4 and related proteinchromosome CDS2302175 618 - 0.619741
NA amb3126 Ribosomal protein S19chromosome CDS3374076 279 - 0.602151
NA amb2349 hypothetical proteinchromosome CDS2555329 174 - 0.655172
NA amb4346 Predicted GTPase, probable translation factorchromosome CDS4751330 1104 - 0.654891
NA amb4065 tRNA-(guanine-N1)-methyltransferasechromosome CDS4466001 717 + 0.665272
NA amb1584 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunitchromosome CDS1713376 1458 - 0.646776
NA amb3557 Ribosomal protein L13chromosome CDS3910243 552 - 0.637681
NA amb0798 Nucleoside-diphosphate-sugar pyrophosphorylasechromosome CDS856023 735 + 0.707483
NA amb4071 Translation initiation factor 2chromosome CDS4471218 2619 - 0.683085
NA amb4247 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunitschromosome CDS4657204 702 - 0.702279
NA amb2837 Aspartyl-tRNA synthetasechromosome CDS3031963 2631 - 0.653744
NA amb3131 Ribosomal protein S10chromosome CDS3376839 378 - 0.603175
NA amb3092 hypothetical proteinchromosome CDS3339844 381 + 0.692913
NA amb3038 Ribosomal protein L31chromosome CDS3278152 234 + 0.589744
NA amb2352 Ribosomal protein L32chromosome CDS2557118 183 + 0.644809
NA amb1603 Methionine aminopeptidasechromosome CDS1730087 804 - 0.633085
NA amb0147 tRNA and rRNA cytosine-C5-methylasechromosome CDS169657 1296 - 0.712191
NA amb4481 hypothetical proteinchromosome CDS4894050 387 - 0.622739
NA amb2900 Predicted rRNA methylasechromosome CDS3096123 1422 - 0.670886
NA amb3805 Hypothetical pseudouridine synthase in lpd 3'regionchromosome CDS4204299 690 - 0.685507
NA amb3779 23S rRNA methylasechromosome CDS4161842 735 + 0.692517
NA amb2098 Ribosomal protein L9chromosome CDS2274409 564 - 0.670213
NA amb4123 Predicted translation initiation factor 2B subunitchromosome CDS4527157 1089 + 0.677686
NA amb2521 Seryl-tRNA synthetasechromosome CDS2702881 1269 - 0.664303
NA amb4348 Ribosomal protein L25chromosome CDS4753143 609 - 0.640394
NA amb4498 RNase PHchromosome CDS4913096 726 + 0.665289
NA amb4087 Predicted rRNA methylasechromosome CDS4488559 336 - 0.684524
NA amb3130 Ribosomal protein L3chromosome CDS3376138 690 - 0.643478
NA amb3186 Pseudouridylate synthase, 23S RNA-specificchromosome CDS3450154 1518 + 0.666667
NA amb3506 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS3852863 948 + 0.694093
NA amb3712 Putative translation factorchromosome CDS4079231 1107 + 0.738031
NA amb3124 Ribosomal protein S3chromosome CDS3372998 684 - 0.662281
NA amb1235 Glutamyl-tRNA synthetasechromosome CDS1311714 1335 + 0.689888
NA amb4353 Ribosomal protein L34chromosome CDS4757373 135 + 0.681481
NA amb2472 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthasechromosome CDS2652976 591 - 0.659898
NA amb3125 Ribosomal protein L22chromosome CDS3373686 387 - 0.635659
NA amb2495 Ribosome recycling factorchromosome CDS2672799 573 - 0.612565
NA amb3119 Ribosomal protein L24chromosome CDS3371379 321 - 0.641745
NA amb2497 Translation elongation factor Tschromosome CDS2674268 939 - 0.673056
NA amb3019 PredictedtRNA(5-methylaminomethyl-2-thiouridylat e)methyltransferasechromosome CDS3263429 1122 - 0.69697
NA amb3107 Ribosomal protein L17chromosome CDS3362927 423 - 0.64539
NA amb2820 Ribosomal protein S21chromosome CDS3010029 285 + 0.614035
NA amb3116 Ribosomal protein S8chromosome CDS3370089 399 - 0.629073
NA amb3636 Prolyl-tRNA synthetasechromosome CDS3996146 1416 - 0.669492
NA amb0121 Nucleoside-diphosphate-sugar pyrophosphorylasechromosome CDS140887 846 + 0.621749
NA amb0027 Leucyl-tRNA synthetasechromosome CDS27722 2589 + 0.658555
NA amb4245 Superfamily II DNA and RNA helicasechromosome CDS4653903 2427 - 0.710342
NA amb1428 Superfamily II DNA and RNA helicasechromosome CDS1555539 1431 + 0.69392
NA amb0214 2-methylthioadenine synthetasechromosome CDS242547 1359 - 0.689478
NA amb2298 hypothetical proteinchromosome CDS2501913 549 - 0.628415
NA amb0598 S-adenosylmethioninetRNA-ribosyltransferase-isomerasechromosome CDS645101 876 + 0.686073
NA amb1618 Protein chain release factor Achromosome CDS1747774 1065 + 0.658216
NA amb4115 Pseudouridine synthasechromosome CDS4519514 1023 + 0.667644
NA amb0506 Flagellar hook-length control proteinchromosome CDS542448 1764 - 0.704649
NA amb3127 Ribosomal protein L2chromosome CDS3374368 828 - 0.65942
NA amb3532 Alanyl-tRNA synthetasechromosome CDS3879924 2637 + 0.677285
NA amb3118 Ribosomal protein L5chromosome CDS3370822 540 - 0.605556
NA amb1585 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidasechromosome CDS1714838 1266 - 0.672196
NA amb0237 Cytosine/adenosine deaminasechromosome CDS267400 447 - 0.704698
NA amb3339 Translation initiation factor 1chromosome CDS3630880 387 - 0.571059
NA amb2103 Ribosomal protein S6chromosome CDS2276227 435 - 0.632184
NA amb0341 Translation initiation factor 3chromosome CDS379794 522 + 0.605364
NA amb2651 Glycyl-tRNA synthetasechromosome CDS2841849 885 - 0.644068
NA amb2529 Arginyl-tRNA synthetasechromosome CDS2710282 1731 - 0.661467
NA amb2478 16S RNA G1207 methylase RsmCchromosome CDS2656956 945 - 0.681481
NA amb2498 Ribosomal protein S2chromosome CDS2675297 801 - 0.657928
NA amb2007 Protein chain release factor Bchromosome CDS2179627 306 + 0.683007
NA amb3115 Ribosomal protein L6P/L9Echromosome CDS3369541 534 - 0.58427
NA amb1668 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidasechromosome CDS1805886 1176 - 0.709184
NA amb3132 GTPase-translation elongation factorchromosome CDS3377433 1191 - 0.650714
NA amb4072 Predicted nucleic-acid-binding protein implicated in transcription terminationchromosome CDS4473864 597 - 0.678392
NA amb2650 Glycyl-tRNA synthetasechromosome CDS2839778 2067 - 0.668118
NA amb0321 Ribosomal protein L28chromosome CDS360512 168 + 0.64881
NA amb4063 Ribosomal protein S16chromosome CDS4465103 372 + 0.685484
NA amb3783 tRNA and rRNA cytosine-C5-methylasechromosome CDS4165793 1287 + 0.706294
NA amb4382 hypothetical proteinchromosome CDS4785354 348 - 0.692529
NA amb2448 Methionyl-tRNA synthetasechromosome CDS2623962 1551 - 0.639587
NA amb2365 NifR3-like proteinchromosome CDS2568443 918 + 0.660131
NA amb3611 Lysyl-tRNA synthetasechromosome CDS3964517 1587 + 0.653434
NA amb0850 Xanthine and CO dehydrogenase maturation factorchromosome CDS911130 780 + 0.705128
NA amb2751 Putative translation initiation inhibitorchromosome CDS2937420 468 + 0.688034
NA amb4261 Ribosomal protein S1chromosome CDS4670906 1698 - 0.645465
NA amb1619 Methylase of polypeptide chain release factorchromosome CDS1748838 852 + 0.720657
NA amb3109 Ribosomal protein S11chromosome CDS3364634 396 - 0.661616
NA amb4506 Glutathione synthase/Ribosomal protein S6 modification enzymechromosome CDS4919866 945 + 0.646561
NA amb3556 Ribosomal protein S9chromosome CDS3909768 471 - 0.670913
NA amb3133 Translation elongation factorchromosome CDS3378656 2085 - 0.635012
NA amb0328 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferasechromosome CDS367407 1317 - 0.729689
NA amb1515 hypothetical proteinchromosome CDS1645005 630 + 0.680952
NA amb2700 Ribonuclease Ichromosome CDS2892958 645 + 0.660465
NA amb1283 Truncated possibly inactive lysyl-tRNA synthetasechromosome CDS1402022 1047 - 0.69914
NA amb3120 Ribosomal protein L14chromosome CDS3371702 369 - 0.612466
NA amb4463 2-methylthioadenine synthetasechromosome CDS4873525 1317 + 0.687927
NA amb1288 hypothetical proteinchromosome CDS1408280 1194 + 0.69933
NA amb4408 Tryptophanyl-tRNA synthetasechromosome CDS4811880 807 - 0.630731
NA amb3143 Ribosomal protein L1chromosome CDS3395198 693 - 0.659452
NA amb3718 Dimethyladenosine transferasechromosome CDS4088227 846 + 0.712766