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2024-05-02 05:22:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Treponema denticola ATCC 35405, ATCC 35405

Number of genes found: 164

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema denticola ATCC 35405, ATCC 35405
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TDE0263 spermidine N1-acetyltransferase, putativechromosome CDS296490 543 - 0.322284
NA TDE1185 lipoprotein, putativechromosome CDS1211687 1377 - 0.42992
NA TDE1443 RNA methyltransferase, TrmH family, group 3chromosome CDS1488899 777 - 0.402831
NA TDE1012 tex protein, putativechromosome CDS1041533 2454 + 0.434393
NA TDE1648 conserved hypothetical proteinchromosome CDS1696576 255 - 0.298039
NA TDE2282 tRNA synthetase, class II family proteinchromosome CDS2318718 1038 - 0.398844
NA TDE1750 conserved hypothetical proteinchromosome CDS1803529 387 - 0.439276
NA TDE0887 PIN domain proteinchromosome CDS904423 420 - 0.285714
NA TDE1340 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5chromosome CDS1376457 636 + 0.397799
NA TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS2133665 1713 - 0.446001
NA TDE1296 ribosomal subunit interface protein, putativechromosome CDS1333554 291 - 0.360825
NA TDE0195 acetyltransferase, GNAT familychromosome CDS232032 570 - 0.321053
NA TDE2161 acetyltransferase, GNAT familychromosome CDS2194230 555 + 0.376577
NA TDE2084 RNA methyltransferase, TrmH familychromosome CDS2113534 756 + 0.388889
NA TDE1726 polyA polymerase family proteinchromosome CDS1779686 1143 + 0.380577
NA TDE2592 DbpA RNA binding domain proteinchromosome CDS2627166 627 + 0.374801
NA TDE1577 lipoprotein, putativechromosome CDS1624649 858 + 0.335664
NA TDE1083 RNA pseudouridylate synthasechromosome CDS1114306 786 + 0.384224
NA TDE2576 RNA pseudouridylate synthase family proteinchromosome CDS2601812 735 + 0.416327
NA TDE2289 phosphoribulokinase/uridine kinase family proteinchromosome CDS2325904 1653 + 0.413793
NA TDE1987 conserved hypothetical proteinchromosome CDS2002452 411 + 0.43309
NA TDE1886 MiaB-like tRNA modifying enzymechromosome CDS1907172 1407 - 0.390192
NA TDE0081 hypothetical proteinchromosome CDS92643 1389 - 0.362131
NA TDE1186 hypothetical proteinchromosome CDS1213075 501 - 0.319361
NA TDE2080 cytidylate kinase/ribosomal protein S1chromosome CDS2109139 2436 - 0.41092
NA TDE0846 conserved hypothetical proteinchromosome CDS868763 2163 + 0.376792
NA TDE0947 translation elongation factor G, putativechromosome CDS968804 2079 - 0.452621
NA TDE1155 hypothetical proteinchromosome CDS1191246 300 - 0.333333
NA TDE1033 polyA polymerase family proteinchromosome CDS1061209 1347 + 0.448404
NA TDE2162 NOL1/NOP2/sun family proteinchromosome CDS2194829 792 + 0.434343
NA TDE1444 metallo-beta-lactamase family proteinchromosome CDS1489682 1413 - 0.408351
NA TDE2488 modification methylase, HemK familychromosome CDS2510485 990 - 0.418182
NA TDE2637 conserved hypothetical proteinchromosome CDS2676882 525 - 0.430476
NA TDE1392 hypothetical proteinchromosome CDS1432142 492 + 0.343496
NA TDE2609 MiaB-like tRNA modifying enzyme YliG, TIGR01125chromosome CDS2650561 1404 + 0.401709
NA TDE1978 conserved hypothetical proteinchromosome CDS1991591 258 - 0.391473
NA TDE1481 conserved hypothetical proteinchromosome CDS1525797 1137 + 0.362357
NA TDE1387 RNA pseudouridylate synthase family proteinchromosome CDS1426905 918 - 0.363834
NA TDE0556 hypothetical proteinchromosome CDS591628 555 - 0.4
NA TDE1116 conserved hypothetical proteinchromosome CDS1149446 309 - 0.291262
NA TDE0735 conserved hypothetical proteinchromosome CDS774836 258 - 0.445736
NA TDE2069 endoribonuclease L-PSP, putativechromosome CDS2096772 378 + 0.452381
NA TDE0236 PIN domain proteinchromosome CDS269297 411 + 0.301703
NA TDE1588 tryptophanyl-tRNA synthetase, putativechromosome CDS1635953 1074 + 0.443203
NA TDE1082 ribosomal large subunit pseudouridine synthase, RluD subfamilychromosome CDS1113275 1038 + 0.388247
NA TDE0050 RNA methyltransferase, TrmH familychromosome CDS59373 789 - 0.413181
NA TDE0569 hypothetical proteinchromosome CDS599776 447 + 0.458613
NA TDE2503 conserved domain proteinchromosome CDS2527967 1173 + 0.388747
NA TDE2164 hypothetical proteinchromosome CDS2196338 708 - 0.38983
NA TDE2195 RNA pseudouridylate synthase family proteinchromosome CDS2231261 711 + 0.389592
NA TDE2619 RNA methyltransferase, TrmA family, putativechromosome CDS2660420 1215 + 0.38107
NA TDE1667 eIF-2B alpha/beta/delta-related uncharacterized proteinchromosome CDS1720083 1059 - 0.386213
NA TDE1462 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS1511745 555 + 0.367568
NA TDE2731 TIM-barrel protein, putative, NifR3 familychromosome CDS2787512 1002 + 0.472056
NA TDE2713 RNA methyltransferase, TrmH familychromosome CDS2769647 768 - 0.408854
NA TDE0122 dihydrouridine synthase, putativechromosome CDS140616 1014 - 0.423077
NA TDE1258 grdX proteinchromosome CDS1291878 396 - 0.386364
alaS TDE1659 alanyl-tRNA synthetasechromosome CDS1708921 1803 - 0.423184
argS TDE0971 arginyl-tRNA synthetasechromosome CDS995319 1773 + 0.41568
asnS TDE0980 asparaginyl-tRNA synthetasechromosome CDS1004069 1422 - 0.439522
aspS TDE1587 aspartyl-tRNA synthetasechromosome CDS1634173 1773 + 0.451213
cysS TDE0092 cysteinyl-tRNA synthetasechromosome CDS109867 1479 - 0.391481
def TDE1645 polypeptide deformylasechromosome CDS1695633 510 - 0.352941
efp TDE0968 translation elongation factor Pchromosome CDS992653 564 - 0.411348
fmt TDE1644 methionyl-tRNA formyltransferasechromosome CDS1694668 969 - 0.408669
frr TDE2345 ribosome recycling factorchromosome CDS2382036 558 - 0.399642
ftsJ TDE1968 cell division protein FtsJchromosome CDS1982583 600 - 0.406667
fusA-1 TDE0285 translation elongation factor Gchromosome CDS313762 2052 + 0.463938
fusA-2 TDE1049 translation elongation factor Gchromosome CDS1075427 2088 + 0.441092
gatA TDE0576 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS607816 1458 - 0.438957
gatB TDE0575 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS606342 1482 - 0.431849
gatC TDE0577 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS609288 312 - 0.387821
gltX TDE0204 glutamyl-tRNA synthetasechromosome CDS237108 1521 + 0.429323
glyS TDE0020 glycyl-tRNA synthetasechromosome CDS25586 1356 + 0.39233
grdA TDE0745 glycine reductase complex selenoprotein GrdAchromosome CDS780427 474 + 0.470464
hisS TDE1442 histidyl-tRNA synthetasechromosome CDS1487556 1347 + 0.399406
ileS TDE2663 isoleucyl-tRNA synthetasechromosome CDS2698706 3303 - 0.423554
infA TDE2087 translation initiation factor IF-1chromosome CDS2115558 219 - 0.406393
infB TDE1106 translation initiation factor IF-2chromosome CDS1138282 2691 - 0.451877
infC TDE2156 translation initiation factor IF-3chromosome CDS2190282 528 - 0.422348
ksgA TDE1080 dimethyladenosine transferasechromosome CDS1111878 882 + 0.378685
leuS TDE2339 leucyl-tRNA synthetasechromosome CDS2374985 2577 + 0.434614
lysS TDE2553 lysyl-tRNA synthetasechromosome CDS2579137 1587 - 0.447385
map TDE1733 methionine aminopeptidase, type Ichromosome CDS1787993 747 + 0.432396
miaA-1 TDE0057 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS66075 987 + 0.422492
miaA-2 TDE1447 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1492752 897 + 0.41806
miaB TDE1576 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS1622918 1356 + 0.39528
pheS TDE0109 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS128923 1548 - 0.425711
pheT TDE1927 phenylalanyl-tRNA synthetase, beta subunitchromosome CDS1944124 1755 + 0.426211
pnp TDE1041 polyribonucleotide nucleotidyltransferasechromosome CDS1068464 2097 + 0.45732
prfA TDE2489 peptide chain release factor 1chromosome CDS2511481 1086 - 0.459484
proS TDE2220 prolyl-tRNA synthetasechromosome CDS2261025 1788 + 0.436242
pth TDE0643 peptidyl-tRNA hydrolasechromosome CDS679306 612 - 0.406863
queA TDE2451 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS2479972 1044 + 0.434866
rbfA TDE1105 ribosome-binding factor Achromosome CDS1137891 399 - 0.41604
rimM TDE0883 16S rRNA processing protein RimMchromosome CDS901825 540 + 0.418519
rluB TDE0875 ribosomal large subunit pseudouridine synthase Bchromosome CDS897629 705 + 0.408511
rnpA TDE2399 ribonuclease P protein componentchromosome CDS2425894 357 - 0.378151
rplA TDE2424 ribosomal protein L1chromosome CDS2454127 681 - 0.459618
rplB TDE0770 ribosomal protein L2chromosome CDS808092 831 + 0.464501
rplC TDE0767 ribosomal protein L3chromosome CDS806495 627 + 0.430622
rplD TDE0768 ribosomal protein L4chromosome CDS807136 636 + 0.40566
rplE TDE0779 ribosomal protein L5chromosome CDS811941 552 + 0.423913
rplF TDE0782 ribosomal protein L6chromosome CDS813110 540 + 0.418519
rplI TDE1675 ribosomal protein L9chromosome CDS1728733 600 - 0.386667
rplJ TDE2423 ribosomal protein L10chromosome CDS2453507 618 - 0.454693
rplK TDE2425 ribosomal protein L11chromosome CDS2454809 432 - 0.462963
rplL TDE2422 ribosomal protein L7/L12chromosome CDS2453001 390 - 0.448718
rplM TDE0852 ribosomal protein L13chromosome CDS875159 429 + 0.428904
rplN TDE0777 ribosomal protein L14chromosome CDS811249 369 + 0.420054
rplO TDE0786 ribosomal protein L15chromosome CDS814742 453 + 0.415011
rplP TDE0774 ribosomal protein L16chromosome CDS810305 420 + 0.45
rplQ TDE0792 ribosomal protein L17chromosome CDS818527 540 + 0.4
rplR TDE0783 ribosomal protein L18chromosome CDS813660 363 + 0.426997
rplS TDE0885 ribosomal protein L19chromosome CDS903085 360 + 0.408333
rplT TDE2154 ribosomal protein L20chromosome CDS2189665 360 - 0.441667
rplU TDE1751 ribosomal protein L21chromosome CDS1803921 312 - 0.413462
rplV TDE0772 ribosomal protein L22chromosome CDS809224 357 + 0.434174
rplW TDE0769 ribosomal protein L23chromosome CDS807774 285 + 0.403509
rplX TDE0778 ribosomal protein L24chromosome CDS811627 315 + 0.428571
rpmA TDE1749 ribosomal protein L27chromosome CDS1803248 252 - 0.43254
rpmB TDE0991 ribosomal protein L28chromosome CDS1017964 192 - 0.364583
rpmC TDE0775 ribosomal protein L29chromosome CDS810737 210 + 0.366667
rpmD TDE0785 ribosomal protein L30chromosome CDS814557 186 + 0.38172
rpmE TDE1504 ribosomal protein L31chromosome CDS1553490 204 + 0.357843
rpmF TDE1025 ribosomal protein L32chromosome CDS1057241 189 + 0.428571
rpmG TDE2428 ribosomal protein L33chromosome CDS2456212 171 - 0.345029
rpmH TDE2400 ribosomal protein L34chromosome CDS2426262 156 - 0.480769
rpmI TDE2155 ribosomal protein L35chromosome CDS2190055 201 - 0.393035
rpmJ TDE0788 ribosomal protein L36chromosome CDS816572 114 + 0.333333
rpsB TDE2347 ribosomal protein S2chromosome CDS2383593 876 - 0.407534
rpsC TDE0773 ribosomal protein S3chromosome CDS809583 720 + 0.444444
rpsD TDE1943 ribosomal protein S4chromosome CDS1959526 621 - 0.397746
rpsE TDE0784 ribosomal protein S5chromosome CDS814031 522 + 0.44636
rpsF TDE1678 ribosomal protein S6chromosome CDS1730292 282 - 0.390071
rpsG TDE1048 ribosomal protein S7chromosome CDS1074622 471 + 0.469214
rpsH TDE0781 ribosomal protein S8chromosome CDS812701 399 + 0.408521
rpsI TDE0853 ribosomal protein S9chromosome CDS875613 375 + 0.445333
rpsJ TDE0766 ribosomal protein S10chromosome CDS806124 309 + 0.423948
rpsK TDE0790 ribosomal protein S11chromosome CDS817091 381 + 0.451444
rpsL TDE1047 ribosomal protein S12chromosome CDS1074237 375 + 0.485333
rpsM TDE0789 ribosomal protein S13chromosome CDS816702 366 + 0.437158
rpsN TDE0780 ribosomal protein S14chromosome CDS812504 186 + 0.446237
rpsO TDE1040 ribosomal protein S15chromosome CDS1068079 270 + 0.407407
rpsP TDE0881 ribosomal protein S16chromosome CDS901307 246 + 0.398374
rpsQ TDE0776 ribosomal protein S17chromosome CDS810958 273 + 0.406593
rpsR TDE1676 ribosomal protein S18chromosome CDS1729463 270 - 0.418519
rpsS TDE0771 ribosomal protein S19chromosome CDS808935 279 + 0.397849
rpsT TDE1710 ribosomal protein S20chromosome CDS1765306 270 - 0.440741
rpsU TDE2473 ribosomal protein S21chromosome CDS2496438 210 + 0.366667
rsuA TDE0860 ribosomal small subunit pseudouridine synthase Achromosome CDS881163 738 + 0.411924
selB TDE1963 selenocysteine-specific translation elongation factorchromosome CDS1975429 1773 + 0.423012
serS TDE2307 seryl-tRNA synthetasechromosome CDS2344325 1269 - 0.441292
tgt TDE0438 queuine tRNA-ribosyltransferasechromosome CDS493762 1140 - 0.407018
thrS TDE1090 threonyl-tRNA synthetasechromosome CDS1121246 1758 + 0.431741
trmD TDE0884 tRNA (guanine-N1)-methyltransferasechromosome CDS902361 732 + 0.435792
trmU TDE0690 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS727038 1101 + 0.394187
truA TDE2275 tRNA pseudouridine synthase Achromosome CDS2311216 807 + 0.425031
truB TDE1104 tRNA pseudouridine synthase Bchromosome CDS1136803 1074 - 0.368715
tsf TDE2346 translation elongation factor Tschromosome CDS2382677 843 - 0.409253
tuf TDE0765 translation elongation factor Tuchromosome CDS804872 1188 + 0.442761
tyrS TDE0861 tyrosyl-tRNA synthetasechromosome CDS881968 1221 - 0.434889
valS TDE1364 valyl-tRNA synthetasechromosome CDS1404903 2730 + 0.432234
ychF TDE0305 GTP-binding protein YchFchromosome CDS335735 1107 - 0.442638