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2024-05-09 06:08:52

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Chlamydophila pneumoniae CWL029, CWL029

Number of genes found: 120

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Chlamydophila pneumoniae CWL029, CWL029
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
CPn0045 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS61069 1725 + 0.433043
CPn0125 hypothetical proteinSubName: Full=HB7 protein; SubName: Full=Uncharacterized protein; chromosome CDS158096 513 + 0.393762
CPn0251 conserved hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS286060 1503 + 0.377246
CPn0379 CT053 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS426322 447 + 0.436242
CPn0713 CT663 hypothetical proteinRecName: Full=Protein CPn_0713/CP_0033/CPj0713/CpB0740; chromosome CDS799329 393 - 0.396947
alaS Alanyl tRNA SynthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS1021043 2619 - 0.424208
argS Arginyl tRNA TransferaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS659107 1686 + 0.412218
aspS Aspartyl tRNA SynthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome CDS741169 1755 - 0.408547
cafE Axial Filament ProteinSubName: Full=Axial Filament Protein; SubName: Full=Cytosolic axial filament protein cafA and ribonuclease E; SubName: Full=Ribonuclease G; chromosome CDS1094796 1548 - 0.383075
ctc General Stress ProteinRecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS1085929 558 + 0.385305
cysS Cysteinyl tRNA SynthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS1065718 1425 - 0.422456
def Polypeptide DeformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS1221735 561 + 0.40107
efp_1 Elongation Factor PRecName: Full=Elongation factor P 1; Short=EF-P 1; chromosome CDS221218 558 - 0.37276
efp_2 Elongation Factor PRecName: Full=Elongation factor P 2; Short=EF-P 2; chromosome CDS1026988 573 + 0.425829
fmt Methionyl tRNA FormyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS731707 966 - 0.447205
fmu RNA MethyltransferaseSubName: Full=Fmu methyltransferase; SubName: Full=Nol1/Nop2/Sun family protein; SubName: Full=RNA Methyltransferase; SubName: Full=RNA methyltransferase; chromosome CDS755574 1095 - 0.410959
fusA Elongation Factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS633577 2085 - 0.417746
gatA Glu tRNA Gln Amidotransferae (A subunit)RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS895 1479 + 0.440838
gatB (Pet112) Glu tRNA Gln Amidotransferase (B Subunit)RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS2370 1467 + 0.43013
gatC Glu-tRNA Gln Amidotransferase (C subunit)RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit C; Short=Glu-ADT subunit C; EC=6.3.5.-; chromosome CDS573 306 + 0.385621
gltX Glutamyl-tRNA SynthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS644095 1518 - 0.454545
glyQ Glycyl tRNA SynthetaseRecName: Full=Glycine--tRNA ligase; AltName: Full=Glycyl-tRNA synthetase; Short=GlyRS; EC=6.1.1.14; Includes: RecName: Full=Glycine--tRNA ligase alpha subunit; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Includes: RecName: Full=Glycine--tRNA ligase beta subunit; AltName: Full=Glycyl-tRNA synthetase beta subunit; chromosome CDS1079742 3045 - 0.411494
hemK A/G specific methylaseSubName: Full=A/G specific methylase; SubName: Full=Modification methylase, HemK family; chromosome CDS146398 867 + 0.415225
hisS Histidyl tRNA SynthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS742898 1293 - 0.410673
ileS Isoleucyl-tRNA SynthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS138655 3132 + 0.393359
infA Initiation Factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS89356 222 + 0.427928
infB Initiation Factor-2RecName: Full=Translation initiation factor IF-2; chromosome CDS360081 2673 + 0.408904
infC Initiation Factor 3RecName: Full=Translation initiation factor IF-3; chromosome CDS1139883 561 + 0.379679
kgsA Dimethyladenosine TransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS1214848 834 + 0.417266
leuS Leucyl tRNA SynthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS195433 2463 + 0.426309
lysS Lysyl tRNA SynthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS1064138 1584 + 0.410354
map Methionine AminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS1158183 876 - 0.432648
metG Methionyl-tRNA SynthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS152071 1656 + 0.399758
miaA tRNA Pyrophosphate TransferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS1041979 1029 + 0.387755
pcnB_1 Poly A PolymeraseSubName: Full=Poly A Polymerase; SubName: Full=Poly A polymerase; SubName: Full=Poly(A) polymerase; SubName: Full=Poly(A) polymerase family protein; chromosome CDS956847 1233 - 0.420114
pcnB_2 Poly A PolymeraseSubName: Full=Poly A Polymerase; chromosome CDS1106745 1293 - 0.37587
pfrA Peptide Chain Releasing FactorRecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS145335 1074 + 0.40689
pheS Phenylalanyl tRNA Synthetase, AlphaRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1141014 1020 + 0.397059
pnp Polyribonucleotide NucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS1150763 2085 - 0.404796
proS Prolyl tRNA SynthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS580659 1707 + 0.454013
pth Peptidyl tRNA HydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1086488 543 + 0.418048
rbfA Ribosome Binding Factor ARecName: Full=Ribosome-binding factor A; chromosome CDS362767 363 + 0.349862
rl1 L1 Ribosomal ProteinRecName: Full=50S ribosomal protein L1; chromosome CDS92465 699 + 0.386266
rl10 L10 Ribosomal ProteinRecName: Full=50S ribosomal protein L10; chromosome CDS93179 513 + 0.403509
rl11 L11 Ribosomal ProteinRecName: Full=50S ribosomal protein L11; chromosome CDS92013 426 + 0.382629
rl13 L13 Ribosomal ProteinRecName: Full=50S ribosomal protein L13; chromosome CDS282966 450 - 0.371111
rl14 L14 Ribosomal ProteinRecName: Full=50S ribosomal protein L14; chromosome CDS725096 369 - 0.368564
rl15 L15 Ribosomal ProteinRecName: Full=50S ribosomal protein L15; chromosome CDS721882 435 - 0.390805
rl16 L16 Ribosomal ProteinRecName: Full=50S ribosomal protein L16; chromosome CDS725961 417 - 0.414868
rl17 L17 Ribosomal ProteinRecName: Full=50S ribosomal protein L17; chromosome CDS718057 429 - 0.358974
rl18 L18 Ribosomal ProteinRecName: Full=50S ribosomal protein L18; chromosome CDS722824 372 - 0.370968
rl19 L19 Ribosomal ProteinRecName: Full=50S ribosomal protein L19; chromosome CDS150102 366 + 0.415301
rl2 L2 Ribosomal ProteinRecName: Full=50S ribosomal protein L2; chromosome CDS727719 855 - 0.423392
rl20 L20 Ribosomal ProteinRecName: Full=50S ribosomal protein L20; chromosome CDS1140634 366 + 0.418033
rl21 L21 Ribosomal ProteinRecName: Full=50S ribosomal protein L21; chromosome CDS630909 321 - 0.404984
rl22 L22 Ribosomal ProteinRecName: Full=50S ribosomal protein L22; chromosome CDS727093 336 - 0.41369
rl23 L23 Ribosomal ProteinRecName: Full=50S ribosomal protein L23; chromosome CDS728595 336 - 0.383929
rl24 L24 Ribosomal ProteinRecName: Full=50S ribosomal protein L24; chromosome CDS724747 336 - 0.395833
rl27 L27 ribosomal proteinRecName: Full=50S ribosomal protein L27; chromosome CDS630630 255 - 0.45098
rl28 L28 Ribosomal ProteinRecName: Full=50S ribosomal protein L28; chromosome CDS372945 270 + 0.37037
rl29 L29 Ribosomal ProteinRecName: Full=50S ribosomal protein L29; chromosome CDS725740 219 - 0.356164
rl3 L3 Ribosomal ProteinRecName: Full=50S ribosomal protein L3; chromosome CDS729654 678 - 0.408555
rl31 L31 Ribosomal ProteinRecName: Full=50S ribosomal protein L31 type B; chromosome CDS144767 330 + 0.351515
rl32 L32 Ribosomal ProteinRecName: Full=50S ribosomal protein L32; chromosome CDS1097118 183 + 0.409836
rl33 L33 Ribosomal ProteinRecName: Full=50S ribosomal protein L33; chromosome CDS285899 159 - 0.339623
rl34 L34 Ribosomal ProteinRecName: Full=50S ribosomal protein L34; chromosome CDS1068954 138 - 0.463768
rl35 L35 Ribosomal ProteinRecName: Full=50S ribosomal protein L35; chromosome CDS1140421 195 + 0.384615
rl36 L36 Ribosomal ProteinRecName: Full=50S ribosomal protein L36; chromosome CDS1069336 138 + 0.398551
rl4 L4 Ribosomal ProteinRecName: Full=50S ribosomal protein L4; chromosome CDS728947 675 - 0.368889
rl5 L5 Ribosomal ProteinRecName: Full=50S ribosomal protein L5; chromosome CDS724203 543 - 0.377532
rl6 L6 Ribosomal ProteinRecName: Full=50S ribosomal protein L6; chromosome CDS723206 552 - 0.396739
rl7 L7/L12 Ribosomal ProteinRecName: Full=50S ribosomal protein L7/L12; chromosome CDS93735 390 + 0.387179
rl9 L9 Ribosomal ProteinRecName: Full=50S ribosomal protein L9; chromosome CDS1087742 510 + 0.388235
rnpA Ribonuclease P Protein ComponentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS1068523 420 - 0.442857
rrf Ribosome Releasing FactorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS784182 543 + 0.388582
rs1 S1 Ribosomal ProteinRecName: Full=30S ribosomal protein S1; chromosome CDS356977 1743 + 0.369478
rs10 S10 Ribosomal ProteinRecName: Full=30S ribosomal protein S10; chromosome CDS633252 318 - 0.393082
rs11 S11 Ribosomal ProteinRecName: Full=30S ribosomal protein S11; chromosome CDS719637 402 - 0.415423
rs12 S12 Ribosomal ProteinRecName: Full=30S ribosomal protein S12; chromosome CDS636216 372 - 0.443548
rs13 S13 Ribosomal ProteinRecName: Full=30S ribosomal protein S13; chromosome CDS720060 369 - 0.373984
rs14 S14 Ribosomal ProteinRecName: Full=30S ribosomal protein S14; chromosome CDS1069496 306 + 0.395425
rs15 S15 Ribosomal ProteinRecName: Full=30S ribosomal protein S15; chromosome CDS1152888 270 - 0.359259
rs16 S16 Ribosomal ProteinRecName: Full=30S ribosomal protein S16; chromosome CDS148616 360 + 0.411111
rs17 S17 Ribosomal ProteinRecName: Full=30S ribosomal protein S17; chromosome CDS725487 261 - 0.371648
rs18 S18 Ribosomal ProteinRecName: Full=30S ribosomal protein S18; chromosome CDS1087478 249 + 0.361446
rs19 S19 Ribosomal ProteinRecName: Full=30S ribosomal protein S19; chromosome CDS727447 267 - 0.385768
rs2 S2 Ribosomal ProteinRecName: Full=30S ribosomal protein S2; chromosome CDS781769 834 + 0.381295
rs20 S20 Ribosomal ProteinRecName: Full=30S ribosomal protein S20; chromosome CDS851037 300 - 0.363333
rs21 S21 Ribosomal ProteinRecName: Full=30S ribosomal protein S21; chromosome CDS44711 177 + 0.40678
rs3 S3 Ribosomal ProteinRecName: Full=30S ribosomal protein S3; chromosome CDS726406 672 - 0.419643
rs4 S4 Ribosomal ProteinRecName: Full=30S ribosomal protein S4; chromosome CDS823098 630 - 0.406349
rs5 S5 Ribosomal ProteinRecName: Full=30S ribosomal protein S5; chromosome CDS722309 498 - 0.391566
rs6 S6 Ribosomal ProteinRecName: Full=30S ribosomal protein S6; chromosome CDS1087122 339 + 0.374631
rs7 S7 Ribosomal ProteinRecName: Full=30S ribosomal protein S7; chromosome CDS635695 474 - 0.421941
rs8 S8 Ribosomal ProteinRecName: Full=30S ribosomal protein S8; chromosome CDS723784 402 - 0.415423
rs9 S9 Ribosomal ProteinRecName: Full=30S ribosomal protein S9; chromosome CDS282548 405 - 0.37037
serS Seryl tRNA Synthetase-2RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS987445 1284 - 0.423676
sfhB predicted Pseudouridine SynthaseSubName: Full=Predicted Pseudouridine Synthase; SubName: Full=Pseudouridine synthase; SubName: Full=Ribosomal large subunit pseudouridine synthase A; SubName: Full=Ribosomal large subunit pseudouridine synthase D; chromosome CDS805916 978 + 0.41411
spoU_1 rRNA MethylaseSubName: Full=SpoU rRNA methylase family protein; SubName: Full=rRNA Methylase; SubName: Full=rRNA methylase; SubName: Full=tRNA methylase; chromosome CDS612457 798 - 0.385965
spoU_2 rRNA MethylaseRecName: Full=Putative tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase; chromosome CDS739857 471 - 0.401274
tgt Queuine tRNA Ribosyl TransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS259357 1119 + 0.441466
thrS Threonyl tRNA SynthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS911864 1908 - 0.42086
trmD tRNA (guanine N-1)-MethyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS148989 1086 + 0.412523
trpS Tryptophanyl tRNA SynthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS908706 1035 - 0.429952
truA Pseudouridylate Synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS669993 804 + 0.442786
truB tRNA Pseudouridine SynthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS363175 708 + 0.412429
tsf Elongation Factor TSRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS782602 849 + 0.398115
tufA Elongation Factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS89774 1185 + 0.431224
tyrS tyrosyl tRNA SynthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS405379 1269 - 0.415288
valS Valyl tRNA SynthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS113152 2823 + 0.424725
ycbF PP-loop superfamily ATPaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS484331 1086 - 0.436464
yceC predicted pseudouridine synthetase familyRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS449015 699 + 0.436338
ychF GTP Binding ProteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS364764 1095 - 0.4
yfhC cytosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS1153405 468 + 0.431624
ygcA rRNA MethyltransferseRecName: Full=Uncharacterized RNA methyltransferase CPn_0885/CP_0981/CPj0885/CpB0914; EC=2.1.1.-; chromosome CDS1009430 1206 - 0.40796
yjbC predicted pseudouridine synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS981670 708 + 0.425141
yohI predicted oxidoreductaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS864159 1008 + 0.434524
yqeV Hypothetical ProteinRecName: Full=Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB; EC=2.-.-.-; AltName: Full=tRNA-t(6)A37 methylthiotransferase; chromosome CDS554841 1266 - 0.43049
yvyD conserved hypothetical proteinSubName: Full=Ribosomal protein S30AE; SubName: Full=Uncharacterized protein; chromosome CDS677441 687 + 0.43377
ywlC SuA5 Superfamily-related ProteinSubName: Full=SuA5 Superfamily-related Protein; SubName: Full=SuA5 superfamily-related protein; SubName: Full=Sua5/YciO/YrdC family protein; chromosome CDS302465 861 - 0.375145