Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 151
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Streptococcus thermophilus LMG 18311, LMG 18311 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | stu0476 | acetyltransferase, GNAT family | chromosome | CDS | 455702 | 306 | + | 0.454248 |
NA | stu1215 | hemolysin, putative | chromosome | CDS | 1069267 | 867 | - | 0.385236 |
NA | stu1000 | rRNA methyltransferase, putative | chromosome | CDS | 897148 | 1341 | + | 0.411633 |
NA | stu0238 | hypothetical protein | chromosome | CDS | 244332 | 717 | + | 0.410042 |
NA | stu0800 | conserved hypothetical protein | chromosome | CDS | 745272 | 642 | + | 0.361371 |
NA | stu0653 | tRNA methyltransferase, TrmA family | chromosome | CDS | 619295 | 1362 | + | 0.438326 |
NA | stu1199 | conserved hypothetical protein | chromosome | CDS | 1056095 | 786 | - | 0.394402 |
NA | stu0973 | amidase, truncated | chromosome | CDS | 877223 | 603 | + | 0.427861 |
NA | stu1456 | ribosomal large subunit pseudouridine synthase, RluD subfamily | chromosome | CDS | 1287011 | 897 | - | 0.42252 |
NA | stu0267 | rRNA methyltransferase, TrmH family | chromosome | CDS | 267808 | 555 | + | 0.427027 |
NA | stu0374 | conserved hypothetical protein | chromosome | CDS | 365556 | 534 | - | 0.353933 |
NA | stu0376 | tRNA methyltransferase, TrmA family | chromosome | CDS | 366971 | 1365 | + | 0.377289 |
NA | stu0211 | ribosomal large subunit pseudouridine synthase, RluD subfamily | chromosome | CDS | 216313 | 873 | - | 0.429553 |
NA | stu0628 | general stress protein | chromosome | CDS | 594950 | 366 | + | 0.409836 |
NA | stu0754 | hypothetical protein, Sua5/YciO/YrdC family protein | chromosome | CDS | 712164 | 606 | + | 0.40429 |
NA | stu1844 | cytidine/deoxycytidylate deaminase family protein, putative | chromosome | CDS | 1644727 | 519 | - | 0.43738 |
NA | stu0824 | conserved hypothetical protein, translation initiation inhibitor protein | chromosome | CDS | 761099 | 381 | + | 0.396325 |
NA | stu0969 | amidase, truncated | chromosome | CDS | 873649 | 408 | + | 0.419118 |
NA | stu0004 | GTP-binding protein | chromosome | CDS | 3296 | 1116 | + | 0.414875 |
NA | stu0419 | acetyltransferase, GNAT family, truncated | chromosome | CDS | 401775 | 528 | + | 0.414773 |
NA | stu1620 | conserved hypothetical protein | chromosome | CDS | 1435949 | 318 | - | 0.380503 |
NA | stu0370 | ribosomal subunit interface protein, ribosomal protein S30AE family | chromosome | CDS | 357421 | 549 | + | 0.355191 |
NA | stu1559 | acetyltransferase, GNAT family | chromosome | CDS | 1376530 | 588 | - | 0.397959 |
NA | stu1756 | unknown protein | chromosome | CDS | 1564287 | 585 | + | 0.394872 |
NA | stu0343 | ribosomal protein L7A family | chromosome | CDS | 332959 | 303 | + | 0.382838 |
NA | stu0007 | conserved hypothetical protein, S4 domain protein | chromosome | CDS | 8738 | 276 | + | 0.347826 |
NA | stu0585 | conserved hypothetical protein | chromosome | CDS | 554987 | 255 | + | 0.415686 |
NA | stu0420 | acetyltransferase, GNAT family, truncated | chromosome | CDS | 402202 | 270 | + | 0.440741 |
alaS | stu0457 | alanyl-tRNA synthetase | chromosome | CDS | 437624 | 2619 | + | 0.42879 |
ansB | stu1724 | L-asparaginase | chromosome | CDS | 1533718 | 969 | + | 0.453044 |
argS | stu0047 | arginyl-tRNA synthetase | chromosome | CDS | 53012 | 1692 | - | 0.434988 |
asnS | stu0818 | asparaginyl-tRNA synthetase | chromosome | CDS | 758237 | 1347 | + | 0.401633 |
aspS | stu1969 | aspartyl-tRNA synthetase | chromosome | CDS | 1743483 | 1752 | - | 0.40468 |
cysS | stu0084 | cysteinyl-tRNA synthetase | chromosome | CDS | 95662 | 1344 | + | 0.405506 |
deaD | stu1261 | ATP-dependent RNA helicase | chromosome | CDS | 1110742 | 1083 | + | 0.382271 |
defA | stu0431 | polypeptide deformylase | chromosome | CDS | 412421 | 411 | + | 0.377129 |
defB | stu0151 | polypeptide deformylase | chromosome | CDS | 165561 | 615 | - | 0.417886 |
dtd | stu0146 | D-tyrosyl-tRNA(Tyr) deacylase | chromosome | CDS | 161430 | 444 | + | 0.421171 |
efp | stu1740 | translation elongation factor EF-P | chromosome | CDS | 1551923 | 561 | - | 0.393939 |
fmt | stu1428 | methionyl tRNA formyltransferase | chromosome | CDS | 1261937 | 936 | - | 0.451923 |
fus | stu1789 | translation elongation factor G, EF-G | chromosome | CDS | 1593398 | 2082 | - | 0.415946 |
gatA | stu1626 | glutamyl-tRNA Gln amidotransferase subunit A | chromosome | CDS | 1441201 | 1467 | - | 0.453988 |
gatB | stu1625 | glutamyl-tRNA Gln amidotransferase subunit B | chromosome | CDS | 1439759 | 1443 | - | 0.451143 |
gatC | stu1627 | glutamyl-tRNA Gln amidotransferase subunit C | chromosome | CDS | 1442667 | 336 | - | 0.422619 |
gid | stu0903 | glucose-inhibited division protein | chromosome | CDS | 825844 | 1344 | + | 0.418899 |
gltX | stu1814 | glutamyl-tRNA synthetase | chromosome | CDS | 1623708 | 1455 | - | 0.41512 |
glyQ | stu0505 | glycyl-tRNA synthetase alpha subunit | chromosome | CDS | 480610 | 918 | + | 0.446623 |
glyS | stu0507 | glycyl-tRNA synthetase beta subunit | chromosome | CDS | 481703 | 2145 | + | 0.433566 |
hemK | stu0753 | protoporphyrinogen oxidase | chromosome | CDS | 711344 | 834 | + | 0.411271 |
hisS | stu1971 | histidine-tRNA synthetase | chromosome | CDS | 1745774 | 1281 | - | 0.400468 |
ileS | stu0741 | isoleucyl-tRNA synthetase | chromosome | CDS | 699757 | 2790 | + | 0.389247 |
infA | stu1912 | translation initiation factor IF-1 | chromosome | CDS | 1699162 | 219 | - | 0.383562 |
infB | stu0344 | translation initiation factor IF-2 | chromosome | CDS | 333280 | 2832 | + | 0.423729 |
infC | stu1134 | translation initiation factor IF-3 | chromosome | CDS | 996751 | 531 | - | 0.372881 |
ksgA | stu1799 | dimethyladenosine transferase (rRNA methylation) | chromosome | CDS | 1603610 | 873 | - | 0.382589 |
leuS | stu0220 | leucyl-tRNA synthetase | chromosome | CDS | 223185 | 2502 | + | 0.456435 |
lysS | stu0692 | lysyl-tRNA synthetase | chromosome | CDS | 650351 | 1536 | - | 0.435547 |
miaA | stu1177 | tRNA isopentenylpyrophosphate transferase, putative | chromosome | CDS | 1034370 | 990 | - | 0.39596 |
nifR | stu0181 | possible transcriptional regulator | chromosome | CDS | 187655 | 1053 | + | 0.452991 |
papL | stu0425 | tRNA nucleotidyltransferase/poly(A) polymerase | chromosome | CDS | 404716 | 1209 | + | 0.42349 |
pepM | stu1557 | methionine aminopeptidase | chromosome | CDS | 1374353 | 861 | - | 0.420441 |
pheS | stu1294 | phenylalanyl-tRNA synthetase alpha subunit | chromosome | CDS | 1144476 | 1107 | - | 0.411924 |
pnpA | stu0081 | polynucleotide phosphorylase, (PNPase) | chromosome | CDS | 91583 | 2226 | + | 0.434411 |
prfA | stu0752 | peptide chain release factor 1 | chromosome | CDS | 710268 | 1080 | + | 0.435185 |
prfB | stu1146 | peptide chain release factor 2 | chromosome | CDS | 1006415 | 1014 | - | 0.41716 |
prfC | stu1574 | peptide-chain-release factor 3 | chromosome | CDS | 1391796 | 1545 | - | 0.439482 |
prmA | stu0137 | 50S ribosomal protein L11 methyltransferase | chromosome | CDS | 154122 | 954 | + | 0.437107 |
proS | stu0200 | prolyl-tRNA synthetase | chromosome | CDS | 205925 | 1863 | + | 0.416532 |
pth | stu0005 | peptidyl-tRNA hydrolase | chromosome | CDS | 4484 | 570 | + | 0.364912 |
queA | stu0540 | S-adenosylmethionine-tRNAribosyltransferase-isomerase | chromosome | CDS | 511186 | 1044 | - | 0.458812 |
rbfA | stu0345 | ribosome binding factor A | chromosome | CDS | 336205 | 354 | + | 0.378531 |
rheA | stu1568 | ATP-dependent RNA helicase | chromosome | CDS | 1384986 | 1587 | - | 0.444234 |
rheB | stu1699 | ATP-dependent RNA helicase | chromosome | CDS | 1506322 | 1344 | - | 0.416667 |
rimM | stu1419 | 16S rRNA processing protein | chromosome | CDS | 1253387 | 519 | - | 0.385356 |
rluB | stu0262 | ribosomal large subunit pseudouridine synthase B | chromosome | CDS | 262487 | 768 | + | 0.397135 |
rluD | stu0522 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 492801 | 891 | + | 0.472503 |
rnpA | stu1811 | ribonuclease P protein component | chromosome | CDS | 1619472 | 336 | - | 0.366071 |
rplA | stu1817 | 50S ribosomal protein L1 | chromosome | CDS | 1626490 | 741 | - | 0.412955 |
rplB | stu1931 | 50S ribosomal protein L2 | chromosome | CDS | 1708376 | 834 | - | 0.444844 |
rplC | stu1934 | 50S ribosomal protein L3 | chromosome | CDS | 1710171 | 627 | - | 0.414673 |
rplD | stu1933 | 50S ribosomal protein L4 | chromosome | CDS | 1709523 | 624 | - | 0.432692 |
rplE | stu1922 | 50S ribosomal protein L5 | chromosome | CDS | 1704709 | 543 | - | 0.388582 |
rplF | stu1919 | 50S ribosomal protein L6 | chromosome | CDS | 1703322 | 537 | - | 0.392924 |
rplI | stu2000 | 50S ribosomal protein L9 | chromosome | CDS | 1765572 | 501 | - | 0.357285 |
rplJ | stu0536 | 50S ribosomal protein L10 | chromosome | CDS | 505268 | 588 | + | 0.420068 |
rplK | stu1818 | 50S ribosomal protein L11 | chromosome | CDS | 1627279 | 426 | - | 0.420188 |
rplL | stu0537 | 50S ribosomal protein L7/L12 | chromosome | CDS | 505915 | 384 | + | 0.411458 |
rplM | stu0093 | 50S ribosomal protein L13 | chromosome | CDS | 102708 | 447 | + | 0.409396 |
rplN | stu1924 | 50S ribosomal protein L14 | chromosome | CDS | 1705664 | 369 | - | 0.433604 |
rplO | stu1915 | 50S ribosomal protein L15 | chromosome | CDS | 1701598 | 486 | - | 0.407407 |
rplP | stu1927 | 50S ribosomal protein L16 | chromosome | CDS | 1706561 | 414 | - | 0.437198 |
rplQ | stu1907 | 50S ribosomal protein L17 | chromosome | CDS | 1696835 | 387 | - | 0.410853 |
rplR | stu1918 | 50S ribosomal protein L18 | chromosome | CDS | 1702876 | 366 | - | 0.439891 |
rplS | stu1179 | 50S ribosomal protein L19 | chromosome | CDS | 1036465 | 348 | - | 0.436782 |
rplT | stu1132 | 50S ribosomal protein L20 | chromosome | CDS | 996096 | 360 | - | 0.413889 |
rplU | stu0417 | 50S ribosomal protein L21 | chromosome | CDS | 400964 | 426 | + | 0.401408 |
rplV | stu1929 | 50S ribosomal protein L22 | chromosome | CDS | 1707644 | 345 | - | 0.414493 |
rplW | stu1932 | 50S ribosomal protein L23 | chromosome | CDS | 1709227 | 297 | - | 0.363636 |
rplX | stu1923 | 50S ribosomal protein L24 | chromosome | CDS | 1705278 | 306 | - | 0.388889 |
rpmA | stu0418 | 50S ribosomal protein L27 | chromosome | CDS | 401426 | 291 | + | 0.436426 |
rpmB | stu1958 | 50S ribosomal protein L28 | chromosome | CDS | 1734768 | 189 | + | 0.380952 |
rpmC | stu1926 | 50S ribosomal protein L29 | chromosome | CDS | 1706345 | 207 | - | 0.357488 |
rpmD | stu1916 | 50S ribosomal protein L30 | chromosome | CDS | 1702166 | 183 | - | 0.393443 |
rpmE | stu0746 | 50S ribosomal protein L31 | chromosome | CDS | 705146 | 279 | - | 0.390681 |
rpmF | stu1974 | 50S ribosomal protein L32 | chromosome | CDS | 1748727 | 183 | + | 0.409836 |
rpmGA | stu0623 | 50S ribosomal protein L33 | chromosome | CDS | 589963 | 147 | + | 0.340136 |
rpmGB | stu1975 | 50S ribosomal protein L33 | chromosome | CDS | 1748925 | 150 | + | 0.34 |
rpmGC | stu0213 | 50S ribosomal protein L33 | chromosome | CDS | 219627 | 153 | + | 0.385621 |
rpmH | stu1808 | 50S ribosomal protein L34 | chromosome | CDS | 1616468 | 135 | - | 0.451852 |
rpmI | stu1133 | 50S ribosomal protein L35 | chromosome | CDS | 996512 | 201 | - | 0.40796 |
rpmJ | stu1911 | 50S ribosomal protein L36 | chromosome | CDS | 1699020 | 117 | - | 0.367521 |
rpsA | stu0592 | 30S ribosomal protein S1 | chromosome | CDS | 563493 | 1254 | + | 0.405104 |
rpsB | stu0073 | 30S ribosomal protein S2 | chromosome | CDS | 82947 | 768 | + | 0.416667 |
rpsC | stu1928 | 30S ribosomal protein S3 | chromosome | CDS | 1706978 | 654 | - | 0.432722 |
rpsD | stu1997 | 30S ribosomal protein S4 | chromosome | CDS | 1763032 | 654 | - | 0.40367 |
rpsE | stu1917 | 30S ribosomal protein S5 | chromosome | CDS | 1702363 | 495 | - | 0.444444 |
rpsF | stu1754 | 30S ribosomal protein S6 | chromosome | CDS | 1563408 | 339 | - | 0.40118 |
rpsG | stu1790 | 30S ribosomal protein S7 | chromosome | CDS | 1595700 | 471 | - | 0.43949 |
rpsH | stu1920 | 30S ribosomal protein S8 | chromosome | CDS | 1703985 | 399 | - | 0.380952 |
rpsI | stu0094 | 30S ribosomal protein S9 | chromosome | CDS | 103182 | 393 | + | 0.458015 |
rpsJ | stu1935 | 30S ribosomal protein S10 | chromosome | CDS | 1710914 | 309 | - | 0.414239 |
rpsK | stu1909 | 30S ribosomal protein S11 | chromosome | CDS | 1698226 | 384 | - | 0.440104 |
rpsL | stu1791 | 30S ribosomal protein S12 | chromosome | CDS | 1596189 | 414 | - | 0.427536 |
rpsM | stu1910 | 30S ribosomal protein S13 | chromosome | CDS | 1698637 | 366 | - | 0.42623 |
rpsN | stu1921 | 30S ribosomal protein S14 | chromosome | CDS | 1704506 | 186 | - | 0.430108 |
rpsO | stu0154 | 30S ribosomal protein S15 | chromosome | CDS | 168334 | 270 | + | 0.42963 |
rpsP | stu1548 | 30S ribosomal protein S16 | chromosome | CDS | 1364688 | 273 | - | 0.388278 |
rpsQ | stu1925 | 30S ribosomal protein S17 | chromosome | CDS | 1706057 | 261 | - | 0.37931 |
rpsR | stu1752 | 30S ribosomal protein S18 | chromosome | CDS | 1562597 | 240 | - | 0.4 |
rpsS | stu1930 | 30S ribosomal protein S19 | chromosome | CDS | 1708004 | 279 | - | 0.387097 |
rpsT | stu0798 | 30S ribosomal protein S20 | chromosome | CDS | 743774 | 252 | - | 0.384921 |
rpsU | stu1490 | 30S ribosomal protein S21 | chromosome | CDS | 1314377 | 207 | - | 0.376812 |
rrf | stu0439 | ribosome recycling factor | chromosome | CDS | 419752 | 558 | + | 0.399642 |
rsuA1 | stu0553 | ribosomal small subunit pseudouridine synthase A | chromosome | CDS | 522116 | 720 | + | 0.436111 |
rsuA2 | stu1505 | ribosomal small subunit pseudouridine synthase A | chromosome | CDS | 1328254 | 732 | - | 0.434426 |
serS | stu0329 | seryl-tRNA synthetase | chromosome | CDS | 319973 | 1341 | - | 0.41909 |
spoU | stu0247 | rRNA methyltransferase | chromosome | CDS | 251933 | 738 | + | 0.424119 |
sunL | stu1427 | RNA-binding protein | chromosome | CDS | 1260625 | 1332 | - | 0.429429 |
tgt | stu1806 | queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) | chromosome | CDS | 1614422 | 1143 | - | 0.405949 |
thrS | stu0572 | threonyl-tRNA synthetase 1 | chromosome | CDS | 540521 | 1947 | + | 0.427838 |
trmD | stu1418 | tRNA (guanine-N1)-methyltransferase | chromosome | CDS | 1252678 | 720 | - | 0.433333 |
trmH | stu0088 | tRNA/rRNA methyltransferase | chromosome | CDS | 98463 | 744 | + | 0.426075 |
trmU | stu2003 | tRNA-(5-methylaminomethyl-2-thiouridylate)methyl transferase | chromosome | CDS | 1770246 | 1122 | - | 0.398396 |
trpS | stu2018 | tryptophanyl-tRNA synthetase | chromosome | CDS | 1786129 | 1023 | - | 0.387097 |
truA | stu0122 | tRNA pseudouridine synthase A (pseudouridylate synthase I) | chromosome | CDS | 126700 | 747 | + | 0.409639 |
truB | stu0995 | tRNA pseudouridine synthase B | chromosome | CDS | 893792 | 882 | + | 0.418367 |
tsf | stu0074 | translation elongation factor Ts | chromosome | CDS | 83810 | 1056 | + | 0.404356 |
tufA | stu0487 | translation elongation factor EF-Tu | chromosome | CDS | 467189 | 1197 | + | 0.438596 |
tyrS | stu1870 | tyrosyl-tRNA synthetase | chromosome | CDS | 1670239 | 1317 | + | 0.420653 |
tyrSE | stu1043 | tyrosyl-tRNA synthetase E | chromosome | CDS | 931927 | 909 | - | 0.319032 |
valS | stu0477 | valyl-tRNA synthetase | chromosome | CDS | 456184 | 2706 | + | 0.443089 |