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2024-05-19 06:01:42

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 170

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MCA0950 amidase family proteinchromosome CDS993263 1026 + 0.670565
NA MCA2838 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS3029398 561 - 0.702317
NA MCA1313 tRNA pseudouridine synthase B, interruption-Nchromosome CDS1402824 675 - 0.641481
NA MCA1669 TIM-barrel protein, yjbN familychromosome CDS1772860 1083 + 0.640813
NA MCA1711 conserved hypothetical proteinchromosome CDS1826597 1311 + 0.630816
NA MCA0938 conserved domain proteinchromosome CDS981768 459 + 0.620915
NA MCA1311 tRNA pseudouridine synthase B, interruption-Cchromosome CDS1401244 369 - 0.677507
NA MCA1591 hypothetical proteinchromosome CDS1698123 147 + 0.741497
NA MCA1119 general secretory pathway protein Jchromosome CDS1173976 603 + 0.655058
NA MCA2864 putative ribosomal protein S6 modification proteinchromosome CDS3058170 927 + 0.678533
NA MCA0548 RNA pseudouridine synthase family proteinchromosome CDS568423 597 - 0.705193
NA MCA0518 glutamyl-tRNA synthetase domain proteinchromosome CDS535883 909 + 0.682068
NA MCA0701 modification methylase, HemK familychromosome CDS737364 966 + 0.662526
NA MCA0599 nucleotidyltransferase family proteinchromosome CDS631703 699 - 0.686695
NA MCA1850 conserved hypothetical protein TIGR00253chromosome CDS1985866 291 + 0.611684
NA MCA0128 peptidyl-tRNA hydrolase domain proteinchromosome CDS133709 420 + 0.67619
NA MCA2795 putative phenylpyruvate tautomerasechromosome CDS2985865 345 - 0.605797
NA MCA1306 DnaK-related proteinchromosome CDS1394584 2856 + 0.679272
NA MCA1771 hypothetical proteinchromosome CDS1902159 339 - 0.654867
NA MCA1974 initiation factor 2 subunit family proteinchromosome CDS2123952 1059 - 0.672332
NA MCA2610 RNA methyltransferase, TrmH family, group 1chromosome CDS2799932 744 + 0.659946
NA MCA2205 RNA pseudouridine synthase family proteinchromosome CDS2381731 696 - 0.673851
NA MCA1439 conserved domain proteinchromosome CDS1530894 1464 + 0.678962
NA MCA2539 RNA methyltransferase, TrmH family, group 2chromosome CDS2713937 480 - 0.6875
NA MCA1011 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1060280 1362 + 0.668135
NA MCA2641 conserved hypothetical proteinchromosome CDS2825925 480 + 0.685417
NA MCA2209 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS2384709 624 - 0.636218
NA MCA2306 tRNA nucleotidyltransferase/poly(A) polymerase family proteinchromosome CDS2501360 1011 - 0.670623
NA MCA1574 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1671149 1500 + 0.635333
NA MCA0386 putative 2'-5' RNA ligasechromosome CDS391340 573 + 0.642234
NA MCA1745 TIM-barrel protein, yjbN familychromosome CDS1861552 984 + 0.652439
NA MCA1130 metallo-beta-lactamase family proteinchromosome CDS1186649 1359 + 0.662252
NA MCA2032 GTP-binding protein YchFchromosome CDS2180108 1092 - 0.615385
NA MCA1262 hypothetical proteinchromosome CDS1344687 414 + 0.492754
NA MCA1498 zinc-binding domain proteinchromosome CDS1596078 495 + 0.640404
NA MCA2024 putative endoribonuclease L-PSPchromosome CDS2173313 387 + 0.627907
NA MCA0082 MiaB-like tRNA modifying enzyme YliGchromosome CDS85707 1314 - 0.656012
NA MCA1293 ribonuclease, T2 familychromosome CDS1378705 948 - 0.654008
NA MCA1459 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS1550502 1377 - 0.605664
NA MCA0549 RNA methyltransferase, TrmH familychromosome CDS569026 849 + 0.722026
NA MCA1031 putative ribosomal subunit interface proteinchromosome CDS1083145 360 - 0.563889
NA MCA2671 conserved hypothetical proteinchromosome CDS2851834 375 + 0.68
NA MCA1319 conserved hypothetical protein TIGR00462chromosome CDS1409473 990 - 0.644444
NA MCA1975 RNA methyltransferase, TrmH family, group 3chromosome CDS2125114 753 - 0.667995
NA MCA2681 hypothetical proteinchromosome CDS2862062 1185 - 0.562025
alaS MCA0389 alanyl-tRNA synthetasechromosome CDS393475 2604 + 0.660906
argS MCA3089 arginyl-tRNA synthetasechromosome CDS3274549 1761 + 0.636002
aspS MCA1776 aspartyl-tRNA synthetasechromosome CDS1906356 1800 - 0.635
cafA MCA0379 ribonuclease Gchromosome CDS381015 1455 + 0.643299
cca MCA0022 tRNA nucleotidyltransferasechromosome CDS21053 1278 - 0.714397
cdd MCA1307 cytosine deaminasechromosome CDS1397475 438 + 0.63242
ctc MCA1057 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5chromosome CDS1108163 609 + 0.586207
cysS MCA0509 cysteinyl-tRNA synthetasechromosome CDS522065 1398 - 0.635908
def-1 MCA1371 polypeptide deformylasechromosome CDS1460092 576 - 0.675347
def-2 MCA2843 polypeptide deformylasechromosome CDS3035164 537 + 0.599628
dtD MCA1743 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS1860098 462 + 0.69697
efp MCA1320 translation elongation factor Pchromosome CDS1410452 567 - 0.594356
fmt MCA2844 methionyl-tRNA formyltransferasechromosome CDS3035787 927 + 0.682848
frr MCA0570 ribosome recycling factorchromosome CDS599501 558 + 0.607527
fusA-1 MCA0544 translation elongation factor Gchromosome CDS560144 2085 - 0.621103
fusA-2 MCA2375 translation elongation factor Gchromosome CDS2554750 2097 - 0.604673
gatA MCA0098 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS104842 1458 - 0.670782
gatB MCA0097 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS103385 1431 - 0.633823
gatC MCA0099 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS106353 288 - 0.652778
gltX-1 MCA0510 glutamyl-tRNA synthetasechromosome CDS523464 1401 - 0.673091
gltX-2 MCA1234 glutamyl-tRNA synthetasechromosome CDS1299444 1407 + 0.609097
glyQ MCA2049 glycyl-tRNA synthetase, alpha subunitchromosome CDS2202857 930 + 0.650538
glyS MCA2050 glycyl-tRNA synthetase, beta subunitchromosome CDS2203779 2082 + 0.660423
gshB MCA2338 glutathione synthetasechromosome CDS2531910 969 - 0.624355
hemK MCA1050 protein methyltransferase HemKchromosome CDS1100344 855 - 0.661988
hisS MCA2889 histidyl-tRNA synthetasechromosome CDS3079946 1269 + 0.64145
hslR MCA1817 heat shock protein 15chromosome CDS1948997 426 + 0.647887
ileS MCA2253 isoleucyl-tRNA synthetasechromosome CDS2442054 2820 + 0.655319
infA MCA1790 translation initiation factor IF-1chromosome CDS1920603 219 - 0.502283
infB MCA1315 translation initiation factor IF-2chromosome CDS1403876 2607 - 0.634062
ksgA MCA0604 dimethyladenosine transferasechromosome CDS639111 774 + 0.642119
leuS MCA1453 leucyl-tRNA synthetasechromosome CDS1543151 2664 - 0.623498
lysS MCA0301 lysyl-tRNA synthetasechromosome CDS296343 1491 - 0.625084
map MCA0566 methionine aminopeptidase, type Ichromosome CDS595921 786 - 0.590331
miaA MCA1691 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1808868 939 - 0.668797
pcnB MCA2312 polyA polymerasechromosome CDS2505619 1317 + 0.617312
pheS MCA0697 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS732350 1026 + 0.62963
pnp MCA1309 polyribonucleotide nucleotidyltransferasechromosome CDS1398752 2076 - 0.636802
prfA MCA1051 peptide chain release factor 1chromosome CDS1101203 1083 - 0.638966
prfB MCA0302 peptide chain release factor 2, programmed frameshiftchromosome CDS297838 1099 - 0.609645
prfC MCA1990 peptide chain release factor 3chromosome CDS2139224 1581 - 0.614801
prmA MCA1047 ribosomal protein L11 methyltransferasechromosome CDS1097482 882 + 0.664399
proS MCA2013 prolyl-tRNA synthetasechromosome CDS2161701 1752 + 0.651256
pth MCA1058 peptidyl-tRNA hydrolasechromosome CDS1108785 564 + 0.618794
queA MCA0688 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS718203 1044 - 0.640805
rbfA MCA1314 ribosome-binding factor Achromosome CDS1403504 360 - 0.633333
rimM MCA0393 16S rRNA processing protein RimMchromosome CDS398203 519 + 0.631985
rluA MCA1592 ribosomal large subunit pseudouridine synthase Achromosome CDS1698383 639 - 0.638498
rluC MCA1479 ribosomal large subunit pseudouridine synthase Cchromosome CDS1572164 951 - 0.657203
rluD MCA0972 ribosomal large subunit pseudouridine synthase Dchromosome CDS1015882 1005 + 0.662687
rnd MCA2378 ribonuclease Dchromosome CDS2558241 1167 + 0.634105
rne MCA1481 ribonuclease Echromosome CDS1573769 2658 + 0.648984
rnpA MCA3035 ribonuclease P protein componentchromosome CDS3221405 387 + 0.630491
rph MCA3024 ribonuclease PHchromosome CDS3208367 732 - 0.662568
rplA MCA1063 ribosomal protein L1chromosome CDS1112593 696 + 0.622126
rplB MCA2369 ribosomal protein L2chromosome CDS2550749 846 - 0.605201
rplC MCA2372 ribosomal protein L3chromosome CDS2552529 636 - 0.627358
rplD MCA2371 ribosomal protein L4chromosome CDS2551901 618 - 0.588997
rplE MCA2360 ribosomal protein L5chromosome CDS2547227 540 - 0.537037
rplF MCA2357 ribosomal protein L6chromosome CDS2545926 534 - 0.597378
rplI MCA2035 ribosomal protein L9chromosome CDS2183996 447 - 0.615213
rplJ MCA1064 ribosomal protein L10chromosome CDS1113506 528 + 0.638258
rplK MCA1062 ribosomal protein L11chromosome CDS1112162 432 + 0.592593
rplL MCA1065 ribosomal protein L7/L12chromosome CDS1114073 378 + 0.584656
rplM MCA0904 ribosomal protein L13chromosome CDS949633 429 + 0.575758
rplN MCA2362 ribosomal protein L14chromosome CDS2548126 369 - 0.558266
rplO MCA2353 ribosomal protein L15chromosome CDS2544413 435 - 0.650575
rplP MCA2365 ribosomal protein L16chromosome CDS2548990 414 - 0.577295
rplQ MCA2346 ribosomal protein L17chromosome CDS2540081 360 - 0.588889
rplR MCA2356 ribosomal protein L18chromosome CDS2545562 354 - 0.621469
rplS MCA0395 ribosomal protein L19chromosome CDS399498 345 + 0.614493
rplT MCA0696 ribosomal protein L20chromosome CDS731925 348 + 0.635057
rplU MCA2246 ribosomal protein L21chromosome CDS2436270 312 + 0.580128
rplV MCA2367 ribosomal protein L22chromosome CDS2550111 333 - 0.567568
rplW MCA2370 ribosomal protein L23chromosome CDS2551611 294 - 0.537415
rplX MCA2361 ribosomal protein L24chromosome CDS2547781 318 - 0.556604
rpmA MCA2247 ribosomal protein L27chromosome CDS2436602 258 + 0.670543
rpmB MCA2339 ribosomal protein L28chromosome CDS2532982 237 + 0.556962
rpmC MCA2364 ribosomal protein L29chromosome CDS2548796 198 - 0.560606
rpmD MCA2354 ribosomal protein L30chromosome CDS2544849 186 - 0.510753
rpmE MCA0322 ribosomal protein L31chromosome CDS317030 204 + 0.553922
rpmF MCA2005 ribosomal protein L32chromosome CDS2153492 195 - 0.610256
rpmG MCA2340 ribosomal protein L33chromosome CDS2533236 156 + 0.480769
rpmH MCA3034 ribosomal protein L34chromosome CDS3221271 135 + 0.659259
rpmI MCA0695 ribosomal protein L35chromosome CDS731689 198 + 0.631313
rpmJ MCA2351 ribosomal protein L36chromosome CDS2542947 114 - 0.508772
rpsA MCA1413 ribosomal protein S1chromosome CDS1498659 1668 - 0.59952
rpsB MCA0567 ribosomal protein S2chromosome CDS596940 771 + 0.59144
rpsC MCA2366 ribosomal protein S3chromosome CDS2549416 672 - 0.590774
rpsD MCA2348 ribosomal protein S4chromosome CDS2541472 621 - 0.582931
rpsE MCA2355 ribosomal protein S5chromosome CDS2545040 510 - 0.623529
rpsF MCA2038 ribosomal protein S6chromosome CDS2185728 387 - 0.664083
rpsG MCA2376 ribosomal protein S7chromosome CDS2556889 471 - 0.59448
rpsH MCA2358 ribosomal protein S8chromosome CDS2546481 396 - 0.588384
rpsI MCA0905 ribosomal protein S9chromosome CDS950078 393 + 0.608142
rpsJ MCA2373 ribosomal protein S10chromosome CDS2553202 312 - 0.580128
rpsK MCA2349 ribosomal protein S11chromosome CDS2542106 387 - 0.578811
rpsL MCA2377 ribosomal protein S12chromosome CDS2557378 375 - 0.613333
rpsM MCA2350 ribosomal protein S13chromosome CDS2542508 357 - 0.588235
rpsN MCA2359 ribosomal protein S14chromosome CDS2546908 306 - 0.614379
rpsO MCA1310 ribosomal protein S15chromosome CDS1400859 270 - 0.588889
rpsP MCA0392 ribosomal protein S16chromosome CDS397949 255 + 0.6
rpsQ MCA2363 ribosomal protein S17chromosome CDS2548539 261 - 0.586207
rpsR MCA2037 ribosomal protein S18chromosome CDS2185441 231 - 0.575758
rpsS MCA2368 ribosomal protein S19chromosome CDS2550457 273 - 0.549451
rpsT MCA2250 ribosomal protein S20chromosome CDS2439112 279 - 0.591398
rpsU MCA2991 ribosomal protein S21chromosome CDS3164223 234 + 0.598291
rrmJ MCA1849 ribosomal RNA large subunit methyltransferase Jchromosome CDS1985184 633 - 0.635071
rumA MCA1898 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS2044378 1332 - 0.647898
serS MCA1971 seryl-tRNA synthetasechromosome CDS2121755 1284 - 0.640187
smpA MCA2622 small protein Achromosome CDS2809121 486 - 0.602881
sun MCA2845 sun proteinchromosome CDS3036710 1296 + 0.668981
tgt MCA0681 queuine tRNA-ribosyltransferasechromosome CDS712124 1113 + 0.644205
thrS MCA0693 threonyl-tRNA synthetasechromosome CDS729200 1917 + 0.621283
trmD MCA0394 tRNA (guanine-N1)-methyltransferasechromosome CDS398738 756 + 0.660053
trmU MCA1785 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1915436 1116 - 0.637097
trpS MCA2526 tryptophanyl-tRNA synthetasechromosome CDS2701155 1017 - 0.619469
truA MCA2497 tRNA pseudouridine synthase Achromosome CDS2678274 816 - 0.658088
tsf MCA0568 translation elongation factor Tschromosome CDS597803 882 + 0.626984
tuf-1 MCA1059 translation elongation factor Tuchromosome CDS1109771 1191 + 0.631402
tuf-2 MCA2374 translation elongation factor Tuchromosome CDS2553518 1191 - 0.633081
tyrS MCA0749 tyrosyl-tRNA synthetasechromosome CDS786655 1194 + 0.579565
valS MCA2097 valyl-tRNA synthetasechromosome CDS2254440 2766 - 0.648952
yfhC MCA0289 zinc-binding domain proteinchromosome CDS280836 414 - 0.671498
yfiA MCA0740 ribosomal subunit interface proteinchromosome CDS780162 297 - 0.552189