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2024-05-27 16:25:52

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 151

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactococcus lactis subsp. lactis Il1403, IL1403
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS alanyl-tRNA synthetase (EC 6.1.1.7)chromosome CDS1778369 2619 - 0.383734
aldR regulatory protein AldRchromosome CDS1252931 381 + 0.346457
ansB L-asparaginasechromosome CDS742698 972 - 0.377572
argS arginyl-tRNA synthetase (EC 6.1.1.19)chromosome CDS2115841 1695 - 0.369911
asnS asparaginyl-tRNA synthetase (EC 6.1.1.22)chromosome CDS1895088 1344 - 0.37872
aspS aspartyl-tRNA synthetase (EC 6.1.1.12)chromosome CDS2040170 1773 - 0.376763
cysS cysteinyl-tRNA synthetase (EC 6.1.1.16)chromosome CDS1918254 1347 - 0.363029
def polypeptide deformylasechromosome CDS554872 636 - 0.382075
efp elongation factor Pchromosome CDS691623 558 + 0.360215
fmt methyonyl-tRNA formyltransferase (EC 2.1.2.9)chromosome CDS1961034 960 - 0.384375
frr ribosome recycling factorchromosome CDS2086423 558 - 0.385305
fusA elongation factor Gchromosome CDS2352170 2130 - 0.415023
gatA Glu-tRNA amidotransferase subunit Achromosome CDS165635 1461 + 0.377823
gatB Glu-tRNA amidotransferase subunit Bchromosome CDS167708 1467 + 0.38514
gatC Glu-tRNA amidotransferase subunit Cchromosome CDS165330 306 + 0.395425
gidC glucose inhibited division protein GidCchromosome CDS1256769 1344 + 0.373512
gltX glutamyl-tRNA synthetase (EC 6.1.1.17)chromosome CDS2140195 1452 - 0.376722
glyS glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)chromosome CDS1101840 954 + 0.384696
glyT glycyl-tRNA synthetase beta chain (EC 6.1.1.14)chromosome CDS1102793 2022 + 0.346686
hemK protoporphyrinogen oxidase (EC 1.3.3.4)chromosome CDS588486 813 + 0.348093
hisS histidyl-tRNA synthetase (EC 6.1.1.21)chromosome CDS2042397 1293 - 0.37123
ileS isoleucyl-tRNA synthetase (EC 6.1.1.5)chromosome CDS1931209 2799 - 0.374419
infA translation initiation factor IF-1chromosome CDS2154030 219 - 0.420091
infB translation initiation factor IF-2chromosome CDS775779 2835 + 0.392945
infC translation initiation factor IF-3chromosome CDS1911881 495 - 0.391919
ksgA kasugamycin dimethyltransferasechromosome CDS689448 885 + 0.338983
leuS leucyl-tRNA synthetase (EC 6.1.1.4)chromosome CDS827445 2490 + 0.393173
lysS lysyl-tRNA synthetase (EC 6.1.1.6)chromosome CDS375784 1485 - 0.388552
metS methyonyl-tRNA synthetase (EC 6.1.1.10)chromosome CDS799071 1989 + 0.357969
miaA tRNA isopentenyltransferasechromosome CDS614999 885 + 0.352542
papL poly(A) polymerase (EC 2.7.7.19)chromosome CDS1602114 1236 - 0.357605
pepM mathionine aminopeptidasechromosome CDS600904 855 + 0.416374
pheS phenylalanil-tRNA synthetase alpha chain (EC 6.1.1.20)chromosome CDS2009087 1041 - 0.39097
pi112 prophage pi1 protein 12chromosome CDS453816 777 + 0.333333
pi246 prophage pi2 protein 46chromosome CDS1068379 831 + 0.371841
pi316 prophage pi3 protein 16, tail componentchromosome CDS1431162 420 - 0.333333
pnpA polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)chromosome CDS1921905 2322 - 0.396641
prfA peptide chain release factor 1chromosome CDS585962 1074 + 0.365922
prfB peptide chain release factor 2chromosome CDS998162 1098 + 0.40255
prfC peptide chain release factor 3chromosome CDS351198 1572 + 0.386132
prmA methyltransferasechromosome CDS104221 954 + 0.406709
proS prolyl-tRNA synthetase (EC 6.1.1.15)chromosome CDS2196129 1851 - 0.366829
pth peptidyl-tRNA hydrolase (EC 3.1.1.29)chromosome CDS16598 567 + 0.372134
queA S-adenosylmethionine tRNA ribosyltransferasechromosome CDS1616777 1038 + 0.395954
rbfA ribosome-binding factor Achromosome CDS778883 360 + 0.358333
rheA ATP-dependent RNA helicasechromosome CDS353033 1644 + 0.409367
rheB ATP-dependent RNA helicasechromosome CDS415804 1341 + 0.358688
rimM 16S rRNA processing proteinchromosome CDS1607127 516 - 0.337209
rluA pseudouridine synthasechromosome CDS2181360 867 + 0.331027
rluB pseudouridine synthasechromosome CDS1307979 774 - 0.372093
rluC pseudouridine synthasechromosome CDS1390135 558 - 0.344086
rluD pseudouridine synthasechromosome CDS1026079 906 + 0.37638
rluE pseudouridine synthasechromosome CDS367551 882 + 0.369615
rnpA ribonuclease P protein component (EC 3.1.26.5)chromosome CDS131494 354 + 0.338983
rplA 50S ribosomal protein L1chromosome CDS2078636 690 - 0.411594
rplB 50S ribosomal protein L2chromosome CDS2167532 831 - 0.444043
rplC 50S ribosomal protein L3chromosome CDS2169323 624 - 0.419872
rplD 50S ribosomal protein L4chromosome CDS2168671 627 - 0.425837
rplE 50S ribosomal protein L5chromosome CDS2163766 543 - 0.394107
rplF 50S ribosomal protein L6chromosome CDS2161460 537 - 0.417132
rplI 50S ribosomal protein L9chromosome CDS753056 453 + 0.350993
rplJ 50S ribosomal protein L10chromosome CDS1301414 516 - 0.410853
rplK 50S ribosomal protein L11chromosome CDS2079621 426 - 0.396714
rplL 50S ribosomal protein L7/L12chromosome CDS1300979 366 - 0.404372
rplM 50S ribosomal protein L13chromosome CDS2346727 447 - 0.402685
rplN 50S ribosomal protein L14chromosome CDS2164767 369 - 0.449865
rplO 50S ribosomal protein L15chromosome CDS2159464 444 - 0.416667
rplP 50S ribosomal protein L16chromosome CDS2165648 414 - 0.442029
rplQ 50S ribosomal protein L17chromosome CDS2151688 381 - 0.414698
rplR 50S ribosomal protein L18chromosome CDS2160897 348 - 0.431034
rplS 50S ribosomal protein L19chromosome CDS897638 378 + 0.444444
rplT 50S ribosomal protein L20chromosome CDS1911031 360 - 0.416667
rplU 50S ribosomal protein L21chromosome CDS1090626 315 + 0.380952
rplV 50S ribosomal protein L22chromosome CDS2166731 348 - 0.396552
rplW 50S ribosomal protein L23chromosome CDS2168378 294 - 0.360544
rplX 50S ribosomal protein L24chromosome CDS2164328 306 - 0.372549
rpmA 50S ribosomal protein L27chromosome CDS1091280 285 + 0.445614
rpmB 50S ribosomal protein L28chromosome CDS195892 195 - 0.369231
rpmC 50S ribosomal protein L29chromosome CDS2165439 210 - 0.37619
rpmD 50S ribosomal protein L30chromosome CDS2160182 180 - 0.388889
rpmE 50S ribosomal protein L31chromosome CDS1640277 246 - 0.382114
rpmF 50S ribosomal protein L32chromosome CDS96058 174 - 0.442529
rpmGA 50S ribosomal protein L33chromosome CDS661789 147 + 0.312925
rpmGB 50S ribosomal protein L33chromosome CDS95879 150 - 0.313333
rpmGC 50S ribosomal protein L33chromosome CDS2174932 150 - 0.373333
rpmH 50S ribosomal protein L34chromosome CDS133788 135 + 0.451852
rpmI 50S ribosomal protein L35chromosome CDS1911552 201 - 0.437811
rpmJ 50S ribosomal protein L36chromosome CDS2153860 117 - 0.401709
rpsA 30S ribosomal protein S1chromosome CDS853437 1227 + 0.415648
rpsB 30S ribosomal protein S2chromosome CDS2227343 768 - 0.407552
rpsC 30S ribosomal protein S3chromosome CDS2166065 654 - 0.422018
rpsD 30S ribosomal protein S4chromosome CDS283758 612 + 0.411765
rpsE 30S ribosomal protein S5chromosome CDS2160372 507 - 0.453649
rpsF 30S ribosomal protein S6chromosome CDS2274711 294 - 0.387755
rpsG 30S ribosomal protein S7chromosome CDS2354564 468 - 0.457265
rpsH 30S ribosomal protein S8chromosome CDS2162213 399 - 0.380952
rpsI 30S ribosomal protein S9chromosome CDS2346315 393 - 0.473282
rpsJ 30S ribosomal protein S10chromosome CDS2169965 309 - 0.404531
rpsK 30S ribosomal protein S11chromosome CDS2153073 384 - 0.429688
rpsL 30S ribosomal protein S12chromosome CDS2355050 414 - 0.442029
rpsM 30S ribosomal protein S13chromosome CDS2153477 366 - 0.415301
rpsN 30S ribosomal protein S14chromosome CDS2163562 186 - 0.413978
rpsN2 30S ribosomal protein S14chromosome CDS910421 270 + 0.366667
rpsO 30S ribosomal protein S15chromosome CDS1954639 270 - 0.403704
rpsP 30S ribosomal protein S16chromosome CDS1610323 273 - 0.369963
rpsQ 30S ribosomal protein S17chromosome CDS2165158 261 - 0.37931
rpsR 30S ribosomal protein S18chromosome CDS2273762 246 - 0.447154
rpsS 30S ribosomal protein S19chromosome CDS2167094 279 - 0.430108
rpsT 30S ribosomal protein S20chromosome CDS1796737 234 + 0.384615
rpsU 30S ribosomal protein S21chromosome CDS237226 177 + 0.38983
rsuA ribosomal small subunit pseudouridine synthase Achromosome CDS2326078 822 - 0.352798
serS seryl-tRNA synthetase (EC 6.1.1.11)chromosome CDS1767193 1272 + 0.386006
sunL rRNA methylasechromosome CDS1957830 1275 - 0.36
tgt queuine tRNA-ribosyltransferase (EC 2.4.2.29)chromosome CDS155375 1149 - 0.424717
thrS theronyl-tRNA synthetase (EC 6.1.1.3)chromosome CDS1987130 1941 - 0.394127
trmD tRNA methyltransferasechromosome CDS1606379 756 - 0.369048
trmH tRNA-guanosine methyltransferase (EC 2.1.1.34)chromosome CDS1941471 729 - 0.366255
trmU tRNA-methyltransferasechromosome CDS852072 1155 + 0.401732
trpS tryptophanyl-tRNA synthetase (EC 6.1.1.2)chromosome CDS67264 1026 - 0.387914
truA tRNA pseudouridine synthase A (EC 4.2.1.70)chromosome CDS484226 762 + 0.35958
truB tRNA pseudouridine synthase B (EC 4.2.1.70)chromosome CDS1140387 990 + 0.376768
tsf elongation factor Tschromosome CDS2226193 1029 - 0.392614
tuf elongation factor Tuchromosome CDS1929364 1188 - 0.443603
tyrS tyrosyl-tRNA synthetase 1 (EC 6.1.1.1)chromosome CDS390031 1260 - 0.364286
valS valyl-tRNA synthetase (EC 6.1.1.9)chromosome CDS2248267 2643 - 0.391222
yacB conserved hypothetical proteinchromosome CDS21351 318 + 0.311321
yacD HYPOTHETICAL PROTEINchromosome CDS22071 324 + 0.302469
ybbA conserved hypothetical proteinchromosome CDS110576 456 + 0.355263
ybgE amidasechromosome CDS169398 1500 + 0.402
yccF HYPOTHETICAL PROTEINchromosome CDS226060 309 + 0.346278
yfjA conserved hypothetical proteinchromosome CDS589901 813 + 0.340713
yfjD tRNA/rRNA methyltransferasechromosome CDS596779 759 + 0.370224
ygdA HYPOTHETICAL PROTEINchromosome CDS632384 558 + 0.38172
yhcI conserved hypothetical proteinchromosome CDS727161 468 + 0.416667
yhdC acetyl transferasechromosome CDS739685 582 + 0.305842
yhjG acetyl transferasechromosome CDS797386 564 - 0.351064
yiiB conserved hypothetical proteinchromosome CDS881773 732 + 0.355191
yjbE general stress protein GSP13chromosome CDS914709 432 + 0.3125
yjjG HYPOTHETICAL PROTEINchromosome CDS996445 531 - 0.380414
ykjA HYPOTHETICAL PROTEINchromosome CDS1090943 336 + 0.386905
ylgC HYPOTHETICAL PROTEINchromosome CDS1162226 510 - 0.331373
yljE conserved hypothetical proteinchromosome CDS1194125 1383 + 0.343456
ylxQ probable ribosomal proteinchromosome CDS775453 306 + 0.333333
ymdC kanamycin kinase (EC 2.7.1.95)chromosome CDS1234060 789 + 0.309252
yogG conserved hypothetical proteinchromosome CDS1465751 603 - 0.348259
yojB UNKNOWN PROTEINchromosome CDS1495949 315 - 0.342857
yqfF spermidine acetyltransferase (EC 2.3.1.57)chromosome CDS1656507 543 + 0.314917
yudI oxidoreductasechromosome CDS2035883 1005 + 0.406965
yvcA UNKNOWN PROTEINchromosome CDS2119778 594 - 0.407407
ywfF HYPOTHETICAL PROTEINchromosome CDS2254433 1542 - 0.367056
yyaL GTP-binding proteinchromosome CDS11119 1116 + 0.383513