Gene list
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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 186
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Clostridium acetobutylicum ATCC 824, ATCC 824 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
CAC0017 | Seryl-tRNA synthetase | chromosome | CDS | 24976 | 1278 | + | 0.326291 | |
CAC0021 | Seryl-tRNA synthetase (serine-tRNA ligase) | chromosome | CDS | 30670 | 1275 | + | 0.341176 | |
CAC0123 | Cytosine deaminase | chromosome | CDS | 134203 | 444 | + | 0.353604 | |
CAC0152 | Ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S5) | chromosome | CDS | 156963 | 939 | + | 0.275825 | |
CAC0311 | PolyA polymerase | chromosome | CDS | 364518 | 1377 | + | 0.283951 | |
CAC0369 | Predicted acetyltransferase | chromosome | CDS | 429193 | 513 | - | 0.31384 | |
CAC0523 | SAM-dependent methyltransferase related to tRNA(uracyl-5-)-methyltransferase (trmA family) | chromosome | CDS | 602657 | 1383 | + | 0.316703 | |
CAC0626 | Tryptophan-tRNA synthetase, trpS | chromosome | CDS | 728417 | 1032 | + | 0.330426 | |
CAC0630 | Peptide chain ralease factor 3 (RF-3) | chromosome | CDS | 732465 | 1581 | + | 0.342821 | |
CAC0637 | Tyrosyl-tRNA synthetase | chromosome | CDS | 741074 | 1224 | + | 0.349673 | |
CAC0644 | Spore germination protein gerKA | chromosome | CDS | 748749 | 1404 | + | 0.325499 | |
CAC0646 | Leucyl-tRNA synthetase | chromosome | CDS | 751312 | 2439 | - | 0.340303 | |
CAC0700 | Predicted tRNA-methylase (SpoU class) | chromosome | CDS | 809418 | 483 | + | 0.331263 | |
CAC0778 | ATP-dependent RNA helicase, superfamily II | chromosome | CDS | 900231 | 1758 | + | 0.319113 | |
CAC0780 | Tyrosyl-tRNA synthetase | chromosome | CDS | 903118 | 1203 | + | 0.300083 | |
CAC0784 | ATP-dependent RNA helicase, superfamily II | chromosome | CDS | 906689 | 1125 | - | 0.344 | |
CAC0854 | Tetracycline resistance protein tetP, contain GTP-ase domain | chromosome | CDS | 983126 | 1935 | + | 0.315245 | |
CAC0990 | Glutamyl-tRNA synthetase | chromosome | CDS | 1137161 | 1458 | - | 0.321674 | |
CAC1015 | Pseudouridylate synthase | chromosome | CDS | 1163299 | 957 | + | 0.306165 | |
CAC1041 | Arginyl-tRNA synthetase | chromosome | CDS | 1191581 | 1692 | + | 0.325059 | |
CAC1060 | Predicted membrane protein | chromosome | CDS | 1213984 | 318 | + | 0.235849 | |
CAC1077 | Putative translation initiation inhibitor | chromosome | CDS | 1229341 | 357 | + | 0.32493 | |
CAC1153 | Hypothetical protein | chromosome | CDS | 1318341 | 252 | + | 0.222222 | |
CAC1256 | Ribonucleases G/E family protein | chromosome | CDS | 1401341 | 1446 | + | 0.289073 | |
CAC1257 | Ribosomal protein L21 | chromosome | CDS | 1402915 | 312 | + | 0.346154 | |
CAC1258 | Hypothetical protein | chromosome | CDS | 1403229 | 375 | + | 0.312 | |
CAC1259 | Ribosomal protein L27 | chromosome | CDS | 1403607 | 303 | + | 0.369637 | |
CAC1261 | Predicted RNA-binding protein containing KH domain | chromosome | CDS | 1405336 | 291 | + | 0.340206 | |
CAC1265 | Translation initiation inhibitor, yabJ B.subtilis ortholog | chromosome | CDS | 1408074 | 384 | + | 0.356771 | |
CAC1266 | Pseudouridylate synthase family protein, yabo B.subtilis ortholog | chromosome | CDS | 1408461 | 900 | + | 0.323333 | |
CAC1274 | Ribosomal protein S20 | chromosome | CDS | 1417389 | 267 | - | 0.262172 | |
CAC1284 | SAM-dependent methyltransferase | chromosome | CDS | 1428812 | 936 | + | 0.318376 | |
CAC1286 | Fe-S oxidoreductases | chromosome | CDS | 1430516 | 1311 | + | 0.315789 | |
CAC1288 | Ribosomal protein S21 | chromosome | CDS | 1432367 | 177 | + | 0.310734 | |
CAC1297 | N-terminal fragment of elongation factor Ts | chromosome | CDS | 1439742 | 594 | + | 0.321549 | |
CAC1435 | S-adenosylmethionine-dependentmethyltransferases | chromosome | CDS | 1580242 | 1371 | + | 0.351568 | |
CAC1448 | tetracycline resistance protein, tetQ family, GTPase | chromosome | CDS | 1595610 | 1959 | + | 0.314957 | |
CAC1478 | Ribosomal protein S4 | chromosome | CDS | 1625722 | 579 | + | 0.345423 | |
CAC1490 | Hypothetical protein | chromosome | CDS | 1637095 | 174 | + | 0.287356 | |
CAC1557 | Predicted acetyltransferase | chromosome | CDS | 1701139 | 576 | + | 0.300347 | |
CAC1583 | Predicted P-loop ATPase | chromosome | CDS | 1726999 | 564 | - | 0.301418 | |
CAC1594 | Ribosomal protein S4 | chromosome | CDS | 1738518 | 591 | - | 0.307953 | |
CAC1603 | Diverged enzyme related to 2'-5' RNA ligase, ortholog YJCG B.subtilis | chromosome | CDS | 1747175 | 534 | + | 0.310861 | |
CAC1617 | Hypothetical protein | chromosome | CDS | 1758980 | 198 | + | 0.313131 | |
CAC1661 | Predicted secreted nucleic acid binding protein | chromosome | CDS | 1805144 | 342 | + | 0.289474 | |
CAC1678 | Alanyl-tRNA synthetase | chromosome | CDS | 1827028 | 2646 | + | 0.318594 | |
CAC1714 | L-asparaginase | chromosome | CDS | 1863685 | 996 | + | 0.349398 | |
CAC1722 | N-formylmethionyl-tRNA deformylase | chromosome | CDS | 1871549 | 453 | + | 0.324503 | |
CAC1723 | Methionyl-tRNA formyltransferase | chromosome | CDS | 1872002 | 933 | + | 0.324759 | |
CAC1725 | Predicted rRNA methylase, SUN family | chromosome | CDS | 1873652 | 1326 | + | 0.279035 | |
CAC1733 | Ribosomal protein L28 | chromosome | CDS | 1881302 | 192 | - | 0.354167 | |
CAC1745 | Ribosomal protein L32 | chromosome | CDS | 1893146 | 183 | + | 0.344262 | |
CAC1755 | Ribosomal protein S16 | chromosome | CDS | 1903523 | 246 | + | 0.345528 | |
CAC1757 | RimM protein, required for 16S rRNA processing | chromosome | CDS | 1904144 | 501 | + | 0.281437 | |
CAC1758 | TRNA-(guanine-N1)-methyltransferase, TrmD | chromosome | CDS | 1904629 | 729 | + | 0.336077 | |
CAC1759 | Ribosomal protein L19 | chromosome | CDS | 1905485 | 345 | + | 0.353623 | |
CAC1787 | Ribosomal protein S2 | chromosome | CDS | 1937317 | 702 | + | 0.317664 | |
CAC1788 | Translation elongation factor Ts | chromosome | CDS | 1938126 | 921 | + | 0.319218 | |
CAC1790 | Ribosome recycling factor | chromosome | CDS | 1939847 | 558 | + | 0.317204 | |
CAC1801 | Possibly nucleic acid binding protein similar to ribosomal protein HS6-type, YLXQ B.subtilis ortholog | chromosome | CDS | 1950007 | 309 | + | 0.265372 | |
CAC1802 | Translation IF2, GTPase | chromosome | CDS | 1950331 | 2082 | + | 0.333814 | |
CAC1803 | Ribosome-binding factor A | chromosome | CDS | 1952448 | 366 | + | 0.295082 | |
CAC1805 | Pseudouridine synthase | chromosome | CDS | 1953768 | 870 | + | 0.303448 | |
CAC1807 | Ribosomal Protein S15 | chromosome | CDS | 1955691 | 264 | + | 0.287879 | |
CAC1808 | Polyribonucleotide nucleotidyltransferase | chromosome | CDS | 1956210 | 2112 | + | 0.335227 | |
CAC1813 | Predicted Fe-S oxidoreductase | chromosome | CDS | 1963081 | 1338 | + | 0.289238 | |
CAC1835 | TRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 1985634 | 930 | - | 0.295699 | |
CAC1838 | Predicted Fe-S oxidoreductase, YMCB B.subtilis ortholog | chromosome | CDS | 1991114 | 1326 | - | 0.324284 | |
CAC1851 | Predicted pseudouridylate synthase | chromosome | CDS | 2003729 | 711 | - | 0.300985 | |
CAC1864 | Hypothetical protein | chromosome | CDS | 2014004 | 177 | - | 0.265537 | |
CAC1904 | Hypothetical protein | chromosome | CDS | 2046962 | 195 | - | 0.34359 | |
CAC1909 | Ribonuclease D | chromosome | CDS | 2048697 | 618 | - | 0.231392 | |
CAC1964 | Ribosomal protein S1 | chromosome | CDS | 2080494 | 831 | - | 0.315283 | |
CAC2058 | Predicted membrane protein | chromosome | CDS | 2162971 | 528 | + | 0.236742 | |
CAC2062 | TRNA nucleotidyltransferase family enzyme | chromosome | CDS | 2165379 | 1182 | - | 0.263113 | |
CAC2076 | Predicted rRNA methylase, YQXC B.subtilis ortholog | chromosome | CDS | 2178242 | 804 | - | 0.34204 | |
CAC2086 | Stage III sporulation protein AH, SpoIIIAH | chromosome | CDS | 2186577 | 534 | - | 0.32397 | |
CAC2094 | Translation elongation factor P | chromosome | CDS | 2191806 | 561 | - | 0.326203 | |
CAC2114 | Predicted pseudouridylate synthase, YLYB B.subtilis ortholog | chromosome | CDS | 2207561 | 918 | - | 0.326797 | |
CAC2134 | Predicted GTPase, YYAF B.subtilis ortholog | chromosome | CDS | 2225015 | 1098 | + | 0.344262 | |
CAC2233 | TRNA5-methylaminomethyl-2-thiouridylate)- methyltransferase, PP-loop ATPase | chromosome | CDS | 2326779 | 1068 | - | 0.328652 | |
CAC2269 | Aspartyl-tRNA synthetase | chromosome | CDS | 2371732 | 1788 | - | 0.345078 | |
CAC2273 | Uncharacterized protein YihZ family | chromosome | CDS | 2375696 | 450 | - | 0.317778 | |
CAC2282 | Queuine tRNA-ribosyltransferase, tgt | chromosome | CDS | 2385126 | 1131 | - | 0.348364 | |
CAC2283 | Queuine synthetase, queA | chromosome | CDS | 2386274 | 1026 | - | 0.339181 | |
CAC2286 | Uncharacterized protein, similar to protein from Clostridium histolyticum (GI:3892648) | chromosome | CDS | 2389059 | 648 | - | 0.280864 | |
CAC2357 | Phenylalanyl-tRNA synthetase (alpha subunit) | chromosome | CDS | 2468068 | 1020 | - | 0.346078 | |
CAC2358 | RRNA methylase, YSGA B.subtilis ortholog | chromosome | CDS | 2469428 | 786 | - | 0.301527 | |
CAC2359 | Ribosomal protein L20 | chromosome | CDS | 2470274 | 360 | - | 0.288889 | |
CAC2360 | Ribosomal protein L35 | chromosome | CDS | 2470663 | 198 | - | 0.30303 | |
CAC2361 | Translation initiation factor IF3 | chromosome | CDS | 2470881 | 528 | - | 0.304924 | |
CAC2362 | Threonyl-tRNA synthetase | chromosome | CDS | 2471596 | 1914 | - | 0.329676 | |
CAC2399 | Valyl-tRNA synthetase | chromosome | CDS | 2508166 | 2646 | - | 0.344293 | |
CAC2421 | Predicted enzyme with TIM-barrel fold | chromosome | CDS | 2537768 | 1107 | - | 0.303523 | |
CAC2474 | N-formylmethionyl-tRNA deformylase | chromosome | CDS | 2585433 | 453 | + | 0.326711 | |
CAC2480 | Predicted acetyltransferase | chromosome | CDS | 2589459 | 531 | - | 0.278719 | |
CAC2548 | Reductase/isomerase/elongation factor common domain | chromosome | CDS | 2656924 | 351 | - | 0.324786 | |
CAC2561 | Predicted acetyltransferase | chromosome | CDS | 2665988 | 501 | - | 0.293413 | |
CAC2669 | Glu-tRNAGln amidotransferase subunit B | chromosome | CDS | 2785748 | 1431 | - | 0.338225 | |
CAC2670 | Glu-tRNAGln amidotransferase subunit A | chromosome | CDS | 2787198 | 1458 | - | 0.34225 | |
CAC2671 | Glu-tRNAGln amidotransferase subunit C | chromosome | CDS | 2788677 | 300 | - | 0.293333 | |
CAC2676 | Predicted pseudouridylate synthase | chromosome | CDS | 2794724 | 729 | - | 0.322359 | |
CAC2693 | Predicted membrane protein | chromosome | CDS | 2816104 | 459 | - | 0.272331 | |
CAC2740 | Histidyl-tRNA synthetase | chromosome | CDS | 2867695 | 1293 | - | 0.300077 | |
CAC2748 | ATP dependent RNA helicase DeaD, superfamily II | chromosome | CDS | 2877184 | 1446 | - | 0.324343 | |
CAC2845 | Protein chain release factor B | chromosome | CDS | 2976659 | 990 | - | 0.343434 | |
CAC2847 | Ribosome-associated protein Y (PSrp-1) | chromosome | CDS | 2980619 | 525 | - | 0.310476 | |
CAC2857 | Spore protease GPR related protein, YYAC B.subtilis ortholog | chromosome | CDS | 2992090 | 567 | + | 0.320988 | |
CAC2882 | Predicted translation factor (SUA5) | chromosome | CDS | 3013809 | 1053 | - | 0.331434 | |
CAC2884 | Protein chain release factor A | chromosome | CDS | 3015472 | 1080 | - | 0.35463 | |
CAC2885 | S-adenosylmethionine-dependent methyltransferase, HEMK ortholog | chromosome | CDS | 3016633 | 858 | - | 0.327506 | |
CAC2888 | 50S ribosomal protein L31 | chromosome | CDS | 3019235 | 213 | + | 0.338028 | |
CAC2976 | Glu-tRNAGln amidotransferase subunit B | chromosome | CDS | 3111491 | 1437 | - | 0.341684 | |
CAC2977 | Glutamyl-tRNAGln amidotransferase subunit A | chromosome | CDS | 3112931 | 1437 | - | 0.351427 | |
CAC2978 | Glu-tRNA amidotransferase, subunit C | chromosome | CDS | 3114382 | 294 | - | 0.29932 | |
CAC2979 | Aspartyl-tRNA synthetase | chromosome | CDS | 3114718 | 1293 | - | 0.33024 | |
CAC2981 | Mannose-1-phosphate guanyltransferase (pyrophosphorylase domain and phosphomannomutase domain) | chromosome | CDS | 3116385 | 2448 | - | 0.305964 | |
CAC2983 | Hypothetical protein | chromosome | CDS | 3120028 | 855 | - | 0.291228 | |
CAC2986 | Dimethyladenosine transferase | chromosome | CDS | 3123195 | 831 | - | 0.299639 | |
CAC2991 | Methionyl-tRNA synthetase | chromosome | CDS | 3127610 | 1935 | - | 0.325065 | |
CAC3010 | ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog | chromosome | CDS | 3149865 | 1587 | - | 0.300567 | |
CAC3038 | Isoleucyl-tRNA synthetase | chromosome | CDS | 3184955 | 3108 | - | 0.340734 | |
CAC3056 | Nucleoside-diphosphate-sugar pyrophosphorylase | chromosome | CDS | 3205777 | 705 | - | 0.306383 | |
CAC3097 | Ribosomal protein S9 | chromosome | CDS | 3250188 | 393 | - | 0.346056 | |
CAC3098 | Ribosomal protein L13 | chromosome | CDS | 3250606 | 435 | - | 0.31954 | |
CAC3099 | Pseudouridylate synthase, TRUA | chromosome | CDS | 3251194 | 735 | - | 0.330612 | |
CAC3103 | Ribosomal protein L17 | chromosome | CDS | 3254512 | 345 | - | 0.35942 | |
CAC3105 | Ribosomal protein S4 | chromosome | CDS | 3255889 | 621 | - | 0.325282 | |
CAC3106 | Ribosomal protein S11 | chromosome | CDS | 3256537 | 396 | - | 0.361111 | |
CAC3107 | Ribosomal protein S13 | chromosome | CDS | 3256961 | 372 | - | 0.319892 | |
CAC3108 | Ribosomal protein L36 | chromosome | CDS | 3257447 | 114 | - | 0.324561 | |
CAC3109 | Translation initiation factor IF-1 | chromosome | CDS | 3257576 | 219 | - | 0.360731 | |
CAC3110 | Ribosomal protein L14E (archaeal/eukaryotic type) | chromosome | CDS | 3257802 | 279 | - | 0.322581 | |
CAC3114 | Ribosomal protein L15 | chromosome | CDS | 3260799 | 441 | - | 0.353741 | |
CAC3115 | Ribosomal protein L30 | chromosome | CDS | 3261263 | 174 | - | 0.275862 | |
CAC3116 | Ribosomal protein S5 | chromosome | CDS | 3261449 | 498 | - | 0.361446 | |
CAC3117 | Ribosomal protein L18 | chromosome | CDS | 3261971 | 354 | - | 0.353107 | |
CAC3118 | Ribosomal protein L6 | chromosome | CDS | 3262346 | 540 | - | 0.337037 | |
CAC3119 | Ribosomal protein S8 | chromosome | CDS | 3262912 | 399 | - | 0.338346 | |
CAC3120 | Ribosomal protein S14 | chromosome | CDS | 3263342 | 186 | - | 0.354839 | |
CAC3121 | Ribosomal protein L5 | chromosome | CDS | 3263543 | 543 | - | 0.309392 | |
CAC3122 | Ribosomal protein L24 | chromosome | CDS | 3264108 | 321 | - | 0.314642 | |
CAC3123 | Ribosomal protein L14 | chromosome | CDS | 3264445 | 369 | - | 0.363144 | |
CAC3124 | Ribosomal protein S17 | chromosome | CDS | 3264839 | 255 | - | 0.309804 | |
CAC3125 | Ribosomal protein L29 | chromosome | CDS | 3265116 | 204 | - | 0.303922 | |
CAC3126 | Ribosomal protein L16 | chromosome | CDS | 3265309 | 444 | - | 0.380631 | |
CAC3127 | Ribosomal protein S3 | chromosome | CDS | 3265770 | 669 | - | 0.337818 | |
CAC3128 | Ribosomal protein L22 | chromosome | CDS | 3266455 | 336 | - | 0.318452 | |
CAC3129 | Ribosomal protein S19 | chromosome | CDS | 3266813 | 282 | - | 0.333333 | |
CAC3130 | Ribosomal protein L2 | chromosome | CDS | 3267163 | 834 | - | 0.370504 | |
CAC3131 | Ribosomal protein L23 | chromosome | CDS | 3268050 | 297 | - | 0.313131 | |
CAC3132 | Ribosomal protein L4 | chromosome | CDS | 3268346 | 621 | - | 0.342995 | |
CAC3133 | Ribosomal protein L3 | chromosome | CDS | 3268991 | 630 | - | 0.346032 | |
CAC3134 | Ribosomal protein S10 | chromosome | CDS | 3269683 | 309 | - | 0.313916 | |
CAC3136 | Elongation Factor Tu (Ef-Tu) | chromosome | CDS | 3270300 | 1194 | - | 0.375209 | |
CAC3138 | Translation elongation factor EF-G | chromosome | CDS | 3271523 | 2064 | - | 0.354167 | |
CAC3139 | Ribosomal protein S7 | chromosome | CDS | 3273758 | 471 | - | 0.341826 | |
CAC3140 | Ribosomal protein S12 | chromosome | CDS | 3274414 | 378 | - | 0.378307 | |
CAC3141 | Ribosomal protein HS6-type | chromosome | CDS | 3274884 | 240 | - | 0.3125 | |
CAC3145 | Ribosomal protein L7/L12 | chromosome | CDS | 3282991 | 372 | - | 0.38172 | |
CAC3146 | Ribosomal protein L10 | chromosome | CDS | 3283414 | 507 | - | 0.325444 | |
CAC3147 | Ribosomal protein L1 | chromosome | CDS | 3284106 | 690 | - | 0.349275 | |
CAC3148 | Ribosomal protein L11 | chromosome | CDS | 3284848 | 426 | - | 0.370892 | |
CAC3151 | L33 | chromosome | CDS | 3286143 | 150 | - | 0.306667 | |
CAC3154 | RRNA methylase, YACO B.subtilis ortholog | chromosome | CDS | 3289380 | 759 | - | 0.329381 | |
CAC3177 | Cysteinyl-tRNA synthetase | chromosome | CDS | 3312836 | 1395 | - | 0.325448 | |
CAC3178 | Prolyl-tRNA synthetase | chromosome | CDS | 3314268 | 1713 | - | 0.349679 | |
CAC3195 | Glycyl-tRNA synthetase | chromosome | CDS | 3340027 | 1389 | - | 0.329014 | |
CAC3197 | Lysyl-tRNA synthetase | chromosome | CDS | 3341919 | 1548 | - | 0.324935 | |
CAC3199 | NifR3 family enzyme | chromosome | CDS | 3344107 | 966 | - | 0.332298 | |
CAC3206 | Ribosomal protein S1 domain family protein | chromosome | CDS | 3354877 | 408 | - | 0.303922 | |
CAC3210 | Predicted RNA-binding protein, YABO B.subtilis ortholog | chromosome | CDS | 3356447 | 255 | - | 0.317647 | |
CAC3217 | Stage V sporulation protein C, peptidyl-tRNA hydrolase | chromosome | CDS | 3365800 | 564 | - | 0.306738 | |
CAC3260 | Aspartyl/asparaginyl-tRNA synthetase | chromosome | CDS | 3410046 | 1392 | - | 0.329741 | |
CAC3384 | Protein chain release factor B | chromosome | CDS | 3561817 | 615 | + | 0.338211 | |
CAC3423 | Acetyltransferase (ribosomal protein N-acetylase subfamily) | chromosome | CDS | 3609481 | 519 | + | 0.327553 | |
CAC3454 | Predicted TIM-barrel enzyme, nifR3 family | chromosome | CDS | 3651191 | 936 | - | 0.297009 | |
CAC3532 | Hypothetical protein | chromosome | CDS | 3726788 | 321 | - | 0.314642 | |
CAC3541 | 2'-5' RNA ligase family protein, diverged | chromosome | CDS | 3736428 | 549 | + | 0.285975 | |
CAC3562 | HD superfamily hydrolase | chromosome | CDS | 3760611 | 630 | - | 0.339683 | |
CAC3564 | Aspartyl/asparaginyl-tRNA synthetase | chromosome | CDS | 3763054 | 1440 | - | 0.319444 | |
CAC3717 | Ribosomal protein L9 | chromosome | CDS | 3923350 | 444 | - | 0.292793 | |
CAC3722 | Ribosomal protein S18 | chromosome | CDS | 3928341 | 273 | - | 0.326007 | |
CAC3724 | Ribosomal protein S6 | chromosome | CDS | 3929096 | 288 | - | 0.288194 | |
CAC3738 | RnpA, ribonuclease P protein component | chromosome | CDS | 3940241 | 360 | - | 0.266667 | |
CAC3739 | L34 | chromosome | CDS | 3940647 | 135 | - | 0.288889 |