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2024-05-14 00:48:06

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 170

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Geobacillus kaustophilus HTA426, HTA426
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
GK0016 GK0016 hypothetical conserved proteinchromosome CDS26394 498 + 0.540161
GK0035 GK0035 dimethyladenosine transferasechromosome CDS48732 882 + 0.522676
GK0041 GK0041 translation initiation inhibitorchromosome CDS53553 375 + 0.512
GK0052 GK0052 hypothetical conserved proteinchromosome CDS66159 282 + 0.514184
GK0053 GK0053 hypothetical conserved proteinchromosome CDS66542 327 + 0.480122
GK0056 GK0056 polyribonucleotide nucleotidyltransferasechromosome CDS68004 399 + 0.526316
GK0073 GK0073 transcriptional regulator involved in nitrogen regulation (NifR3/Smm1 family)chromosome CDS84906 1002 + 0.513972
GK0074 GK0074 lysyl-tRNA synthetase (lysine--tRNA ligase)chromosome CDS85998 1485 + 0.509764
GK0083 GK0083 glutamyl-tRNA synthetase (glutamate--tRNA ligase)chromosome CDS103876 1473 + 0.530889
GK0085 GK0085 cysteinyl-tRNA synthetasechromosome CDS106369 1401 + 0.525339
GK0087 GK0087 tRNA/rRNA methyltransferasechromosome CDS108201 738 + 0.589431
GK0097 GK0097 hypothetical conserved proteinchromosome CDS113939 786 + 0.507634
GK0100 GK0100 ribosomal protein (L7AE family)chromosome CDS122537 249 + 0.502008
GK0128 GK0128 methionine aminopeptidase (Peptidase M)chromosome CDS138820 768 + 0.53125
GK0138 GK0138 pseudouridylate synthaseIchromosome CDS145018 777 + 0.550837
GK0226 GK0226 ATP-dependent RNA helicasechromosome CDS238745 1404 + 0.546296
GK0281 GK0281 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Glu-ADT subunit C)chromosome CDS308438 291 + 0.515464
GK0282 GK0282 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (Glu-ADT subunit A)chromosome CDS308741 1458 + 0.543896
GK0283 GK0283 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B)chromosome CDS310212 1431 + 0.528302
GK0322 GK0322 hypothetical proteinchromosome CDS355570 225 - 0.52
GK0342 GK0342 RNA methyltransferasechromosome CDS375484 1374 + 0.588064
GK0357 GK0357 RNA methyltransferasechromosome CDS396133 1389 + 0.553636
GK0360 GK0360 nucleoside-diphosphate-sugar pyrophosphorylasechromosome CDS400161 1044 + 0.545019
GK0403 GK0403 hypothetical proteinchromosome CDS449777 654 + 0.478593
GK0429 GK0429 RNA methyltransferasechromosome CDS471669 1389 + 0.566595
GK0450 GK0450 hypothetical conserved proteinchromosome CDS492942 555 - 0.515315
GK0468 GK0468 hypothetical conserved proteinchromosome CDS507592 534 + 0.47191
GK0484 GK0484 rRNA methylasechromosome CDS531556 474 + 0.478903
GK0565 GK0565 ribosomal large subunit pseudouridine synthasechromosome CDS590328 900 - 0.564444
GK0638 GK0638 hypothetical conserved proteinchromosome CDS660053 1077 - 0.552461
GK0831 GK0831 hypothetical conserved proteinchromosome CDS858059 912 + 0.591009
GK0864 GK0864 hypothetical conserved proteinchromosome CDS881597 522 - 0.517241
GK0876 GK0876 hypothetical proteinchromosome CDS891688 252 - 0.269841
GK0915 GK0915 hypothetical proteinchromosome CDS940392 465 + 0.511828
GK0933 GK0933 hypothetical conserved proteinchromosome CDS955822 1068 + 0.520599
GK0949 GK0949 translation initiation factor eIF-2B alpha subunitchromosome CDS969709 1068 - 0.575843
GK1009 GK1009 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1035332 1113 + 0.395328
GK1057 GK1057 peptide deformylase2 (PDF 2) N-formylmethionylaminoacyl-tRNA deformylasechromosome CDS1082033 555 - 0.56036
GK1089 GK1089 hypothetical conserved proteinchromosome CDS1112991 360 - 0.483333
GK1146 GK1146 hypothetical conserved proteinchromosome CDS1164420 915 + 0.584699
GK1173 GK1173 RNA-binding Sun proteinchromosome CDS1193601 1335 + 0.594757
GK1200 GK1200 16S rRNA processing proteinchromosome CDS1220071 528 + 0.528409
GK1201 GK1201 tRNA (guanine-N(1)-)-methyltransferase (M1G-methyltransferase)chromosome CDS1220598 735 + 0.545578
GK1252 GK1252 ribosome recycling factorchromosome CDS1265126 558 + 0.519713
GK1262 GK1262 ribosomal protein (L7AE family)chromosome CDS1278089 309 + 0.585761
GK1265 GK1265 ribosome-binding factor Achromosome CDS1280964 339 + 0.551622
GK1266 GK1266 tRNA pseudouridine 5S synthasechromosome CDS1281357 858 + 0.582751
GK1269 GK1269 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)chromosome CDS1283786 2172 + 0.554788
GK1303 GK1303 hypothetical conserved proteinchromosome CDS1323513 1596 + 0.513158
GK1312 GK1312 tRNA delta(2)-isopentenylpyrophosphate transferase (IPP transferase)chromosome CDS1335966 948 + 0.581224
GK1391 GK1391 acetamidase/formamidasechromosome CDS1422127 1305 - 0.528736
GK1392 GK1392 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS1423826 1413 + 0.457891
GK1833 GK1833 methionyl aminopeptidasechromosome CDS1862692 750 + 0.549333
GK1970 GK1970 hypothetical conserved proteinchromosome CDS2014485 1335 - 0.480899
GK2181 GK2181 tRNA nucleotidyltransferasechromosome CDS2225447 1215 - 0.594239
GK2225 GK2225 30S ribosomal protein S1chromosome CDS2264403 1164 - 0.554124
GK2233 GK2233 L-asparaginase (L-asparagine amidohydrolase)chromosome CDS2271175 972 - 0.552469
GK2281 GK2281 cytochrome c biogenesis proteinchromosome CDS2315435 1665 - 0.532733
GK2283 GK2283 ribosomal large subunit pseudouridine synthaseB (pseudouridylate synthase) (uracil hydrolyase)chromosome CDS2317780 732 - 0.565574
GK2391 GK2391 hypothetical conserved proteinchromosome CDS2423279 849 - 0.558304
GK2450 GK2450 50S ribosomal protein L33chromosome CDS2475502 150 - 0.453333
GK2475 GK2475 ATP-dependent RNA helicasechromosome CDS2495822 1311 - 0.53013
GK2494 GK2494 stage IV sporulation proteinchromosome CDS2513677 1188 - 0.538721
GK2500 GK2500 hypothetical conserved proteinchromosome CDS2517841 1350 - 0.545926
GK2502 GK2502 ribosomal protein L11 methyltransferasechromosome CDS2520061 939 - 0.531416
GK2523 GK2523 hypothetical conserved proteinchromosome CDS2541126 294 - 0.527211
GK2563 GK2563 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2575277 1116 - 0.549283
GK2573 GK2573 histidyl-tRNA synthetasechromosome CDS2587618 1281 - 0.576112
GK2577 GK2577 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS2591974 459 - 0.56427
GK2587 GK2587 tRNA-guanine transglycosylasechromosome CDS2604010 1143 - 0.56343
GK2588 GK2588 S-adenosylmethionine tRNA ribosyltransferasechromosome CDS2605170 1029 - 0.552964
GK2609 GK2609 hypothetical conserved proteinchromosome CDS2623698 330 - 0.578788
GK2638 GK2638 valyl-tRNA synthetasechromosome CDS2652884 2643 - 0.553159
GK2666 GK2666 ribonuclease PHchromosome CDS2687130 774 - 0.577519
GK2707 GK2707 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS2731049 1035 - 0.565217
GK2709 GK2709 rRNA methylasechromosome CDS2732886 756 - 0.59127
GK2829 GK2829 hypothetical conserved proteinchromosome CDS2856453 579 - 0.604491
GK2833 GK2833 16S pseudouridylate synthasechromosome CDS2860274 747 - 0.555556
GK2923 GK2923 hypothetical conserved proteinchromosome CDS2956938 552 - 0.541667
GK2927 GK2927 polyribonucleotide nucleotidyltransferasechromosome CDS2961131 366 - 0.521858
GK2930 GK2930 hypothetical conserved proteinchromosome CDS2963326 264 - 0.590909
GK2935 GK2935 hypothetical proteinchromosome CDS2967188 438 + 0.525114
GK3104 GK3104 hypothetical conserved protein in Tn5401chromosome CDS3126893 261 - 0.48659
GK3106 GK3106 peptide chain release factor 2 in translationchromosome CDS3127491 984 - 0.539634
GK3109 GK3109 ribosomal protein S30EAchromosome CDS3132017 552 - 0.496377
GK3125 GK3125 methionyl-tRNA formyltransferasechromosome CDS3146679 900 - 0.315556
GK3173 GK3173 hypothetical proteinchromosome CDS3198409 741 - 0.553306
GK3253 GK3253 hypothetical conserved proteinchromosome CDS3289824 1419 - 0.555321
GK3278 GK3278 hypothetical proteinchromosome CDS3320909 474 + 0.523207
GK3375 GK3375 hypothetical conserved proteinchromosome CDS3413833 1050 - 0.630476
GK3377 GK3377 protoporphyrinogen oxidasechromosome CDS3415953 882 - 0.605442
GK3378 GK3378 peptide chain release factor 1 (RF-1) in translationchromosome CDS3416824 1077 - 0.543175
GK3401 GK3401 arginyl-tRNA synthetasechromosome CDS3443334 1674 - 0.551374
GK3430 GK3430 glycyl-tRNA synthetasechromosome CDS3468603 1383 - 0.550253
GK3460 GK3460 rRNA methylasechromosome CDS3503101 744 - 0.532258
GK3483 GK3483 hypothetical conserved proteinchromosome CDS3529009 1101 - 0.540418
alaS GK2556 alanyl-tRNA synthetasechromosome CDS2567130 2664 - 0.564565
asnS GK2171 asparaginyl-tRNA synthetasechromosome CDS2215638 1296 - 0.546296
aspS GK2572 aspartyl-tRNA synthetasechromosome CDS2585841 1773 - 0.577552
def GK1171 polypeptide deformylasechromosome CDS1192175 474 + 0.565401
efp GK2410 translation elongation factor Pchromosome CDS2438306 558 - 0.532258
fmt GK1172 methionyl-tRNA formyltransferasechromosome CDS1192655 960 + 0.583333
fus GK0103 translation elongation factor G (EF-G)chromosome CDS123995 2079 + 0.527658
ileS GK1136 isoleucyl-tRNA synthetasechromosome CDS1153728 2775 + 0.563604
infA GK0129 translation initiation factor IF-Ichromosome CDS139683 219 + 0.479452
infB GK1263 translation initiation factor IF-2chromosome CDS1278411 2130 + 0.52723
infC GK2718 translation initiation factor IF-3chromosome CDS2737991 720 - 0.522222
leuS GK2842 leucyl-tRNA synthetasechromosome CDS2867413 2418 - 0.55335
proS GK1257 proline-tRNA synthetasechromosome CDS1269791 1704 + 0.566315
rnpA GK3497 ribonuclease P (protein component)chromosome CDS3543806 366 - 0.497268
rplA GK0094 50S ribosomal protein L1chromosome CDS112126 702 + 0.521368
rplB GK0109 50S ribosomal protein L2chromosome CDS129624 831 + 0.525872
rplC GK0106 50S ribosomal protein L3chromosome CDS128015 642 + 0.503115
rplD GK0107 50S ribosomal protein L4chromosome CDS128686 624 + 0.511218
rplE GK0118 50S ribosomal protein L5chromosome CDS133496 540 + 0.516667
rplF GK0121 50S ribosomal protein L6chromosome CDS134715 537 + 0.528864
rplI GK3477 50S ribosomal protein L9 (BL17)chromosome CDS3524117 450 - 0.497778
rplJ GK0095 50S ribosomal protein L10chromosome CDS113086 501 + 0.536926
rplK GK0093 50S ribosomal protein L11 (BL11)chromosome CDS111520 426 + 0.521127
rplL GK0096 50S ribosomal protein L7/L12 (BL13)chromosome CDS113638 372 + 0.491935
rplM GK0139 50S ribosomal protein L13chromosome CDS145974 438 + 0.497717
rplN GK0116 50S ribosomal protein L14chromosome CDS132752 369 + 0.517615
rplO GK0125 50S ribosomal protein L15chromosome CDS136394 441 + 0.519274
rplP GK0113 50S ribosomal protein L16chromosome CDS131789 426 + 0.514085
rplQ GK0134 50S ribosomal protein L17chromosome CDS142048 363 + 0.550964
rplR GK0122 50S ribosomal protein L18chromosome CDS135285 363 + 0.493113
rplS GK1202 50S ribosomal protein L19chromosome CDS1221465 363 + 0.559229
rplT GK2716 50S ribosomal protein L20chromosome CDS2737392 360 - 0.541667
rplU GK2610 50S ribosomal protein L21chromosome CDS2624030 309 - 0.469256
rplV GK0111 50S ribosomal protein L22chromosome CDS130785 342 + 0.502924
rplW GK0108 50S ribosomal protein L23chromosome CDS129309 288 + 0.461806
rplX GK0117 50S ribosomal protein L24chromosome CDS133157 312 + 0.490385
rplY GK0045 50S ribosomal protein L25chromosome CDS56890 633 + 0.540284
rpmA GK2608 50S ribosomal protein L27 (BL30)chromosome CDS2623392 291 - 0.57732
rpmB GK1181 50S ribosomal protein L28chromosome CDS1201324 186 - 0.526882
rpmC GK0114 50S ribosomal protein L29chromosome CDS132214 201 + 0.467662
rpmD GK0124 50S ribosomal protein L30chromosome CDS136181 189 + 0.507937
rpmE GK3381 50S ribosomal protein L31chromosome CDS3419559 201 - 0.477612
rpmF GK1105 50S ribosomal protein L32 (Ribosomal protein I) (BL37)chromosome CDS1124474 174 + 0.5
rpmG GK0090 50S ribosomal protein L33chromosome CDS110267 150 + 0.48
rpmH GK3498 50S ribosomal protein L34chromosome CDS3544251 135 - 0.525926
rpmI GK2717 50S ribosomal protein L35chromosome CDS2737777 201 - 0.462687
rpmJ GK0130 50S ribosomal protein L36chromosome CDS139938 114 + 0.403509
rpsB GK1249 30S ribosomal protein S2chromosome CDS1262583 708 + 0.5
rpsC GK0112 30S ribosomal protein S3 (BS2)chromosome CDS131130 657 + 0.52968
rpsD GK2802 30S ribosomal protein S4chromosome CDS2828404 603 + 0.538972
rpsE GK0123 30S ribosomal protein S5chromosome CDS135667 501 + 0.526946
rpsF GK3482 30S ribosomal protein S6 (BS9)chromosome CDS3528507 288 - 0.489583
rpsG GK0102 30S ribosomal protein S7 (BS7)chromosome CDS123344 471 + 0.492569
rpsH GK0120 30S ribosomal protein S8chromosome CDS134290 393 + 0.493639
rpsI GK0140 30S ribosomal protein S9chromosome CDS146432 393 + 0.572519
rpsJ GK0105 30S ribosomal protein S10 (BS13)chromosome CDS127686 309 + 0.453074
rpsK GK0132 30S ribosomal protein S11chromosome CDS140463 390 + 0.551282
rpsL GK0101 30S ribosomal protein S12chromosome CDS122882 423 + 0.520095
rpsM GK0131 30S ribosomal protein S13chromosome CDS140072 366 + 0.505464
rpsN GK0119 30S ribosomal protein S14chromosome CDS134065 186 + 0.5
rpsO GK1268 30S ribosomal protein S15chromosome CDS1283376 270 + 0.481481
rpsP GK1197 30S ribosomal protein S16chromosome CDS1219069 273 + 0.490842
rpsQ GK0115 30S ribosomal protein S17chromosome CDS132439 264 + 0.454545
rpsR GK3480 30S ribosomal protein S18 (BS21)chromosome CDS3527648 237 - 0.531646
rpsS GK0110 30S ribosomal protein S19 (BS19)chromosome CDS130488 279 + 0.512545
rpsT GK2512 30S ribosomal protein S20chromosome CDS2532216 270 + 0.474074
rpsU GK2497 30S ribosomal protein S21chromosome CDS2515742 174 - 0.477012
serS GK0013 seryl-tRNA synthetasechromosome CDS21813 1275 + 0.545098
spoVC GK0046 stage V sporulation protein C (peptidyl-tRNA hydrolase)chromosome CDS57583 561 + 0.527629
thrS GK2719 threonyl-tRNA synthetasechromosome CDS2738930 1959 - 0.548749
trpS GK0809 tryptophan-tRNA synthetasechromosome CDS837178 987 - 0.545086
tsf GK1250 translation elongation factor Ts (EF-Ts)chromosome CDS1263448 885 + 0.525424
tufA GK0104 translation elongation factor Tu (EF-Tu)chromosome CDS126202 1188 + 0.540404
tyrS GK2803 tyrosyl-tRNA synthetase (tyrosine--tRNA ligase)chromosome CDS2829053 1260 - 0.554762