TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-06 01:55:47

Gene list

Applied filters:

COG category: Translation, ribosomal structure and biogenesis
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

Number of genes found: 173

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DVU0923 endoribonuclease, L-PSP familychromosome CDS1014066 399 - 0.483709
NA DVU3166 alanyl-tRNA synthetase family protein, putativechromosome CDS3322606 657 + 0.65449
NA DVU0620 endoribonuclease, L-PSP familychromosome CDS686025 384 + 0.643229
NA DVU0907 conserved domain proteinchromosome CDS998948 2940 - 0.685714
NA DVU1266 hypothetical proteinchromosome CDS1354391 3438 - 0.616638
NA DVU3053 conserved hypothetical proteinchromosome CDS3179101 894 - 0.665548
NA DVU1522 hypothetical proteinchromosome CDS1590750 396 + 0.613636
NA DVU2737 RNA methyltransferase, TrmH familychromosome CDS2838542 765 + 0.665359
NA DVU2002 hypothetical proteinchromosome CDS2084394 423 + 0.498818
NA DVU1255 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS1341261 633 + 0.665087
NA DVU0042 RNA methyltransferase, TrmH family, group 3chromosome CDS49565 750 + 0.682667
NA DVU2678 RNA pseudouridine synthase family proteinchromosome CDS2789463 1203 + 0.701579
NA DVU0965 hypothetical proteinchromosome CDS1062907 177 + 0.576271
NA DVU1511 hypothetical proteinchromosome CDS1583104 231 - 0.601732
NA DVU0066 cytidine/deoxycytidylate deaminase domain proteinchromosome CDS78122 570 + 0.638596
NA DVU1875 dafA proteinchromosome CDS1943493 318 - 0.575472
NA DVU0881 translation elongation factor G, putativechromosome CDS971471 2067 - 0.633769
NA DVU0357 conserved hypothetical proteinchromosome CDS406059 918 + 0.657952
NA DVU0614 hypothetical proteinchromosome CDS683049 282 - 0.578014
NA DVU3189 NOL1/NOP2/sun family proteinchromosome CDS3348264 1296 - 0.669753
NA DVU1469 ribosomal protein S1, putativechromosome CDS1549690 1464 - 0.666667
NA DVU0054 dihydrouridine synthase family proteinchromosome CDS60507 1260 + 0.674603
NA DVU2652 hypothetical proteinchromosome CDS2766824 582 - 0.553265
NA DVU3151 MiaB-like tRNA modifying enzyme YliG, TIGR01125chromosome CDS3303547 1293 - 0.66744
NA DVU1091 conserved hypothetical proteinchromosome CDS1195859 1107 + 0.661247
NA DVU3055 ribonuclease, Rne/Rng familychromosome CDS3181505 1470 + 0.62585
NA DVU0084 translation initiation factor, aIF-2BI family, putativechromosome CDS102596 1053 - 0.659069
NA DVU1836 tRNA nucleotidyltransferase, putativechromosome CDS1906976 1152 + 0.631944
NA DVU1528 cytidine/deoxycytidylate deaminase family proteinchromosome CDS1596516 486 - 0.658436
NA DVU2903 HD domain proteinchromosome CDS3002932 1329 + 0.637321
NA DVU2647 endoribonuclease, L-PSP familychromosome CDS2764110 390 - 0.594872
NA DVU2911 hemolysin Achromosome CDS3012054 762 - 0.661417
NA DVU2203 endoribonuclease, L-PSP familychromosome CDS2299312 375 + 0.624
NA DVU0661 dihydrouridine synthase family proteinchromosome CDS732072 999 + 0.692693
NA DVU2339 ribosomal protein L11 methyltransferase, putativechromosome CDS2435422 852 - 0.663146
NA DVU1530 metallo-beta-lactamase family proteinchromosome CDS1598015 1611 + 0.599628
NA DVU2999 methionyl-tRNA formyltransferase, putativechromosome CDS3109908 828 - 0.689614
NA DVU2198 hypothetical proteinchromosome CDS2294218 198 - 0.585859
NA DVU1073 conserved domain proteinchromosome CDS1177463 927 + 0.655879
NA DVU2486 acetyltransferase, GNAT familychromosome CDS2597619 546 - 0.648352
NA DVU3088 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS3229894 1734 + 0.6609
NA DVU1525 conserved domain proteinchromosome CDS1593138 993 + 0.611279
NA DVU0880 hypothetical proteinchromosome CDS970692 390 - 0.561538
NA DVU0304 hypothetical proteinchromosome CDS350004 282 - 0.599291
NA DVU3310 ATP-dependent RNA helicase, DEAD/DEAH familychromosome CDS3486594 1599 + 0.676048
NA DVU2238 RNA methyltransferase, TrmH familychromosome CDS2330215 480 - 0.654167
NA DVU1133 hypothetical proteinchromosome CDS1232504 459 - 0.647059
NA DVU0897 RNA modification enzyme, MiaB-familychromosome CDS989827 1377 + 0.675381
NA DVU2612 conserved hypothetical proteinchromosome CDS2731396 390 + 0.625641
NA DVU2642 alanyl-tRNA synthetase family protein, putativechromosome CDS2757848 444 + 0.632883
NA DVU0072 glucose-1-phosphate cytidylyl-transferasechromosome CDS89105 780 + 0.619231
NA DVU1429 GTP-binding proteinchromosome CDS1503735 1101 - 0.625795
NA DVU2697 hypothetical proteinchromosome CDS2807721 339 + 0.469027
alaS DVU1089 alanyl-tRNA synthetasechromosome CDS1191779 2640 - 0.642045
argS DVU1248 arginyl-tRNA synthetasechromosome CDS1333990 1656 - 0.641304
asnS DVU0007 asparaginyl-tRNA synthetasechromosome CDS9552 1386 - 0.622655
aspS DVU3367 aspartyl-tRNA synthetasechromosome CDS3537577 1833 - 0.644299
cysS DVU1579 cysteinyl-tRNA synthetasechromosome CDS1661372 1458 - 0.60631
def DVU3366 polypeptide deformylasechromosome CDS3536759 516 - 0.608527
dtd DVU1452 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS1530262 489 - 0.652352
efp DVU1666 translation elongation factor Pchromosome CDS1745214 558 + 0.596774
fmt DVU3365 methionyl-tRNA formyltransferasechromosome CDS3535794 993 - 0.672709
frr DVU0870 ribosome recycling factorchromosome CDS962781 561 - 0.609626
fusA-1 DVU1300 translation elongation factor Gchromosome CDS1390506 2076 + 0.590559
fusA-2 DVU1799 translation elongation factor Gchromosome CDS1859827 2049 - 0.646657
gatA DVU0808 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS893450 1470 - 0.670748
gatB DVU1885 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS1956477 1431 - 0.62334
gatC DVU0809 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS894941 285 - 0.610526
gid DVU2350 gid proteinchromosome CDS2445526 1425 + 0.663158
glnS DVU2951 glutaminyl-tRNA synthetasechromosome CDS3056772 1713 + 0.625803
gltX-1 DVU1693 glutamyl-tRNA synthetasechromosome CDS1769611 975 - 0.627692
gltX-2 DVU2552 glutamyl-tRNA synthetasechromosome CDS2663659 1392 - 0.648707
glyQ DVU1898 glycyl-tRNA synthetase, alpha subunitchromosome CDS1972583 870 - 0.601149
glyS DVU1897 glycyl-tRNA synthetase, beta subunitchromosome CDS1970475 2091 - 0.644668
hemK DVU2916 hemK proteinchromosome CDS3016134 888 + 0.627252
hisS DVU3368 histidyl-tRNA synthetasechromosome CDS3539428 1254 - 0.645136
ileS DVU1927 isoleucyl-tRNA synthetasechromosome CDS1999840 2817 + 0.636493
infA-1 DVU0014 translation initiation factor IF-1chromosome CDS18470 219 - 0.56621
infA-2 DVU2216 translation initiation factor IF-1chromosome CDS2311725 264 + 0.617424
infB DVU0508 translation initiation factor IF-2chromosome CDS580044 3240 - 0.675926
infC DVU2537 translation initiation factor IF-3chromosome CDS2648707 531 - 0.610169
ksgA DVU1797 dimethyladenosine transferasechromosome CDS1858413 801 - 0.634207
leuS DVU1196 leucyl-tRNA synthetasechromosome CDS1287085 2490 - 0.628916
lysS DVU2376 lysyl-tRNA synthetasechromosome CDS2473176 1506 - 0.614874
map DVU1324 methionine aminopeptidase, type Ichromosome CDS1403373 780 + 0.564103
miaA DVU1533 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1600856 930 + 0.652688
miaB DVU0984 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS1080262 1350 - 0.642963
pheS DVU2534 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS2646695 1038 - 0.628131
pnp DVU0503 polyribonucleotide nucleotidyltransferasechromosome CDS574964 2283 - 0.65922
prfA DVU2914 peptide chain release factor 1chromosome CDS3014361 1074 + 0.63594
prfB DVU1861 peptide chain release factor 2, programmed frameshiftchromosome CDS1928351 1117 + 0.59803
prfC DVU3116 peptide chain release factor 3chromosome CDS3264560 1590 + 0.637736
proS DVU1345 prolyl-tRNA synthetasechromosome CDS1422321 1725 + 0.647536
pth DVU1573 peptidyl-tRNA hydrolasechromosome CDS1655955 606 - 0.59901
queA DVU3351 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS3522270 1116 - 0.672043
rhlE DVU1982 ATP-dependent RNA helicase RhlEchromosome CDS2058879 1389 - 0.680346
rimM DVU0837 16S rRNA processing protein RimMchromosome CDS926250 531 - 0.591337
rluB DVU1669 ribosomal large subunit pseudouridine synthase Bchromosome CDS1749106 804 - 0.629353
rluC DVU3191 ribosomal large subunit pseudouridine synthase Cchromosome CDS3351436 1173 + 0.6948
rluD/coaE DVU1024 ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinasechromosome CDS1127477 1626 - 0.669742
rnpA DVU1075 ribonuclease P protein componentchromosome CDS1178814 291 + 0.656357
rplA DVU2925 ribosomal protein L1chromosome CDS3022379 708 + 0.612994
rplB DVU1306 ribosomal protein L2chromosome CDS1395137 831 + 0.623345
rplC DVU1303 ribosomal protein L3chromosome CDS1393561 630 + 0.595238
rplD DVU1304 ribosomal protein L4chromosome CDS1394209 621 + 0.615137
rplE DVU1315 ribosomal protein L5chromosome CDS1398856 540 + 0.546296
rplF DVU1318 ribosomal protein L6chromosome CDS1400005 540 + 0.585185
rplI DVU0958 ribosomal protein L9chromosome CDS1052062 504 + 0.607143
rplJ DVU2926 ribosomal protein L10chromosome CDS3023255 522 + 0.597701
rplK DVU2924 ribosomal protein L11chromosome CDS3021847 423 + 0.588652
rplL DVU2927 ribosomal protein L7/L12chromosome CDS3023830 384 + 0.578125
rplM DVU2518 ribosomal protein L13chromosome CDS2632092 435 + 0.57931
rplN DVU1313 ribosomal protein L14chromosome CDS1398143 369 + 0.601626
rplO DVU1322 ribosomal protein L15chromosome CDS1401608 447 + 0.604027
rplP DVU1310 ribosomal protein L16chromosome CDS1397255 414 + 0.601449
rplQ DVU1330 ribosomal protein L17chromosome CDS1406972 402 + 0.641791
rplR DVU1319 ribosomal protein L18chromosome CDS1400558 360 + 0.6
rplS DVU0835 ribosomal protein L19chromosome CDS924557 348 - 0.623563
rplT DVU2535 ribosomal protein L20chromosome CDS2647904 354 - 0.621469
rplU DVU0927 ribosomal protein L21chromosome CDS1017855 309 + 0.579288
rplV DVU1308 ribosomal protein L22chromosome CDS1396271 339 + 0.60472
rplW DVU1305 ribosomal protein L23chromosome CDS1394795 339 + 0.566372
rplX DVU1314 ribosomal protein L24chromosome CDS1398521 324 + 0.549383
rplY DVU1574 ribosomal protein L25chromosome CDS1656675 573 - 0.568935
rpmA DVU0928 ribosomal protein L27chromosome CDS1018184 264 + 0.628788
rpmB DVU1211 ribosomal protein L28chromosome CDS1301234 210 + 0.590476
rpmC DVU1311 ribosomal protein L29chromosome CDS1397670 186 + 0.55914
rpmD DVU1321 ribosomal protein L30chromosome CDS1401438 171 + 0.567251
rpmE DVU2912 ribosomal protein L31chromosome CDS3013017 216 + 0.564815
rpmF DVU1209 ribosomal protein L32chromosome CDS1300271 180 - 0.666667
rpmG DVU2921 ribosomal protein L33chromosome CDS3020701 150 + 0.526667
rpmH DVU1074 ribosomal protein L34chromosome CDS1178593 135 + 0.607407
rpmI DVU2536 ribosomal protein L35chromosome CDS2648340 198 - 0.611111
rpmJ DVU1325 ribosomal protein L36chromosome CDS1404246 114 + 0.587719
rpsA DVU3150 ribosomal protein S1chromosome CDS3301599 1734 - 0.595732
rpsB DVU0874 ribosomal protein S2chromosome CDS966030 765 - 0.615686
rpsC DVU1309 ribosomal protein S3chromosome CDS1396614 639 + 0.588419
rpsD DVU1328 ribosomal protein S4chromosome CDS1405300 627 + 0.585327
rpsE DVU1320 ribosomal protein S5chromosome CDS1400937 492 + 0.626016
rpsF DVU0956 ribosomal protein S6chromosome CDS1051480 306 + 0.630719
rpsG DVU1299 ribosomal protein S7chromosome CDS1390020 471 + 0.583864
rpsH DVU1317 ribosomal protein S8chromosome CDS1399612 381 + 0.582677
rpsI DVU2519 ribosomal protein S9chromosome CDS2632545 393 + 0.631043
rpsJ DVU1302 ribosomal protein S10chromosome CDS1393231 318 + 0.578616
rpsK DVU1327 ribosomal protein S11chromosome CDS1404895 390 + 0.617949
rpsL DVU1298 ribosomal protein S12chromosome CDS1389633 372 + 0.61828
rpsM DVU1326 ribosomal protein S13chromosome CDS1404378 369 + 0.590786
rpsN DVU1316 ribosomal protein S14chromosome CDS1399408 186 + 0.629032
rpsO DVU0504 ribosomal protein S15chromosome CDS577418 270 - 0.581481
rpsP DVU0839 ribosomal protein S16chromosome CDS927121 240 - 0.595833
rpsQ DVU1312 ribosomal protein S17chromosome CDS1397866 267 + 0.546816
rpsR DVU0957 ribosomal protein S18chromosome CDS1051786 264 + 0.590909
rpsS DVU1307 ribosomal protein S19chromosome CDS1395977 282 + 0.553191
rpsT DVU1896 ribosomal protein S20chromosome CDS1970096 264 - 0.628788
rpsU DVU1792 ribosomal protein S21chromosome CDS1857405 213 - 0.535211
rrmJ DVU2260 ribosomal RNA large subunit methyltransferase Jchromosome CDS2353584 615 - 0.59187
rumA DVU0924 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS1014520 1407 - 0.632552
selB DVU0500 selenocysteine-specific translation elongation factorchromosome CDS571241 1929 + 0.659927
serS DVU0237 seryl-tRNA synthetasechromosome CDS270666 1275 - 0.619608
sun DVU3363 sun proteinchromosome CDS3532995 1524 - 0.629921
tgt DVU0726 queuine tRNA-ribosyltransferasechromosome CDS810938 1128 - 0.639184
thrS DVU2538 threonyl-tRNA synthetasechromosome CDS2649245 1935 - 0.618605
trmD DVU0836 tRNA (guanine-N1)-methyltransferasechromosome CDS924958 1278 - 0.607199
trmH DVU2355 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS2452485 591 - 0.624366
trmU DVU0807 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS892395 1041 - 0.654179
trpS DVU0142 tryptophanyl-tRNA synthetasechromosome CDS177038 990 + 0.623232
truA DVU0911 tRNA pseudouridine synthase Achromosome CDS1005807 894 - 0.655481
truB DVU0505 tRNA pseudouridine synthase Bchromosome CDS577712 915 - 0.625137
tsf DVU0873 translation elongation factor Tschromosome CDS965140 864 - 0.625
tuf DVU2920 translation elongation factor Tuchromosome CDS3019503 1194 + 0.602178
tyrS DVU0953 tyrosyl-tRNA synthetasechromosome CDS1046362 1197 + 0.614035
valS DVU0732 valyl-tRNA synthetasechromosome CDS816473 2655 + 0.639925
yfiA DVU1629 ribosomal subunit interface proteinchromosome CDS1713942 540 + 0.574074