Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 174
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Bacillus halodurans C-125, C-125 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
BH0033 | Cu binding protein (Mn oxidation) | chromosome | CDS | 45912 | 480 | + | 0.489583 | |
BH0063 | translation initiation inhibitor | chromosome | CDS | 79446 | 375 | + | 0.429333 | |
BH0073 | chromosome | CDS | 92524 | 267 | + | 0.378277 | ||
BH0077 | chromosome | CDS | 94333 | 414 | + | 0.480676 | ||
BH0097 | transcriptional regulator involved in nitrogen regulation (NifR3/Smm1 family) | chromosome | CDS | 114382 | 1005 | + | 0.456716 | |
BH0113 | tRNA/rRNA methyltransferase | chromosome | CDS | 147029 | 750 | + | 0.478667 | |
BH0124 | chromosome | CDS | 154630 | 606 | + | 0.435644 | ||
BH0128 | ribosomal protein L7AE family | chromosome | CDS | 163022 | 249 | + | 0.437751 | |
BH0157 | chromosome | CDS | 180746 | 309 | + | 0.404531 | ||
BH0208 | chromosome | CDS | 224153 | 1380 | - | 0.457246 | ||
BH0380 | rRNA adenine N-6-methyltransferase | chromosome | CDS | 410049 | 855 | + | 0.45614 | |
BH0409 | 50S ribosomal protein L11 | chromosome | CDS | 434704 | 426 | + | 0.457746 | |
BH0443 | chromosome | CDS | 470914 | 537 | - | 0.443203 | ||
BH0585 | ribosomal-protein (S5)-alanine N-acetyltransferase | chromosome | CDS | 618452 | 549 | + | 0.455373 | |
BH0665 | glutamyl-tRNA (Gln) amidotransferase subunit C | chromosome | CDS | 718070 | 291 | + | 0.439863 | |
BH0666 | glutamyl-tRNA (Gln) amidotransferase subunit A | chromosome | CDS | 718379 | 1458 | + | 0.477366 | |
BH0667 | glutamyl-tRNA (Gln) amidotransferase subunit B | chromosome | CDS | 719850 | 1431 | + | 0.452131 | |
BH0687 | RNA methyltransferase | chromosome | CDS | 742108 | 1377 | + | 0.514887 | |
BH0699 | ribosomal-protein-alanine N-acetyltransferase | chromosome | CDS | 756124 | 573 | + | 0.413613 | |
BH0834 | arginine-tRNA ligase | chromosome | CDS | 907272 | 1686 | + | 0.464413 | |
BH0835 | chromosome | CDS | 909020 | 930 | - | 0.456989 | ||
BH0837 | chromosome | CDS | 911009 | 594 | + | 0.457912 | ||
BH0897 | RNA methyltransferase | chromosome | CDS | 969567 | 1392 | + | 0.456897 | |
BH0923 | chromosome | CDS | 995400 | 555 | - | 0.414414 | ||
BH0940 | chromosome | CDS | 1006435 | 528 | + | 0.433712 | ||
BH0959 | chromosome | CDS | 1029777 | 240 | + | 0.525 | ||
BH0984 | chromosome | CDS | 1061258 | 372 | - | 0.475806 | ||
BH1243 | chromosome | CDS | 1336759 | 441 | + | 0.469388 | ||
BH1261 | (5-methylaminomethyl-2-thiouridylate)-methyltran sferase | chromosome | CDS | 1356310 | 1116 | + | 0.454301 | |
BH1300 | chromosome | CDS | 1391125 | 543 | - | 0.423573 | ||
BH1325 | chromosome | CDS | 1412273 | 291 | + | 0.42268 | ||
BH1349 | methyltransferase | chromosome | CDS | 1435748 | 942 | + | 0.444798 | |
BH1351 | chromosome | CDS | 1437457 | 1347 | + | 0.437268 | ||
BH1385 | ATP-dependent RNA helicase | chromosome | CDS | 1468884 | 1317 | + | 0.464692 | |
BH1439 | chromosome | CDS | 1525612 | 516 | - | 0.406977 | ||
BH1498 | chromosome | CDS | 1575112 | 531 | + | 0.446328 | ||
BH1567 | chromosome | CDS | 1646170 | 420 | + | 0.433333 | ||
BH1624 | L-asparaginase | chromosome | CDS | 1697790 | 969 | - | 0.463364 | |
BH1868 | chromosome | CDS | 1947169 | 492 | - | 0.420732 | ||
BH1961 | chromosome | CDS | 2057108 | 528 | + | 0.410985 | ||
BH2121 | chromosome | CDS | 2249800 | 546 | - | 0.362637 | ||
BH2200 | tryptophanyl-tRNA synthetase | chromosome | CDS | 2321179 | 999 | - | 0.441441 | |
BH2211 | S-adenosylmethionine tRNA ribosyltransferase | chromosome | CDS | 2334900 | 1011 | + | 0.476756 | |
BH2268 | chromosome | CDS | 2393246 | 324 | - | 0.398148 | ||
BH2372 | chromosome | CDS | 2490224 | 1617 | - | 0.453927 | ||
BH2384 | ATP-dependent RNA helicase | chromosome | CDS | 2504383 | 1620 | - | 0.44321 | |
BH2414 | chromosome | CDS | 2536295 | 306 | - | 0.477124 | ||
BH2480 | 16S rRNA processing protein | chromosome | CDS | 2599535 | 522 | - | 0.484674 | |
BH2507 | chromosome | CDS | 2625642 | 1353 | - | 0.498152 | ||
BH2542 | chromosome | CDS | 2666826 | 918 | - | 0.444444 | ||
BH2598 | chromosome | CDS | 2718945 | 774 | + | 0.425065 | ||
BH2621 | chromosome | CDS | 2738606 | 594 | - | 0.410774 | ||
BH2658 | formylmethionine deformylase | chromosome | CDS | 2779760 | 549 | + | 0.431694 | |
BH2685 | chromosome | CDS | 2805740 | 456 | + | 0.39693 | ||
BH2753 | chromosome | CDS | 2876774 | 363 | - | 0.371901 | ||
BH2778 | hemolysin-like protein | chromosome | CDS | 2904971 | 819 | - | 0.438339 | |
BH2847 | chromosome | CDS | 2967754 | 909 | - | 0.471947 | ||
BH2881 | chromosome | CDS | 2997893 | 1284 | + | 0.44704 | ||
BH3010 | chromosome | CDS | 3128497 | 342 | - | 0.453216 | ||
BH3085 | chromosome | CDS | 3201005 | 387 | + | 0.416021 | ||
BH3112 | rRNA methylase | chromosome | CDS | 3231931 | 756 | - | 0.44709 | |
BH3270 | ABC transporter (permease) | chromosome | CDS | 3391097 | 561 | - | 0.477718 | |
BH3273 | 16S pseudouridylate synthase | chromosome | CDS | 3394989 | 717 | - | 0.478382 | |
BH3324 | glucose-1-phosphate thymidylyltransferase | chromosome | CDS | 3446140 | 1392 | + | 0.373563 | |
BH3347 | polyribonucleotide nucleotidyltransferase (general stress protein 13) | chromosome | CDS | 3464132 | 417 | - | 0.429257 | |
BH3348 | RNA helicase | chromosome | CDS | 3464647 | 1170 | - | 0.453846 | |
BH3608 | ribosomal protein S30AE family | chromosome | CDS | 3712723 | 564 | - | 0.382979 | |
BH3771 | chromosome | CDS | 3891275 | 1047 | - | 0.4766 | ||
BH3774 | protoporphyrinogen oxidase | chromosome | CDS | 3893703 | 870 | - | 0.491954 | |
BH3931 | chromosome | CDS | 4068886 | 516 | - | 0.449612 | ||
BH4051 | GTP-binding protein | chromosome | CDS | 4187296 | 1101 | - | 0.464124 | |
alaS | alanyl-tRNA synthetase | chromosome | CDS | 1363112 | 2640 | + | 0.4625 | |
argS | arginyl-tRNA synthetase | chromosome | CDS | 3929619 | 1671 | - | 0.458408 | |
asnS | asparaginyl-tRNA synthetase | chromosome | CDS | 1769439 | 1293 | + | 0.450889 | |
aspS | aspartyl-tRNA synthetase | chromosome | CDS | 1346950 | 1788 | + | 0.458613 | |
cafA | ribonuclease G (cytosolic axial filament protein) | chromosome | CDS | 3129849 | 1503 | - | 0.453094 | |
cspR | rRNA methylase | chromosome | CDS | 1103057 | 474 | + | 0.411392 | |
cysS | cysteinyl-tRNA synthetase | chromosome | CDS | 145207 | 1401 | + | 0.442541 | |
efp | translation elongation factor EF-P | chromosome | CDS | 2922269 | 558 | - | 0.405018 | |
fmt | methionyl-tRNA formyltransferase | chromosome | CDS | 2626984 | 954 | - | 0.493711 | |
frr | ribosome recycling factor | chromosome | CDS | 2549173 | 558 | - | 0.442652 | |
fus | translation elongation factor G (EF-G) | chromosome | CDS | 164433 | 2079 | + | 0.44252 | |
gid | glucose-inhibited division protein | chromosome | CDS | 2583641 | 1308 | - | 0.456422 | |
gltX | glutamyl-tRNA synthetase | chromosome | CDS | 142707 | 1458 | + | 0.450617 | |
glyQ | glycyl-tRNA synthetase alpha chain | chromosome | CDS | 1454086 | 894 | + | 0.455257 | |
glyS | glycyl-tRNA synthetase beta chain | chromosome | CDS | 1454966 | 2082 | + | 0.431796 | |
hisS | histidyl-tRNA synthetase | chromosome | CDS | 1345667 | 1287 | + | 0.465423 | |
ileS | isoleucyl-tRNA synthetase | chromosome | CDS | 2669352 | 2766 | - | 0.463124 | |
infA | translation initiation factor IF-1 | chromosome | CDS | 181059 | 219 | + | 0.406393 | |
infB | translation initiation factor IF-2 | chromosome | CDS | 2534087 | 2193 | - | 0.463748 | |
infC | translation initiation factor IF-3 | chromosome | CDS | 3253648 | 573 | - | 0.465969 | |
ksgA | dimethyladenosine transferase | chromosome | CDS | 74689 | 870 | + | 0.463218 | |
leuS | leucyl-tRNA synthetase | chromosome | CDS | 3403502 | 2421 | - | 0.470467 | |
lysS | lysyl-tRNA synthetase | chromosome | CDS | 115500 | 1506 | + | 0.445551 | |
map | methionine aminopeptidase | chromosome | CDS | 179981 | 747 | + | 0.464525 | |
miaA | tRNA isopentenylpyrophosphate transferase | chromosome | CDS | 2482322 | 945 | - | 0.451852 | |
mpg | mannose-1-phosphate guanyltransferase | chromosome | CDS | 1502918 | 750 | + | 0.466667 | |
papS | poly(A) polymerase | chromosome | CDS | 1755648 | 1128 | + | 0.472518 | |
pheS | phenylalanyl-tRNA synthetase alpha subunit | chromosome | CDS | 3230468 | 1035 | - | 0.469565 | |
pnpA | polynucleotide phosphorylase | chromosome | CDS | 2528771 | 2115 | - | 0.453901 | |
prfA | peptide chain release factor 1 in translation | chromosome | CDS | 3894577 | 1071 | - | 0.462185 | |
prfB | peptide chain release factor 2 in translation | chromosome | CDS | 3708315 | 867 | - | 0.431373 | |
proS | prolyl-tRNA synthetase | chromosome | CDS | 2543227 | 1710 | - | 0.481287 | |
queA | S-adenosylmethionine tRNA ribosyltransferase | chromosome | CDS | 1319158 | 1044 | + | 0.468391 | |
rbfA | ribosome-binding factor A | chromosome | CDS | 2533431 | 351 | - | 0.410256 | |
rluB | pseudouridylate synthase | chromosome | CDS | 1652121 | 729 | + | 0.452675 | |
rnpA | ribonuclease P | chromosome | CDS | 4201777 | 360 | - | 0.438889 | |
rph | ribonuclease PH | chromosome | CDS | 3189639 | 774 | - | 0.468992 | |
rplA | 50S ribosomal protein L1 | chromosome | CDS | 151120 | 696 | + | 0.426724 | |
rplB | 50S ribosomal protein L2 | chromosome | CDS | 170720 | 831 | + | 0.463297 | |
rplC | 50S ribosomal protein L3 | chromosome | CDS | 169126 | 630 | + | 0.453968 | |
rplD | 50S ribosomal protein L4 | chromosome | CDS | 169778 | 624 | + | 0.448718 | |
rplE | 50S ribosomal protein L5 | chromosome | CDS | 174630 | 540 | + | 0.418519 | |
rplF | 50S ribosomal protein L6 | chromosome | CDS | 175843 | 537 | + | 0.443203 | |
rplI | 50S ribosomal protein L9 | chromosome | CDS | 4167140 | 444 | - | 0.412162 | |
rplJ | 50S ribosomal protein L10 | chromosome | CDS | 152084 | 498 | + | 0.459839 | |
rplK | 50S ribosomal protein L11 | chromosome | CDS | 150574 | 426 | + | 0.455399 | |
rplL | 50S ribosomal protein L7/L12 | chromosome | CDS | 152640 | 366 | + | 0.428962 | |
rplM | 50S ribosomal protein L13 | chromosome | CDS | 187536 | 438 | + | 0.452055 | |
rplN | 50S ribosomal protein L14 | chromosome | CDS | 173877 | 369 | + | 0.466125 | |
rplO | 50S ribosomal protein L15 | chromosome | CDS | 177527 | 441 | + | 0.45805 | |
rplP | 50S ribosomal protein L16 | chromosome | CDS | 172929 | 435 | + | 0.455172 | |
rplQ | 50S ribosomal protein L17 | chromosome | CDS | 183474 | 363 | + | 0.482094 | |
rplR | 50S ribosomal protein L18 | chromosome | CDS | 176411 | 363 | + | 0.46832 | |
rplS | 50S ribosomal protein L19 | chromosome | CDS | 2598317 | 345 | - | 0.443478 | |
rplT | 50S ribosomal protein L20 | chromosome | CDS | 3253017 | 360 | - | 0.411111 | |
rplU | 50S ribosomal protein L21 | chromosome | CDS | 3128847 | 309 | - | 0.401294 | |
rplV | 50S ribosomal protein L22 | chromosome | CDS | 171922 | 342 | + | 0.432749 | |
rplW | 50S ribosomal protein L23 | chromosome | CDS | 170401 | 291 | + | 0.415808 | |
rplX | 50S ribosomal protein L24 | chromosome | CDS | 174292 | 312 | + | 0.413462 | |
rplY | 50S ribosomal protein L25 | chromosome | CDS | 83118 | 648 | + | 0.455247 | |
rpmA | 50S ribosomal protein L27 | chromosome | CDS | 3128207 | 285 | - | 0.452632 | |
rpmB | 50S ribosomal protein L28 | chromosome | CDS | 2619230 | 189 | + | 0.47619 | |
rpmC | 50S ribosomal protein L29 | chromosome | CDS | 173353 | 204 | + | 0.392157 | |
rpmD | 50S ribosomal protein L30 | chromosome | CDS | 177307 | 189 | + | 0.444444 | |
rpmE | 50S ribosomal protein L31 | chromosome | CDS | 3899358 | 246 | - | 0.402439 | |
rpmF | 50S ribosomal protein L32 | chromosome | CDS | 2707246 | 174 | - | 0.396552 | |
rpmG | 50S ribosomal protein L33 | chromosome | CDS | 149174 | 150 | + | 0.46 | |
rpmH | 50S ribosomal protein L34 | chromosome | CDS | 4202201 | 138 | - | 0.405797 | |
rpmI | 50S ribosomal protein L35 | chromosome | CDS | 3253410 | 201 | - | 0.422886 | |
rpmJ | 50S ribosomal protein L36 | chromosome | CDS | 181345 | 114 | + | 0.412281 | |
rpsB | 30S ribosomal protein S2 | chromosome | CDS | 2551662 | 735 | - | 0.446259 | |
rpsC | 30S ribosomal protein S3 | chromosome | CDS | 172267 | 660 | + | 0.440909 | |
rpsD | 30S ribosomal protein S4 | chromosome | CDS | 3326455 | 603 | + | 0.45937 | |
rpsE | 30S ribosomal protein S5 | chromosome | CDS | 176793 | 501 | + | 0.48503 | |
rpsF | 30S ribosomal protein S6 | chromosome | CDS | 4186737 | 288 | - | 0.420139 | |
rpsG | 30S ribosomal protein S7 | chromosome | CDS | 163853 | 471 | + | 0.460722 | |
rpsH | 30S ribosomal protein S8 | chromosome | CDS | 175413 | 399 | + | 0.421053 | |
rpsI | 30S ribosomal protein S9 | chromosome | CDS | 187989 | 393 | + | 0.486005 | |
rpsJ | 30S ribosomal protein S10 | chromosome | CDS | 168749 | 309 | + | 0.417476 | |
rpsK | 30S ribosomal protein S11 | chromosome | CDS | 181865 | 390 | + | 0.479487 | |
rpsL | 30S ribosomal protein S12 | chromosome | CDS | 163387 | 420 | + | 0.47381 | |
rpsM | 30S ribosomal protein S13 | chromosome | CDS | 181481 | 366 | + | 0.464481 | |
rpsN | 30S ribosomal protein S14 | chromosome | CDS | 175198 | 186 | + | 0.430108 | |
rpsO | 30S ribosomal protein S15 | chromosome | CDS | 2531029 | 270 | - | 0.411111 | |
rpsP | 30S ribosomal protein S16 | chromosome | CDS | 2600807 | 273 | - | 0.417582 | |
rpsQ | 30S ribosomal protein S17 | chromosome | CDS | 173580 | 261 | + | 0.390805 | |
rpsR | 30S ribosomal protein S18 | chromosome | CDS | 4185890 | 234 | - | 0.444444 | |
rpsS | 30S ribosomal protein S19 | chromosome | CDS | 171611 | 279 | + | 0.419355 | |
rpsT | 30S ribosomal protein S20 | chromosome | CDS | 1423793 | 276 | - | 0.394928 | |
rpsU | 30S ribosomal protein S21 | chromosome | CDS | 1440817 | 174 | + | 0.431034 | |
serS | seryl-tRNA synthetase | chromosome | CDS | 34678 | 1278 | + | 0.467136 | |
spoVC | stage V sporulation protein C (peptidyl-tRNA hydrolase) | chromosome | CDS | 83931 | 558 | + | 0.464158 | |
tgt | tRNA-guanine transglycosylase | chromosome | CDS | 1320237 | 1140 | + | 0.446491 | |
thrS | threonyl-tRNA synthetase 1 | chromosome | CDS | 3254488 | 1938 | - | 0.461816 | |
trmD | tRNA methyltransferase | chromosome | CDS | 2598798 | 741 | - | 0.506073 | |
trpS | tryptophanyl-tRNA synthetase | chromosome | CDS | 2988489 | 993 | + | 0.448137 | |
truA | tRNA pseudouridine synthase A (pseudouridylate synthase I) | chromosome | CDS | 186596 | 792 | + | 0.501263 | |
truB | tRNA pseudouridine 5S synthase | chromosome | CDS | 2532415 | 915 | - | 0.465574 | |
tsf | elongation factor Ts | chromosome | CDS | 2550611 | 882 | - | 0.444444 | |
tufA | translation elongation factor Tu (EF-Tu) | chromosome | CDS | 166636 | 1191 | + | 0.458438 | |
tyrZ | tyrosyl-tRNA synthetase | chromosome | CDS | 3342401 | 1239 | - | 0.448749 | |
valS | valyl-tRNA synthetase | chromosome | CDS | 3152514 | 2643 | - | 0.444571 | |
ypfD | 30S ribosomal protein S1 | chromosome | CDS | 1712758 | 1152 | + | 0.447917 |