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2024-05-01 21:35:33

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Rickettsia typhi str. Wilmington, Wilmington

Number of genes found: 125

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rickettsia typhi str. Wilmington, Wilmington
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RT0656 tRNA/rRNA methyltransferasechromosome CDS830323 747 + 0.291834
NA RT0761 conserved hypothetical proteinchromosome CDS963411 477 + 0.287212
NA RT0503 probable sigma(54) modulation proteinchromosome CDS643815 351 - 0.253561
NA RT0010 NifR3-like proteinchromosome CDS9295 984 + 0.378049
NA RT0592 probable GTP-binding proteinchromosome CDS769896 1098 - 0.32969
NA RT0819 cytosine deaminasechromosome CDS1044520 447 - 0.315436
NA RT0837 conserved hypothetical proteinchromosome CDS1068214 942 - 0.33121
alaS RT0845 alanine--tRNA ligasechromosome CDS1077967 2634 + 0.321185
argS RT0067 arginine--tRNA ligasechromosome CDS87419 1731 - 0.317735
aspS RT0134 aspartate--tRNA ligasechromosome CDS173816 1818 + 0.338284
cysS RT0051 cysteine--tRNA ligasechromosome CDS64418 1374 - 0.30786
def RT0197 peptide deformylasechromosome CDS254055 528 + 0.339015
efp RT0230 elongation factor Pchromosome CDS294831 567 + 0.29806
fmt RT0198 methionyl-tRNA formyltransferasechromosome CDS254594 897 + 0.329989
frr RT0143 ribosome recycling factorchromosome CDS185259 561 - 0.333333
ftsJ RT0153 rRNA (uridine-2'-O-)-methyltransferase (23S ribosomal RNA methyltransferase)chromosome CDS194386 684 + 0.318713
fusA RT0121 elongation factor Gchromosome CDS154647 2100 + 0.344286
gatA RT0141 glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit Achromosome CDS182969 1482 - 0.356275
gatB RT0140 glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit Bchromosome CDS181363 1452 - 0.323691
gatC RT0142 glutaminyl-tRNA synthase (glutamine-hydrolyzing) subunit Cchromosome CDS184453 303 - 0.280528
gltX1 RT0316 glutamate--tRNA ligasechromosome CDS399542 1347 - 0.299183
gltX2 RT0614 glutamate--tRNA ligasechromosome CDS800628 1410 + 0.326241
glyQ RT0839 glycine--tRNA ligase alpha subunitchromosome CDS1071291 870 - 0.356322
glyS RT0838 glycine--tRNA ligase beta subunitchromosome CDS1069304 1995 - 0.285714
hemK RT0836 bifunctional methyltransferasechromosome CDS1066692 1557 + 0.290944
hisS RT0298 histidine--tRNA ligasechromosome CDS377945 1239 + 0.307506
ileS RT0606 isoleucine--tRNA ligasechromosome CDS786574 3261 + 0.341306
infA RT0802 translation initiation factor IF-1chromosome CDS1023862 216 + 0.361111
infB RT0539 translation initiation factor IF-2chromosome CDS688406 2496 - 0.336538
infC RT0518 translation initiation factor IF-3chromosome CDS660053 558 - 0.31362
ksgA RT0666 dimethyladenosine transferasechromosome CDS842516 807 - 0.301115
leuS RT0407 leucine--tRNA ligasechromosome CDS518641 2487 + 0.318858
lysS RT0359 lysine--tRNA ligasechromosome CDS453256 1581 + 0.337761
map RT0812 methionyl aminopeptidasechromosome CDS1038759 780 + 0.344872
metS RT0678 methionine--tRNA ligasechromosome CDS858375 1524 - 0.323491
miaA RT0495 tRNA isopentenyltransferasechromosome CDS631818 936 + 0.288462
miaB1 RT0402 tRNA-methylthiotransferase (MiaB protein)chromosome CDS511695 1266 + 0.323065
miaB2 RT0795 tRNA-methylthiotransferase (MiaB protein)chromosome CDS1017189 1338 - 0.324365
pcnB RT0014 polynucleotide adenylyltransferasechromosome CDS12738 1164 - 0.262028
pheS RT0403 phenylalanine--tRNA ligase alpha subunitchromosome CDS513084 1053 + 0.31339
pnp RT0489 polyribonucleotide nucleotidyltransferasechromosome CDS624535 2238 + 0.322163
prfA RT0516 peptide chain release factor 1 (RF-1)chromosome CDS657468 1068 - 0.35206
prfB RT0265 peptide chain release factor 2 (RF-2)chromosome CDS333479 1023 - 0.338221
proS RT0372 proline--tRNA ligasechromosome CDS472226 1287 + 0.30303
pth RT0593 aminoacyl-tRNA hydrolasechromosome CDS771512 558 - 0.283154
queA RT0204 S-adenosylmethionine tRNA ribosyltransferase-isomerasechromosome CDS261210 1128 - 0.299645
rbfA RT0422 ribosome-binding factor Achromosome CDS533157 384 - 0.260417
rhlE RT0661 probable ATP-dependent RNA helicase RhlEchromosome CDS837222 1224 - 0.329248
rimJ RT0688 ribosomal-protein-alanine N-acetyltransferasechromosome CDS874913 552 - 0.300725
rimM RT0337 16S rRNA processing protein RimMchromosome CDS429605 498 - 0.238956
rluB RT0532 ribosomal large subunit pseudouridylate synthase Bchromosome CDS680982 729 + 0.283951
rluC RT0249 ribosomal large subunit pseudouridylate synthase Cchromosome CDS316021 912 + 0.282895
rluD RT0834 ribosomal large subunit pseudouridylate synthase Dchromosome CDS1065246 942 + 0.321656
rnd1 RT0408 ribonuclease Dchromosome CDS521384 612 - 0.279412
rnd2 RT0449 ribonuclease Dchromosome CDS574970 846 - 0.242317
rne RT0248 ribonuclease Echromosome CDS312244 2052 + 0.302632
rnpA RT0599 ribonuclease Pchromosome CDS774846 357 + 0.254902
rph RT0619 tRNA nucleotidyltransferasechromosome CDS810065 507 - 0.378698
rplA RT0126 50S ribosomal protein L1chromosome CDS158545 714 + 0.312325
rplB RT0648 50S ribosomal protein L2chromosome CDS825599 822 - 0.343066
rplC RT0651 50S ribosomal protein L3chromosome CDS827577 648 - 0.317901
rplD RT0650 50S ribosomal protein L4chromosome CDS826714 624 - 0.314103
rplE RT0639 50S ribosomal protein L5chromosome CDS822112 540 - 0.268519
rplF RT0636 50S ribosomal protein L6chromosome CDS820830 534 - 0.294007
rplI RT0089 50S ribosomal protein L9chromosome CDS116339 516 - 0.304264
rplJ RT0127 50S ribosomal protein L10chromosome CDS159348 510 + 0.339216
rplK RT0125 50S ribosomal protein L11chromosome CDS158105 438 + 0.3379
rplL RT0128 50S ribosomal protein L7/L12chromosome CDS160038 378 + 0.34127
rplM RT0225 50S ribosomal protein L13chromosome CDS290453 468 + 0.32265
rplN RT0641 50S ribosomal protein L14chromosome CDS822976 369 - 0.346883
rplO RT0632 50S ribosomal protein L15chromosome CDS819219 453 - 0.253863
rplP RT0644 50S ribosomal protein L16chromosome CDS823848 411 - 0.374696
rplQ RT0626 50S ribosomal protein L17chromosome CDS814945 414 - 0.309179
rplR RT0635 50S ribosomal protein L18chromosome CDS820458 357 - 0.288515
rplS RT0024 50S ribosomal protein L19chromosome CDS25526 417 - 0.333333
rplT RT0597 50S ribosomal protein L20chromosome CDS774213 354 + 0.338983
rplU RT0736 50S ribosomal protein L21chromosome CDS935977 318 + 0.305031
rplV RT0646 50S ribosomal protein L22chromosome CDS824928 360 - 0.291667
rplW RT0649 50S ribosomal protein L23chromosome CDS826421 297 - 0.215488
rplX RT0640 50S ribosomal protein L24chromosome CDS822638 342 - 0.28655
rplY RT0594 50S ribosomal protein L25chromosome CDS772293 612 - 0.318627
rpmA RT0737 50S ribosomal protein L27chromosome CDS936319 261 + 0.356322
rpmB RT0038 50S ribosomal protein L28chromosome CDS49441 294 - 0.316327
rpmC RT0643 50S ribosomal protein L29chromosome CDS823640 216 - 0.231481
rpmD RT0633 50S ribosomal protein L30chromosome CDS819685 192 - 0.208333
rpmE RT0037 50S ribosomal protein L31chromosome CDS49208 237 - 0.295359
rpmF RT0760 50S ribosomal protein L32chromosome CDS963120 198 - 0.338384
rpmG RT0870 50S ribosomal protein L33chromosome CDS1102542 171 - 0.280702
rpmH RT0598 50S ribosomal protein L34chromosome CDS774692 135 + 0.311111
rpmI RT0596 50S ribosomal protein L35chromosome CDS773991 207 + 0.323671
rpmJ RT0443 50S ribosomal protein L36chromosome CDS568342 126 - 0.261905
rpsA RT0508 30S ribosomal protein S1chromosome CDS646852 1707 - 0.308143
rpsB RT0050 30S ribosomal protein S2chromosome CDS63126 888 - 0.30518
rpsC RT0645 30S ribosomal protein S3chromosome CDS824273 654 - 0.30581
rpsD RT0335 30S ribosomal protein S4chromosome CDS424413 618 - 0.33657
rpsE RT0634 30S ribosomal protein S5chromosome CDS819914 528 - 0.344697
rpsF RT0091 30S ribosomal protein S6chromosome CDS117178 366 - 0.265027
rpsG RT0120 30S ribosomal protein S7chromosome CDS154152 483 + 0.331263
rpsH RT0637 30S ribosomal protein S8chromosome CDS821372 399 - 0.273183
rpsI RT0226 30S ribosomal protein S9chromosome CDS290927 486 + 0.312757
rpsJ RT0652 30S ribosomal protein S10chromosome CDS828225 318 - 0.323899
rpsK RT0628 30S ribosomal protein S11chromosome CDS816412 384 - 0.348958
rpsL RT0119 30S ribosomal protein S12chromosome CDS153730 390 + 0.387179
rpsM RT0629 30S ribosomal protein S13chromosome CDS816821 378 - 0.330688
rpsN RT0638 30S ribosomal protein S14chromosome CDS821789 306 - 0.323529
rpsO RT0488 30S ribosomal protein S15chromosome CDS624114 276 + 0.297101
rpsP RT0869 30S ribosomal protein S16chromosome CDS1102200 336 - 0.360119
rpsQ RT0642 30S ribosomal protein S17chromosome CDS823405 249 - 0.293173
rpsR RT0090 30S ribosomal protein S18chromosome CDS116866 288 - 0.298611
rpsS RT0647 30S ribosomal protein S19chromosome CDS825296 279 - 0.301075
rpsT RT0625 30S ribosomal protein S20chromosome CDS814653 273 - 0.25641
rpsU RT0604 30S ribosomal protein S21chromosome CDS785049 201 - 0.338308
serS RT0770 serine--tRNA ligasechromosome CDS980639 1278 + 0.316119
tgt RT0707 queuine tRNA-ribosyltransferasechromosome CDS903688 1086 - 0.365562
thrS RT0212 threonine--tRNA ligasechromosome CDS272365 1908 + 0.352201
tlyA RT0543 hemolysinchromosome CDS694675 756 - 0.306878
trmD RT0025 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS25959 705 - 0.35461
trmU RT0296 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS375269 1077 + 0.350975
trpS RT0455 tryptophan--tRNA ligasechromosome CDS584997 993 - 0.298087
truA RT0846 tRNA pseudouridylate synthase Achromosome CDS1081936 738 - 0.322493
truB RT0487 tRNA pseudouridylate synthase Bchromosome CDS623210 879 + 0.30603
tsf RT0049 elongation factor Tschromosome CDS62040 930 - 0.313978
tuf RT0653 elongation factor Tuchromosome CDS828636 1185 - 0.377215
tyrS RT0544 tyrosine--tRNA ligasechromosome CDS695583 1236 - 0.339806
valS RT0682 valine--tRNA ligasechromosome CDS864120 2445 + 0.330879