Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 178
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Azoarcus sp. EbN1, EbN1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ebA2502 | hypothetical protein | chromosome | CDS | 1505729 | 1410 | - | 0.620567 |
NA | ebA3408 | hypothetical protein | chromosome | CDS | 2022377 | 654 | - | 0.674312 |
NA | ebA5985 | hypothetical protein | chromosome | CDS | 3550310 | 351 | + | 0.60114 |
NA | ebA2097 | hypothetical protein | chromosome | CDS | 1232029 | 393 | - | 0.661578 |
NA | ebA1143 | nucleotidyl transferase | chromosome | CDS | 664326 | 690 | + | 0.723188 |
NA | ebA1496 | hypothetical protein | chromosome | CDS | 884929 | 1323 | + | 0.703704 |
NA | ebA825 | translation elongation factor G | chromosome | CDS | 478206 | 2052 | + | 0.663743 |
NA | ebA4502 | ATP-dependent RNA helicase | chromosome | CDS | 2671502 | 1476 | - | 0.674797 |
NA | ebA3889 | initiation factor 2b family protein | chromosome | CDS | 2295562 | 1089 | - | 0.726354 |
NA | ebA5406 | probable cytosine/adenosine deaminases | chromosome | CDS | 3216047 | 465 | + | 0.683871 |
NA | ebA768 | hypothetical protein | chromosome | CDS | 439693 | 474 | + | 0.516878 |
NA | ebA3180 | hypothetical protein | chromosome | CDS | 1899673 | 585 | + | 0.661538 |
NA | ebA3090 | hypothetical protein | chromosome | CDS | 1843074 | 495 | + | 0.60202 |
NA | ebA713 | Pseudouridine synthase | chromosome | CDS | 410938 | 693 | - | 0.699856 |
NA | ebA4819 | predicted RNA-binding protein containing KH domain, possibly ribosomal protein | chromosome | CDS | 2855216 | 471 | - | 0.660297 |
NA | ebA4521 | hypothetical protein | chromosome | CDS | 2680563 | 609 | + | 0.633826 |
NA | ebA4133 | putative glutamyl-tRNA synthetase-related protein | chromosome | CDS | 2437578 | 948 | - | 0.716245 |
NA | ebA5139 | Metallo-beta-lactamase superfamily protein | chromosome | CDS | 3046701 | 1410 | + | 0.626241 |
NA | ebA7270 | conserved hypothetical protein | chromosome | CDS | 4286382 | 225 | - | 0.662222 |
NA | ebA3262 | hypothetical protein | chromosome | CDS | 1943530 | 2037 | + | 0.670103 |
NA | ebA5030 | conserved hypothetical protein | chromosome | CDS | 2986995 | 1155 | + | 0.700433 |
NA | ebA821 | hypothetical protein | chromosome | CDS | 474456 | 519 | + | 0.701349 |
NA | ebD93 | hypothetical protein, possibly phage-related | chromosome | CDS | 3267887 | 363 | - | 0.61157 |
NA | ebA5483 | phage related protein (head-tail adaptor) | chromosome | CDS | 3268695 | 333 | - | 0.642643 |
NA | ebA176 | conserved hypothetical protein | chromosome | CDS | 108096 | 1530 | + | 0.678431 |
NA | ebA4733 | radical SAM protein similar to MiaB | chromosome | CDS | 2799339 | 1332 | + | 0.62988 |
NA | ebA5862 | hypothetical protein | chromosome | CDS | 3489034 | 771 | + | 0.601816 |
NA | ebA6390 | Adenine specific methylase, HemK family | chromosome | CDS | 3796606 | 936 | + | 0.65812 |
NA | ebA2398 | conserved hypothetical protein | chromosome | CDS | 1432533 | 951 | - | 0.664564 |
NA | ebB108 | Sigma 54 modulation protein / S30EA ribosomal protein | chromosome | CDS | 2015102 | 324 | - | 0.564815 |
NA | ebA4984 | conserved hypothetical protein | chromosome | CDS | 2965751 | 2112 | + | 0.696496 |
NA | ebA6706 | hypothetical protein | chromosome | CDS | 3983857 | 768 | - | 0.669271 |
NA | ebA3606 | l-asparagine amidohydrolase | chromosome | CDS | 2129343 | 1086 | + | 0.703499 |
NA | ebA650 | sun homolog protein | chromosome | CDS | 378755 | 1284 | - | 0.690031 |
NA | ebA2980 | conserved hypothetical protein | chromosome | CDS | 1777714 | 471 | + | 0.626327 |
NA | ebA4139 | predicted GTPase, probably involved in regulation of ribosome function | chromosome | CDS | 2440079 | 1092 | - | 0.635531 |
NA | ebA412 | conserved hypothetical protein | chromosome | CDS | 246753 | 1452 | + | 0.670799 |
NA | ebA5857 | putative metallo-beta-lactamase family protein | chromosome | CDS | 3486558 | 1455 | + | 0.686598 |
NA | ebA3326 | hypothetical protein | chromosome | CDS | 1979493 | 636 | + | 0.674528 |
alaS | ebA1021 | Alanyl-tRNA synthetase | chromosome | CDS | 596024 | 2622 | - | 0.666285 |
argS | ebA3614 | Arginyl-tRNA synthetase | chromosome | CDS | 2136088 | 1764 | + | 0.679705 |
aspS | ebA4339 | Aspartyl-tRNA synthetase | chromosome | CDS | 2567349 | 1800 | - | 0.655556 |
cafA | ebA3964 | ribonuclease G (RNase G) | chromosome | CDS | 2334634 | 1455 | - | 0.643986 |
cca | ebA3379 | tRNA adenylyltransferase | chromosome | CDS | 2006477 | 1224 | - | 0.696895 |
cspR | ebB33 | RNA methyltransferase CspR (SpoU class) | chromosome | CDS | 621323 | 465 | - | 0.666667 |
cysS | ebA4792 | cysteinyl-tRNA synthetase | chromosome | CDS | 2835537 | 1386 | + | 0.632035 |
deaD | ebA5738 | ATP-dependent RNA helicase DeaD | chromosome | CDS | 3402825 | 1977 | - | 0.670207 |
def1 | ebB91 | N-formylmethionyl-tRNA deformylase 1 | chromosome | CDS | 1758348 | 504 | - | 0.634921 |
def2 | ebA62 | N-formylmethionyl-tRNA deformylase 2 | chromosome | CDS | 33775 | 528 | - | 0.649621 |
dtd | ebA64 | D-tyrosyl-tRNA(Tyr) deacylase | chromosome | CDS | 34345 | 459 | - | 0.671024 |
dusB | ebA1152 | tRNA-dihydrouridine synthase | chromosome | CDS | 667703 | 1053 | + | 0.659069 |
efp | ebA2973 | translation elongation factor P (EF-P) | chromosome | CDS | 1774768 | 558 | - | 0.586021 |
fmt | ebA2954 | methionyl-tRNA formyltransferase | chromosome | CDS | 1757401 | 951 | - | 0.715037 |
frr | ebA5990 | ribosome recycling factor | chromosome | CDS | 3553093 | 558 | + | 0.62724 |
ftsJ | ebA4820 | cell division protein FtsJ | chromosome | CDS | 2855726 | 624 | + | 0.636218 |
fusA | ebA3824 | Elongation factor G 1 (EF-G 1) | chromosome | CDS | 2257359 | 2097 | + | 0.613257 |
gatA | ebA3030 | Glutamyl-tRNA(Gln) amidotransferase subunit A | chromosome | CDS | 1808215 | 1473 | - | 0.702648 |
gatB | ebA3029 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | chromosome | CDS | 1806717 | 1482 | - | 0.665317 |
glnS | ebA4065 | Glutaminyl-tRNA synthetase | chromosome | CDS | 2397730 | 1734 | - | 0.647059 |
gltX | ebA6855 | Glutamyl-tRNA synthetase | chromosome | CDS | 4067241 | 1398 | - | 0.660229 |
glyQ | ebA1331 | glycyl-tRNA synthetase alpha chain | chromosome | CDS | 786047 | 948 | - | 0.636076 |
glyS | ebA1330 | glycyl-tRNA synthetase beta chain | chromosome | CDS | 783960 | 2091 | - | 0.68197 |
gshB | ebA2546 | glutathione synthetase (GSH synthetase) | chromosome | CDS | 1527440 | 975 | - | 0.684103 |
hemK | ebA1176 | Protein-glutamine N-methyltransferase | chromosome | CDS | 686084 | 843 | - | 0.68446 |
hisS | ebA1260 | histidyl-tRNA synthetase | chromosome | CDS | 745013 | 1317 | - | 0.661352 |
ileS | ebA4448 | isoleucyl-tRNA synthetase | chromosome | CDS | 2636017 | 2820 | - | 0.653192 |
infA | ebA1871 | translation initiation factor IF-1 | chromosome | CDS | 1087448 | 258 | - | 0.596899 |
infA1 | ebD115 | Translation initiation factor IF-1 | chromosome | CDS | 3979379 | 261 | - | 0.601533 |
infB | ebA5841 | translation initiation factor IF-2 | chromosome | CDS | 3474796 | 2838 | + | 0.651868 |
infC | ebA870 | translation initiation factor IF-3 | chromosome | CDS | 509123 | 522 | - | 0.58046 |
ksgA | ebA1138 | dimethyladenosine transferase | chromosome | CDS | 657584 | 798 | - | 0.677945 |
lasT | ebA6408 | RNA methyltransferase | chromosome | CDS | 3806116 | 729 | - | 0.657064 |
leuS | ebA4386 | leucyl-tRNA synthetase | chromosome | CDS | 2593442 | 2622 | - | 0.641114 |
ligT | ebA6539 | 2'-5' RNA ligase | chromosome | CDS | 3876909 | 606 | - | 0.70462 |
lysU | ebA6841 | Lysyl-tRNA synthetase (class II) | chromosome | CDS | 4059133 | 1509 | + | 0.640822 |
map | ebA5984 | methionine aminopeptidase | chromosome | CDS | 3549466 | 822 | - | 0.650852 |
miaA | ebA7097 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 4188477 | 1149 | + | 0.707572 |
miaB | ebA1339 | 2-methylthioadenine synthetase | chromosome | CDS | 790966 | 1338 | - | 0.64574 |
pcnB | ebA7112 | RNA-poly(A) polymerase | chromosome | CDS | 4198988 | 1359 | + | 0.677704 |
pheS | ebA868 | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 507313 | 1032 | - | 0.641473 |
pnp | ebA5846 | polyribonucleotide nucleotidyltransferase protein | chromosome | CDS | 3479464 | 2100 | + | 0.642381 |
prfA | ebA1177 | peptide chain release factor 1 (RF-1) | chromosome | CDS | 686928 | 1080 | - | 0.67037 |
prfB | ebA5809 | peptide chain release factor 2 (RF-2),gene containing programmed frameshift site | chromosome | CDS | 3450414 | 1105 | - | 0.625339 |
prfC | ebA3251 | peptide chain release factor 3 (RF-3) | chromosome | CDS | 1938453 | 1647 | + | 0.638737 |
prmA | ebA1475 | Ribosomal protein L11 methyltransferase | chromosome | CDS | 876605 | 906 | + | 0.696468 |
proS | ebA950 | prolyl-tRNA synthetase | chromosome | CDS | 560047 | 1752 | + | 0.648973 |
pth | ebA1411 | peptidyl-tRNA hydrolase | chromosome | CDS | 828103 | 591 | + | 0.663283 |
queA | ebA1413 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase, first step of queuosine biosynthesis | chromosome | CDS | 828934 | 1065 | + | 0.661972 |
rbfA | ebA5842 | ribosome-binding factor A | chromosome | CDS | 3477637 | 384 | + | 0.627604 |
relE | ebB86 | RelE-like Cytotoxic translational repressor of toxin-antitoxin stability system | chromosome | CDS | 1597607 | 378 | - | 0.619048 |
rhlE1 | ebA3563 | ATP-dependent RNA helicase | chromosome | CDS | 2106258 | 1392 | + | 0.688218 |
rhlE2 | ebA3682 | ATP-dependent RNA helicase | chromosome | CDS | 2171527 | 1527 | - | 0.685658 |
rimK | ebA6974 | glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) | chromosome | CDS | 4131029 | 1470 | + | 0.652381 |
rimL | ebA6209 | probable acetyltransferase | chromosome | CDS | 3678933 | 543 | - | 0.639042 |
rimM | ebA7167 | 16S rRNA processing protein | chromosome | CDS | 4226594 | 507 | + | 0.65286 |
rluC | ebA5443 | ribosomal large subunit pseudouridine synthase C | chromosome | CDS | 3248002 | 957 | + | 0.654127 |
rluD | ebA4725 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 2792935 | 921 | + | 0.698154 |
rne | ebA5441 | ribonuclease E (RNase E) | chromosome | CDS | 3244594 | 3024 | - | 0.650794 |
rnpA | ebB90 | Ribonuclease P protein component | chromosome | CDS | 1693170 | 360 | - | 0.608333 |
rph | c1A232 | Ribonuclease PH | chromosome | CDS | 1376725 | 720 | + | 0.702778 |
rplA | ebA3814 | 50S ribosomal protein L1 | chromosome | CDS | 2245818 | 699 | + | 0.649499 |
rplB | ebA3831 | 50S ribosomal protein L2 | chromosome | CDS | 2262744 | 828 | + | 0.661836 |
rplC | ebA3828 | 50S ribosomal protein L3 | chromosome | CDS | 2261159 | 645 | + | 0.627907 |
rplD | ebA3829 | 50S ribosomal protein L4 | chromosome | CDS | 2261815 | 621 | + | 0.608696 |
rplE | ebA3839 | 50S ribosomal protein L5 | chromosome | CDS | 2266738 | 540 | + | 0.572222 |
rplF | ebA3841 | 50S ribosomal protein L6 | chromosome | CDS | 2268008 | 534 | + | 0.61985 |
rplI | ebA4078 | 50S ribosomal protein L9 | chromosome | CDS | 2409386 | 453 | + | 0.622517 |
rplJ | ebA3816 | 50S ribosomal protein L10 | chromosome | CDS | 2246752 | 501 | + | 0.618762 |
rplK | ebA3812 | 50S ribosomal protein L11 | chromosome | CDS | 2245384 | 432 | + | 0.625 |
rplL | ebB123 | 50S ribosomal protein L7/L12 | chromosome | CDS | 2247292 | 375 | + | 0.632 |
rplM | ebA938 | 50S ribosomal protein L13 | chromosome | CDS | 555514 | 429 | - | 0.58042 |
rplN | ebB127 | 50S ribosomal protein L14 | chromosome | CDS | 2266030 | 369 | + | 0.609756 |
rplO | ebB131 | 50S ribosomal protein L15 | chromosome | CDS | 2269632 | 438 | + | 0.666667 |
rplP | ebA3834 | 50s Ribosomal protein L16 | chromosome | CDS | 2265011 | 414 | + | 0.623188 |
rplQ | ebB133 | 50S ribosomal protein L17 | chromosome | CDS | 2274276 | 405 | + | 0.624691 |
rplR | ebB130 | 50S ribosomal protein L18 | chromosome | CDS | 2268554 | 354 | + | 0.638418 |
rplS | ebA7169 | 50S ribosomal protein L19 | chromosome | CDS | 4227985 | 387 | + | 0.617571 |
rplT | ebB25 | 50S ribosomal protein L20 | chromosome | CDS | 508412 | 360 | - | 0.608333 |
rplU | ebB22 | 50S ribosomal protein L21 | chromosome | CDS | 492262 | 312 | + | 0.589744 |
rplV | ebA3832 | 50S ribosomal protein L22 | chromosome | CDS | 2263867 | 330 | + | 0.606061 |
rplW | ebB125 | 50S ribosomal protein L23 | chromosome | CDS | 2262432 | 306 | + | 0.584967 |
rplX | ebB128 | 50S Ribosomal protein L24 | chromosome | CDS | 2266411 | 318 | + | 0.606918 |
rplY | ebA1409 | 50S Ribosomal protein L25 | chromosome | CDS | 827447 | 606 | + | 0.635314 |
rpmA | ebC2 | 50S ribosomal protein L27 | chromosome | CDS | 492592 | 264 | + | 0.647727 |
rpmB | ebA4482 | 50S ribosomal protein L28 | chromosome | CDS | 2658781 | 237 | - | 0.578059 |
rpmC | ebC3 | 50S ribosomal protein L29 | chromosome | CDS | 2265427 | 195 | + | 0.558974 |
rpmD | ebC4 | 50S ribosomal protein L30 | chromosome | CDS | 2269448 | 183 | + | 0.584699 |
rpmE | ebA5215 | 50S ribosomal protein L31 | chromosome | CDS | 3089977 | 219 | - | 0.611872 |
rpmF | ebC5 | 50S ribosomal protein L32 | chromosome | CDS | 3251538 | 180 | + | 0.594444 |
rpmG | ebC6 | 50S ribosomal protein L33 | chromosome | CDS | 2658578 | 168 | - | 0.535714 |
rpmH | ebC7 | 50S ribosomal protein L34 | chromosome | CDS | 1693531 | 135 | - | 0.637037 |
rpmI | ebC8 | 50S ribosomal protein L35 | chromosome | CDS | 508784 | 198 | - | 0.59596 |
rpmJ | ebC9 | 50S ribosomal protein L36 | chromosome | CDS | 2271656 | 114 | + | 0.570175 |
rpsA | ebA903 | 30S ribosomal protein S1 | chromosome | CDS | 532380 | 1776 | - | 0.598536 |
rpsB | ebA5986 | 30S ribosomal protein S2 | chromosome | CDS | 3550657 | 756 | + | 0.624339 |
rpsC | ebA3833 | 30S ribosomal protein S3 | chromosome | CDS | 2264206 | 837 | + | 0.611708 |
rpsD | ebA3852 | 30S Ribosomal protein S4 | chromosome | CDS | 2272601 | 630 | + | 0.62381 |
rpsE | ebA3844 | 30S ribosomal protein S5 | chromosome | CDS | 2268920 | 525 | + | 0.634286 |
rpsF | ebA4075 | 30S Ribosomal protein S6 | chromosome | CDS | 2408391 | 387 | + | 0.625323 |
rpsG | ebA3822 | 30S ribosomal protein S7 | chromosome | CDS | 2256782 | 471 | + | 0.62845 |
rpsH | ebB129 | 30S ribosomal protein S8 | chromosome | CDS | 2267603 | 396 | + | 0.613636 |
rpsI | ebA937 | 30S ribosomal protein S9 | chromosome | CDS | 555108 | 393 | - | 0.597964 |
rpsJ | ebB124 | 30S Ribosomal protein S10 | chromosome | CDS | 2260734 | 312 | + | 0.605769 |
rpsK | ebA3850 | 30S ribosomal protein S11 | chromosome | CDS | 2272198 | 390 | + | 0.617949 |
rpsL | ebA3820 | 30S ribosomal protein S12 | chromosome | CDS | 2256336 | 414 | + | 0.57971 |
rpsM | ebB132 | 30S ribosomal protein S13 | chromosome | CDS | 2271823 | 363 | + | 0.573003 |
rpsN | ebC1 | 30S ribosomal protein S14 | chromosome | CDS | 2267285 | 306 | + | 0.611111 |
rpsO | ebA5844 | 30S ribosomal protein S15 | chromosome | CDS | 3479032 | 270 | + | 0.611111 |
rpsP | ebB247 | 30S ribosomal protein S16 | chromosome | CDS | 4226310 | 252 | + | 0.630952 |
rpsQ | ebC10 | 30S ribosomal protein S17 | chromosome | CDS | 2265618 | 270 | + | 0.596296 |
rpsR | ebB142 | 30S Ribosomal protein S18 | chromosome | CDS | 2409095 | 276 | + | 0.576087 |
rpsS | ebB126 | 30S ribosomal protein S19 | chromosome | CDS | 2263582 | 276 | + | 0.594203 |
rpsT | ebB177 | 30S ribosomal protein S20 | chromosome | CDS | 3019357 | 267 | + | 0.644195 |
rpsU | ebA4370 | 30S ribosomal protein S21 | chromosome | CDS | 2586390 | 213 | - | 0.600939 |
rsuA | ebA6135 | pseudouridylate synthase | chromosome | CDS | 3636395 | 954 | + | 0.684486 |
rsuA | ebA4056 | propable 16S pseudouridylate synthase | chromosome | CDS | 2391967 | 945 | + | 0.681481 |
rsuA | ebA2976 | ribosomal small subunit pseudouridine synthase A protein | chromosome | CDS | 1776938 | 720 | - | 0.652778 |
rumA | ebA771 | 23S rRNA (Uracil-5-)-methyltransferase | chromosome | CDS | 440898 | 1302 | - | 0.658218 |
serS | ebA7034 | Seryl-tRNA synthetase | chromosome | CDS | 4155951 | 1284 | - | 0.649533 |
spoU | ebA1246 | tRNA/RRNA methyltransferase protein | chromosome | CDS | 731680 | 735 | - | 0.689796 |
spoU | ebA6008 | tRNA/rRNA methyltransferase | chromosome | CDS | 3565281 | 786 | + | 0.731552 |
sua5 | ebA110 | putative translation factor (SUA5) | chromosome | CDS | 55740 | 1056 | - | 0.704545 |
sun | ebA2833 | tRNA and rRNA cytosine-C5-methylases sun | chromosome | CDS | 1686363 | 1344 | - | 0.685268 |
tdcF | ebB66 | putative translation initiation inhibitor, yjgF family | chromosome | CDS | 1354736 | 381 | - | 0.656168 |
tgt | ebA1415 | Queuosine tRNA-ribosyltransferase | chromosome | CDS | 829988 | 1113 | + | 0.677448 |
thrS | ebA871 | threonyl-tRNA synthetase | chromosome | CDS | 509673 | 1917 | - | 0.609807 |
trmA | ebA595 | tRNA (Uracil-5-)-methyltransferase | chromosome | CDS | 346790 | 1107 | + | 0.658537 |
trmD | ebA7168 | tRNA (Guanine-N(1)-)-methyltransferase | chromosome | CDS | 4227108 | 792 | + | 0.657828 |
trmU | ebA986 | tRNA5-methylaminomethyl-2-thiouridylate-methyltr ansferaseprotein | chromosome | CDS | 580161 | 1125 | - | 0.648889 |
trpS | ebA6131 | tryptophanyl-tRNA synthetase | chromosome | CDS | 3633709 | 1203 | + | 0.64256 |
truA | ebA4770 | pseudouridylate synthase A | chromosome | CDS | 2823704 | 795 | + | 0.649057 |
truB | ebA5843 | tRNA pseudouridine 55 synthase | chromosome | CDS | 3478027 | 927 | + | 0.652643 |
tsf | ebA5987 | elongation factor Ts (EF-Ts) | chromosome | CDS | 3551465 | 891 | + | 0.659933 |
tufB | ebA3826 | Elongation factor Tu | chromosome | CDS | 2259484 | 1191 | + | 0.648195 |
tufB | ebA3808 | Elongation factor Tu | chromosome | CDS | 2243032 | 1191 | + | 0.648195 |
tyrS | ebA931 | t-RNA synthetase, class Ib | chromosome | CDS | 550821 | 1200 | - | 0.573333 |
valS | ebA7186 | valyl-tRNA synthetase | chromosome | CDS | 4238108 | 2847 | + | 0.641377 |
yrdC | ebA6128 | putative translation factor YrdC/SUA5 | chromosome | CDS | 3632284 | 630 | + | 0.639683 |