Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 119
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
alaS | alanyl-tRNA synthetase | chromosome | CDS | 440103 | 2637 | + | 0.24763 | |
argS | arginyl-tRNA synthetase | chromosome | CDS | 271888 | 1725 | - | 0.263768 | |
asnS | asparaginyl-tRNA synthetase | chromosome | CDS | 392443 | 1401 | - | 0.289079 | |
aspS | aspartyl-tRNA synthetase | chromosome | CDS | 349274 | 1761 | + | 0.247587 | |
cca | tRNA nucleotidyltransferase | chromosome | CDS | 66272 | 1245 | + | 0.26506 | |
cysS | cysteinyl-tRNA synthetase | chromosome | CDS | 536790 | 1395 | - | 0.25233 | |
deaD | ATP-dependent RNA helicase deaD | chromosome | CDS | 409362 | 1806 | - | 0.330011 | |
def | polypeptide deformylase | chromosome | CDS | 544994 | 522 | + | 0.247126 | |
efp | elongation factor P | chromosome | CDS | 20985 | 612 | + | 0.271242 | |
fmt | methionyl-tRNA formyltransferase | chromosome | CDS | 545523 | 945 | + | 0.268783 | |
frr | ribosome recycling factor | chromosome | CDS | 258051 | 558 | + | 0.268817 | |
ftsJ | cell division protein ftsJ | chromosome | CDS | 424252 | 621 | - | 0.273752 | |
fusA | elongation factor G | chromosome | CDS | 561787 | 2109 | - | 0.336178 | |
glnS | glutaminyl-tRNA synthetase | chromosome | CDS | 449495 | 1716 | + | 0.253496 | |
gltX | glutamyl-tRNA synthetase | chromosome | CDS | 74771 | 1404 | + | 0.263533 | |
glyQ | glycyl-tRNA synthetase alpha chain | chromosome | CDS | 142235 | 969 | - | 0.272446 | |
glyS | glycyl-tRNA synthetase beta chain | chromosome | CDS | 140188 | 2073 | - | 0.23396 | |
gshB | glutathione synthetase | chromosome | CDS | 583707 | 963 | + | 0.284528 | |
hemK | hemK protein | chromosome | CDS | 185620 | 834 | + | 0.258993 | |
hisS | histidyl-tRNA synthetase | chromosome | CDS | 315404 | 1272 | + | 0.249214 | |
ileS | isoleucyl-tRNA synthetase | chromosome | CDS | 156645 | 2823 | - | 0.266029 | |
infA | translation initiation factor IF-1 | chromosome | CDS | 348887 | 219 | + | 0.30137 | |
infB | translation initiation factor IF-2 | chromosome | CDS | 415631 | 2595 | - | 0.285164 | |
infC | translation initiation factor IF-3 | chromosome | CDS | 132392 | 540 | + | 0.32037 | |
ksgA | dimethyladenosine transferase | chromosome | CDS | 147408 | 822 | + | 0.22871 | |
leuS | leucyl-tRNA synthetase | chromosome | CDS | 483881 | 2580 | + | 0.263178 | |
lysS | lysyl-tRNA synthetase | chromosome | CDS | 476393 | 1521 | + | 0.25904 | |
map | methionine aminopeptidase | chromosome | CDS | 254517 | 795 | - | 0.272956 | |
metG | methionyl-tRNA synthetase | chromosome | CDS | 113965 | 1644 | + | 0.252433 | |
miaA | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 601487 | 909 | - | 0.258526 | |
pheS | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 133809 | 990 | + | 0.253535 | |
pnp | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 411548 | 2124 | - | 0.327684 | |
prfA | peptide chain release factor 1 | chromosome | CDS | 184538 | 1086 | + | 0.308471 | |
prfB | peptide chain release factor 2 | chromosome | CDS | 475334 | 1050 | + | 0.284762 | |
prfC | peptide chain release factor 3 | chromosome | CDS | 576996 | 1581 | - | 0.280202 | |
proS | prolyl-tRNA synthetase | chromosome | CDS | 266472 | 1719 | - | 0.254218 | |
pth | peptidyl-tRNA hydrolase | chromosome | CDS | 205262 | 534 | + | 0.250936 | |
queA | S-adenosylmethionine:tRNAribosyltransferase-isom erase | chromosome | CDS | 137550 | 1074 | + | 0.277467 | |
rbfA | ribosome-binding factor A | chromosome | CDS | 415223 | 363 | - | 0.23416 | |
rimM | 16s rRNA processing protein rimm | chromosome | CDS | 433588 | 531 | + | 0.218456 | |
rluC | ribosomal large subunit pseudouridine synthase C | chromosome | CDS | 382339 | 945 | + | 0.259259 | |
rluD | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 438095 | 939 | - | 0.292865 | |
rne | ribonuclease E | chromosome | CDS | 379296 | 2709 | - | 0.262458 | |
rnpA | ribonuclease P protein component | chromosome | CDS | 14525 | 348 | + | 0.247126 | |
rplA | 50S ribosomal protein L1 | chromosome | CDS | 46069 | 696 | - | 0.297414 | |
rplB | 50S ribosomal protein L2 | chromosome | CDS | 557474 | 822 | - | 0.345499 | |
rplC | 50S ribosomal protein L3 | chromosome | CDS | 559232 | 630 | - | 0.325397 | |
rplD | 50S ribosomal protein L4 | chromosome | CDS | 558609 | 606 | - | 0.326733 | |
rplE | 50S ribosomal protein L5 | chromosome | CDS | 553832 | 540 | - | 0.322222 | |
rplF | 50S ribosomal protein L6 | chromosome | CDS | 552541 | 573 | - | 0.312391 | |
rplI | 50S ribosomal protein L9 | chromosome | CDS | 594138 | 453 | - | 0.282561 | |
rplJ | 50S ribosomal protein L10 | chromosome | CDS | 45306 | 498 | - | 0.287149 | |
rplK | 50S ribosomal protein L11 | chromosome | CDS | 46767 | 429 | - | 0.296037 | |
rplL | 50S ribosomal protein L7/L12 | chromosome | CDS | 44871 | 369 | - | 0.317073 | |
rplM | 50S ribosomal protein L13 | chromosome | CDS | 429864 | 429 | - | 0.286713 | |
rplN | 50S ribosomal protein L14 | chromosome | CDS | 554726 | 369 | - | 0.344173 | |
rplO | 50S ribosomal protein L15 | chromosome | CDS | 551024 | 435 | - | 0.328736 | |
rplP | 50S ribosomal protein L16 | chromosome | CDS | 555657 | 411 | - | 0.36253 | |
rplQ | 50S ribosomal protein L17 | chromosome | CDS | 546594 | 393 | - | 0.305344 | |
rplR | 50S ribosomal protein L18 | chromosome | CDS | 552171 | 369 | - | 0.325203 | |
rplS | 50S ribosomal protein L19 | chromosome | CDS | 434945 | 348 | + | 0.301724 | |
rplT | 50S ribosomal protein L20 | chromosome | CDS | 133258 | 357 | + | 0.322129 | |
rplU | 50S ribosomal protein L21 | chromosome | CDS | 427642 | 327 | + | 0.256881 | |
rplV | 50S ribosomal protein L22 | chromosome | CDS | 556808 | 333 | - | 0.336336 | |
rplW | 50S ribosomal protein L23 | chromosome | CDS | 558310 | 303 | - | 0.254125 | |
rplX | 50S ribosomal protein L24 | chromosome | CDS | 554386 | 315 | - | 0.260317 | |
rplY | 50S ribosomal protein L25 | chromosome | CDS | 144748 | 288 | + | 0.267361 | |
rpmA | 50S ribosomal protein L27 | chromosome | CDS | 427973 | 255 | + | 0.32549 | |
rpmB | 50S ribosomal protein L28 | chromosome | CDS | 87332 | 228 | - | 0.27193 | |
rpmC | 50S ribosomal protein L29 | chromosome | CDS | 555460 | 198 | - | 0.277778 | |
rpmD | 50S ribosomal protein L30 | chromosome | CDS | 551463 | 180 | - | 0.277778 | |
rpmE | 50S ribosomal protein L31 | chromosome | CDS | 611349 | 219 | - | 0.283105 | |
rpmF | 50S ribosomal protein L32 | chromosome | CDS | 383329 | 165 | + | 0.309091 | |
rpmG | 50S ribosomal protein L33 | chromosome | CDS | 87154 | 168 | - | 0.255952 | |
rpmH | 50S ribosomal protein L34 | chromosome | CDS | 14369 | 144 | + | 0.319444 | |
rpmI | 50S ribosomal protein L35 | chromosome | CDS | 133018 | 198 | + | 0.287879 | |
rpmJ | 50S ribosomal protein L36 | chromosome | CDS | 549558 | 117 | - | 0.316239 | |
rpsA | 30S ribosomal protein S1 | chromosome | CDS | 341201 | 1677 | - | 0.304114 | |
rpsB | 30S ribosomal protein S2 | chromosome | CDS | 255574 | 735 | + | 0.287075 | |
rpsC | 30S ribosomal protein S3 | chromosome | CDS | 556088 | 702 | - | 0.347578 | |
rpsD | 30S ribosomal protein S4 | chromosome | CDS | 548049 | 621 | - | 0.304348 | |
rpsE | 30S ribosomal protein S5 | chromosome | CDS | 551652 | 504 | - | 0.347222 | |
rpsF | 30S ribosomal protein S6 | chromosome | CDS | 594992 | 342 | - | 0.269006 | |
rpsG | 30S ribosomal protein S7 | chromosome | CDS | 564010 | 471 | - | 0.352442 | |
rpsH | 30S ribosomal protein S8 | chromosome | CDS | 553088 | 393 | - | 0.312977 | |
rpsI | 30S ribosomal protein S9 | chromosome | CDS | 429451 | 393 | - | 0.351145 | |
rpsJ | 30S ribosomal protein S10 | chromosome | CDS | 559892 | 312 | - | 0.36859 | |
rpsK | 30S ribosomal protein S11 | chromosome | CDS | 548695 | 396 | - | 0.368687 | |
rpsL | 30S ribosomal protein S12 | chromosome | CDS | 564522 | 375 | - | 0.357333 | |
rpsM | 30S ribosomal protein S13 | chromosome | CDS | 549108 | 357 | - | 0.308123 | |
rpsN | 30S ribosomal protein S14 | chromosome | CDS | 553509 | 306 | - | 0.356209 | |
rpsO | 30S ribosomal protein S15 | chromosome | CDS | 413873 | 270 | - | 0.244444 | |
rpsP | 30S ribosomal protein S16 | chromosome | CDS | 433347 | 240 | + | 0.3125 | |
rpsQ | 30S ribosomal protein S17 | chromosome | CDS | 555209 | 252 | - | 0.293651 | |
rpsR | 30S ribosomal protein S18 | chromosome | CDS | 594639 | 228 | - | 0.315789 | |
rpsS | 30S ribosomal protein S19 | chromosome | CDS | 557176 | 279 | - | 0.293907 | |
rpsT | 30S ribosomal protein S20 | chromosome | CDS | 160640 | 270 | + | 0.27037 | |
rpsU | 30S ribosomal protein S21 | chromosome | CDS | 62755 | 216 | - | 0.37963 | |
serS | seryl-tRNA synthetase | chromosome | CDS | 346190 | 1284 | - | 0.278037 | |
smpA | small protein A | chromosome | CDS | 202263 | 309 | + | 0.203883 | |
tgt | queuine tRNA-ribosyltransferase | chromosome | CDS | 138664 | 1113 | + | 0.267745 | |
thrS | threonyl-tRNA synthetase | chromosome | CDS | 130460 | 1929 | + | 0.271125 | |
trmD | tRNA (guanine-n1)-methyltransferase | chromosome | CDS | 434133 | 714 | + | 0.295518 | |
trmU | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | chromosome | CDS | 286436 | 1179 | + | 0.251908 | |
trpS | tryptophanyl-tRNA synthetase | chromosome | CDS | 570134 | 1008 | - | 0.262897 | |
truA | pseudouridylate synthase I | chromosome | CDS | 215390 | 801 | + | 0.29588 | |
truB | tRNA pseudouridine 55 synthase | chromosome | CDS | 414247 | 939 | - | 0.268371 | |
tsf | elongation factor Ts | chromosome | CDS | 256385 | 807 | + | 0.288724 | |
tufB | elongation factor EF-Tu | chromosome | CDS | 560535 | 1272 | - | 0.349057 | |
tyrS | tyrosyl-tRNA synthetase | chromosome | CDS | 125936 | 1269 | + | 0.263199 | |
valS | valyl-tRNA synthetase | chromosome | CDS | 401601 | 2868 | - | 0.251743 | |
ychF | GTP-binding protein | chromosome | CDS | 205836 | 1089 | + | 0.251607 | |
yciL | hypothetical protein | chromosome | CDS | 307521 | 753 | + | 0.26162 | |
yfhC | hypothetical protein yfhC | chromosome | CDS | 280870 | 486 | + | 0.286008 | |
yhaR | hypothetical protein | chromosome | CDS | 408889 | 387 | + | 0.235142 | |
yjeA | hypothetical lysyl-tRNA synthetase homolog | chromosome | CDS | 615562 | 975 | - | 0.253333 | |
yjjT | hypothetical protein | chromosome | CDS | 363663 | 843 | + | 0.250297 | |
yleA | hypothetical protein | chromosome | CDS | 481012 | 1320 | + | 0.273485 | |
yrdC | hypothetical protein | chromosome | CDS | 543652 | 528 | - | 0.276515 |