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2024-05-20 16:02:46

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 125

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Ehrlichia ruminantium str. Welgevonden, Welgevonden
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA chromosome misc_feature999433 135 + 0.474074
Erum0660 Erum0660 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS97564 11148 + 0.326516
Erum0710 Erum0710 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS120001 372 + 0.346774
Erum1010 Erum1010 conserved hypothetical GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS177785 1092 - 0.321429
Erum1300 Erum1300 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS227314 4005 + 0.302622
Erum2620 Erum2620 conserved hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS449463 1338 - 0.318386
Erum2950 Erum2950 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS514775 600 - 0.26
Erum3330 Erum3330 conserved hypothetical proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS581013 954 - 0.324948
Erum3970 Erum3970 hypothetical proteinSubName: Full=Probable sigma(54) modulation protein; SubName: Full=Uncharacterized protein; chromosome CDS691518 597 + 0.256281
Erum4230 Erum4230 putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS731206 408 + 0.289216
Erum5510 Erum5510 putative ribonucleaseSubName: Full=Putative ribonuclease; EC=3.1.4.-; SubName: Full=Ribonuclease E; chromosome CDS949576 1833 - 0.293508
Erum5681 Erum5681 putative pseudogene (truncated deaminase) chromosome pseudo982535 189 + 0.306878
Erum5690 Erum5690 putative deaminaseSubName: Full=Putative deaminase; EC=3.5.4.-; chromosome CDS983373 438 - 0.335616
Erum6100 Erum6100 putative tRNA/rRNA methyltransferaseSubName: Full=Putative tRNA/rRNA methyltransferase; EC=2.1.1.-; chromosome CDS1024175 750 + 0.288
Erum6950 Erum6950 putative exonucleaseSubName: Full=Putative exonuclease; SubName: Full=Ribonuclease D; chromosome CDS1176896 1170 - 0.279487
Erum7550 Erum7550 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1292163 1242 - 0.308374
Erum7870 Erum7870 putative exonucleaseSubName: Full=Probable ribonuclease D; SubName: Full=Putative exonuclease; chromosome CDS1344412 618 + 0.359223
Erum8150 Erum8150 putative methyltransferaseSubName: Full=Bifunctional methyltransferase-hemK proteinhomolog and tRNA (Guanine-N(7)-)-methyltransferase protoporphyrinogen oxidase (HemK); SubName: Full=Putative methyltransferase; EC=2.1.1.-; chromosome CDS1401178 843 - 0.291815
Erum8161 Erum8161 putative pseudogene (truncated methionine aminopeptidase) chromosome pseudo1403446 186 + 0.349462
Erum8560 Erum8560 putative nucleic acid independent RNA polymeraseSubName: Full=Poly(A) polymerase; SubName: Full=Putative nucleic acid independent RNA polymerase; EC=2.7.7.-; chromosome CDS1470596 1194 + 0.281407
alaS Erum1500 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS257453 2664 + 0.307432
argS Erum4910 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS835882 1731 - 0.29636
aspS Erum6660 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome CDS1123461 1773 + 0.306825
cysS Erum3250 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS564581 1374 + 0.302766
fmt Erum2030 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS349866 912 + 0.313596
frr Erum7230 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS1232478 558 - 0.304659
fusA Erum1650 elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS281003 2070 + 0.357488
gatA Erum3670 glutamyl-tRNA(Gln) amidotransferase subunit ARecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS640876 1464 - 0.342213
gatB Erum2850 aspartyl/glutamyl-tRNA amidotransferase subunit BRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS503532 1446 + 0.319502
gltX1 Erum7610 glutamyl-tRNA synthetase 1RecName: Full=Glutamate--tRNA ligase 1; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 1; Short=GluRS 1; chromosome CDS1304663 1332 - 0.315315
gltX2 Erum4310 glutamyl-tRNA synthetase 2RecName: Full=Glutamate--tRNA ligase 2; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 2; Short=GluRS 2; chromosome CDS742506 1413 - 0.278132
glyQ Erum0110 glycyl-tRNA synthetase alpha chainSubName: Full=Glycyl-tRNA synthetase alpha chain; EC=6.1.1.14; chromosome CDS14660 843 + 0.316726
glyS Erum0120 glycyl-tRNA synthetase beta chainRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; chromosome CDS15517 2109 + 0.251778
gshB Erum6640 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome CDS1119909 939 - 0.29393
hisS Erum7010 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS1185385 1245 + 0.308434
ileS Erum4870 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS830618 3315 - 0.298341
infB Erum4690 translation initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS801117 2571 - 0.306107
infC Erum8900 translation initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS1511800 522 + 0.285441
ksgA Erum4030 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS706239 789 - 0.25602
leuS Erum3010 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS523155 2493 + 0.3213
lysS Erum4220 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; chromosome CDS728815 1539 + 0.297596
map Erum8160 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS1402027 801 - 0.334582
metG Erum7710 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; chromosome CDS1322062 1521 - 0.309007
pheS Erum1360 phenylalanyl-tRNA synthetase alpha chainRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS238526 1035 - 0.29372
pnp Erum3540 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS613606 2370 + 0.343882
possible rpsU Erum1530 putative 30S ribosomal protein S21SubName: Full=Probable 30S ribosomal protein S21; SubName: Full=Putative 30S ribosomal protein S21; chromosome CDS264364 339 - 0.327434
prfA Erum4500 peptide release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS773130 1080 + 0.310185
prfB Erum3650 peptide chain release factor 2SubName: Full=Peptide chain release factor 2; chromosome CDS638210 1105 - 0.316742
proS Erum3440 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS596900 1281 - 0.30523
probable def1 Erum0540 putative peptide deformylase 1RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS77840 546 - 0.342491
probable def2 Erum1820 putative peptide deformylase 2RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS310695 585 + 0.309402
probable efp Erum3190 putative elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS553107 570 + 0.322807
probable gatC Erum7910 putative glutamyl-tRNA(Gln) amidotransferase subunit CRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; chromosome CDS1351586 345 + 0.301449
probable infA Erum5110 putative translation initiation factor IF-1SubName: Full=Putative translation initiation factor IF-1; SubName: Full=Translation initiation factor IF-1; chromosome CDS864113 249 - 0.313253
probable miaA Erum4370 putative tRNA delta(2)-isopentenylpyrophoshate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS749915 903 + 0.273533
probable rbfA Erum4680 putative ribosome-binding factor ASubName: Full=Putative Ribosome-binding factor A; SubName: Full=Putative ribosome-binding factor A; chromosome CDS800773 348 - 0.247126
probable rimM Erum8850 putative 16S rRNA processing proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS1506502 519 + 0.244701
probable rluC Erum3210 putative ribosomal large subunit pseudouridine synthase CRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS555611 918 + 0.287582
probable rplY Erum0920 putative 50S ribosomal protein L25RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS160226 627 - 0.350877
probable truB Erum3520 putative tRNA pseudouridine synthase BRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS612383 891 + 0.314254
pth Erum0910 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS159619 582 - 0.283505
rluD Erum5330 ribosomal large subunit pseudouridine synthase DRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS916282 975 + 0.287179
rplA Erum1690 50S ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS285604 663 + 0.315234
rplB Erum6040 50S ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS1019862 831 - 0.365824
rplC Erum6070 50S ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS1021608 696 - 0.310345
rplD Erum6060 50S ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS1020984 618 - 0.309061
rplE Erum5960 50S ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS1016480 534 - 0.299625
rplF Erum5930 50S ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS1015197 537 - 0.307263
rplI Erum6850 50S ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS1163512 624 - 0.344551
rplJ Erum1700 50S ribosomal protein L10SubName: Full=50S ribosomal protein L10; chromosome CDS286284 483 + 0.296066
rplK Erum1680 50S ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS285143 444 + 0.353604
rplL Erum1710 50S ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS286802 396 + 0.340909
rplM Erum7810 50S ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS1338938 471 + 0.360934
rplN Erum5980 50S ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS1017354 360 - 0.341667
rplO Erum5900 50S ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS1013802 474 - 0.295359
rplP Erum6000 50S ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS1018156 411 - 0.343066
rplQ Erum5840 50S ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS1009431 387 - 0.322997
rplR Erum5920 50S ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS1014821 363 - 0.294766
rplS Erum8870 50S ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS1507710 378 + 0.291005
rplT Erum1370 50S ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS239550 372 - 0.333333
rplU Erum4830 50S Ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS823467 309 - 0.31068
rplV Erum6020 50S ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS1019219 345 - 0.330435
rplW Erum6050 50S ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS1020697 291 - 0.257732
rplX Erum5970 50S ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS1017023 330 - 0.321212
rpmA Erum4820 50S ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS823195 267 - 0.367041
rpmB Erum5350 50S ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS923099 303 + 0.293729
rpmC Erum5991 50S ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS1017940 204 - 0.259804
rpmE Erum7480 50S ribosomal protein L31SubName: Full=50S ribosomal protein L31; chromosome CDS1277274 228 + 0.337719
rpmF Erum5740 50S ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS991865 183 - 0.306011
rpmG Erum2190 50S ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS378705 171 - 0.350877
rpmH Erum5791 50S ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS999433 135 + 0.474074
rpmI Erum1380 50S ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS239946 201 - 0.323383
rpmJ Erum3950 50S ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS689204 129 + 0.310078
rpsA Erum6120 30S ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS1025622 1698 + 0.310365
rpsB Erum5090 30S ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS861065 861 - 0.300813
rpsC Erum6010 30S ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS1018579 636 - 0.312893
rpsD Erum1940 30S ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS334645 609 - 0.316913
rpsE Erum5910 30S ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS1014279 525 - 0.348571
rpsF Erum6870 30S ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS1164456 330 - 0.351515
rpsG Erum1640 30S ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS280497 483 + 0.374741
rpsH Erum5940 30S ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS1015746 399 - 0.315789
rpsI Erum7820 30S ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS1339408 462 + 0.385281
rpsJ Erum6080 30S ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS1022296 336 - 0.345238
rpsK Erum5860 30S ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS1010992 384 - 0.382812
rpsL Erum1630 30S ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS280109 372 + 0.376344
rpsM Erum5870 30S ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS1011387 372 - 0.333333
rpsN Erum5950 30S ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS1016165 306 - 0.303922
rpsO Erum3530 30S ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS613292 282 + 0.319149
rpsP Erum1320 30S ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS234110 264 - 0.378788
rpsQ Erum5990 30S ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS1017723 225 - 0.355556
rpsR Erum6860 30S ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS1164157 288 - 0.34375
rpsS Erum6030 30S ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS1019577 282 - 0.333333
rpsT Erum0480 30S ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS67031 288 - 0.315972
serS Erum4540 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS779622 1284 + 0.287383
tgt Erum5750 queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS992248 1137 + 0.305189
thrS Erum8890 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1509872 1902 + 0.309674
trmD Erum8860 tRNA (Guanine-N(1)-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS1507010 708 + 0.338983
trmU Erum2230 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS381487 1113 - 0.302785
trpS Erum1120 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS195478 999 - 0.313313
truA Erum4240 tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS732895 741 - 0.291498
tsf Erum5080 elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS860209 867 - 0.286044
tufA Erum1660 elongation factor Tu-ARecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS283090 1188 + 0.393098
tufB Erum6090 elongation factor Tu-BRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS1022632 1188 - 0.393098
tyrS Erum0620 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS89895 1257 + 0.319809
valS Erum0780 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS135473 2433 + 0.32388