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2024-04-30 06:57:36

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Haemophilus ducreyi 35000HP, 35000HP

Number of genes found: 158

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Haemophilus ducreyi 35000HP, 35000HP
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA HD0226 conserved hypothetical proteinchromosome CDS164055 1428 - 0.405462
NA HD0876 conserved probable ribonucleasechromosome CDS699752 840 - 0.377381
NA HD0438 conserved putative tRNA/rRNA methyltransferasechromosome CDS344631 1050 - 0.381905
NA HD1052 probable pseudouridine synthasechromosome CDS837343 1065 + 0.412207
NA HD0448 putative dehydrogenasechromosome CDS354269 963 + 0.384216
NA HD1770 putative nitrogen regulator proteinchromosome CDS1483291 978 - 0.375256
NA HD1105 conserved hypothetical proteinchromosome CDS880491 318 - 0.31761
NA HD1547 hypothetical proteinchromosome CDS1273271 333 - 0.366366
NA HD0156 conserved hypothetical proteinchromosome CDS106110 831 + 0.444043
NA HD1357 conserved possible translation initiation factorchromosome CDS1110383 312 + 0.391026
NA HD0322 conserved hypothetical proteinchromosome CDS257643 354 - 0.398305
NA HD1138 probable pseudouridine synthase Rlu family proteinchromosome CDS904995 732 - 0.39071
NA HD1215 conserved hypothetical proteinchromosome CDS986581 390 + 0.387179
NA HD1051 conserved hypothetical proteinchromosome CDS836666 618 + 0.368932
NA HD0376 conserved hypothetical proteinchromosome CDS295204 972 - 0.404321
NA HD1896 conserved hypothetical proteinchromosome CDS1595656 1332 - 0.361111
NA HD0995 putative GTP-binding proteinchromosome CDS790412 1092 - 0.40293
NA HD1686 putative adenine-specific methylasechromosome CDS1404680 945 + 0.369312
NA HD0308 probable tRNA/rRNA methyltransferasechromosome CDS238123 480 + 0.35
NA HD0478 probable RNA methyltransferase gene fragmentchromosome CDS376645 642 - 0.373832
NA HD1664 probable tRNA/rRNA methyltransferasechromosome CDS1386544 729 + 0.386831
NA HD1200 conserved hypothetical proteinchromosome CDS976714 315 - 0.342857
NA HD1535 hypothetical proteinchromosome CDS1269386 306 + 0.401961
NA HD0414 conserved hypothetical proteinchromosome CDS328232 555 + 0.34955
NA HD1591 conserved hypothetical proteinchromosome CDS1313738 552 + 0.398551
NA HD0270 putative tRNA/rRNA methyltransferasechromosome CDS205071 741 - 0.406208
alaS HD1429 alanyl-tRNA synthetasechromosome CDS1169725 2625 + 0.380952
ansB HD0372 L-asparaginase IIchromosome CDS290711 1050 - 0.411429
argS HD0268 arginyl-tRNA synthetasechromosome CDS202020 1686 + 0.379597
asnS HD1411 asparaginyl-tRNA synthetasechromosome CDS1155010 1404 - 0.397436
aspS HD0599 aspartyl-tRNA synthetasechromosome CDS458909 1770 - 0.40226
cafA HD1631 ribonuclease Gchromosome CDS1352312 1473 - 0.373388
cca HD1091 tRNA nucleotidyltransferasechromosome CDS868356 1239 - 0.396287
cysS HD1093 cysteinyl-tRNA synthetasechromosome CDS870350 1380 + 0.388406
deaD HD1590 cold-shock DEAD box protein-Achromosome CDS1311864 1821 + 0.403624
def HD1889 peptide deformylasechromosome CDS1588178 516 + 0.375969
dtd HD0745 D-tyrosyl-tRNA (Tyr) deacylasechromosome CDS586563 447 + 0.411633
efp HD1407 elongation factor Pchromosome CDS1152557 567 - 0.391534
fmt HD2029 methionyl-tRNA formyltransferasechromosome CDS1691995 951 + 0.403785
frr HD1596 ribosome recycling factorchromosome CDS1317344 558 - 0.360215
ftsJ HD1501 ribosomal RNA large subunit methyltransferase Jchromosome CDS1233514 627 - 0.413078
fusA HD0657 elongation factor Gchromosome CDS518964 2106 + 0.408357
genX HD0029 lysine--tRNA ligasechromosome CDS27251 984 - 0.413618
glnS HD1404 glutaminyl-tRNA synthetasechromosome CDS1150589 1671 - 0.374626
gltX HD0320 glutamyl-tRNA synthetasechromosome CDS255170 1440 + 0.392361
glyQ HD1943 glycyl-tRNA synthetase alpha subunitchromosome CDS1632093 909 - 0.39824
glyS HD1942 glycyl-tRNA synthetase beta subunitchromosome CDS1629987 2067 - 0.430576
hemK HD0855 Protein-glutamine N-methyl transferasechromosome CDS682982 873 + 0.388316
hisS HD1039 histidyl-tRNA synthetasechromosome CDS829393 1272 + 0.389151
hslR HD0842 heat shock protein 15chromosome CDS670384 420 + 0.442857
ileS HD0272 isoleucyl-tRNA synthetasechromosome CDS207310 2808 - 0.405271
infA HD0361 translation initiation factor IF-1chromosome CDS280938 219 + 0.378995
infB HD1461 translation initiation factor IF-2chromosome CDS1195996 2520 - 0.413889
infC HD1802 translation initiation factor IF-3chromosome CDS1506442 579 - 0.369603
ksgA HD1179 dimethyladenosine transferasechromosome CDS956945 870 - 0.364368
leuS HD1132 leucyl-tRNA synthetasechromosome CDS898676 2586 - 0.395592
lysS HD1318 lysyl-tRNA synthetasechromosome CDS1073627 1497 + 0.455578
map HD0248 methionine aminopeptidasechromosome CDS189019 807 - 0.377943
miaA HD0742 tRNA delta-2-isopentylpyrophosphate transferasechromosome CDS582837 942 - 0.420382
oapA HD0651 opacity associated protein Achromosome CDS514878 1230 + 0.370732
pcnB HD0604 polyA polymerasechromosome CDS463910 1572 + 0.382952
pheS HD1484 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS1220830 984 - 0.375
pnp HD1588 polyribonucleotide nucleotidyltransferasechromosome CDS1308506 2139 + 0.420757
prfA HD0853 peptide chain release factor 1 (RF-1)chromosome CDS681783 1083 + 0.402585
prfB HD0575 peptide chain release factor 2chromosome CDS444654 1056 - 0.392992
prfC HD0351 peptide chain release factor 3chromosome CDS272333 1581 + 0.385199
prmA HD0016 ribosomal protein L11 methyltransferasechromosome CDS20276 882 + 0.419501
proS HD1919 prolyl-tRNA synthetasechromosome CDS1612594 1716 - 0.421911
pth HD0996 peptidyl-tRNA hydrolasechromosome CDS791604 603 - 0.393035
queA HD1257 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1021839 1086 - 0.398711
rbfA HD1460 ribosome binding factor Achromosome CDS1195555 381 - 0.351706
rimK HD1238 ribosomal protein S6 modification proteinchromosome CDS1005195 918 + 0.40305
rimM HD1948 16S rRNA processing protein RimMchromosome CDS1635672 528 - 0.386364
rluA HD1762 ribosomal large subunit pseudouridine synthase Achromosome CDS1472701 669 - 0.394619
rluB HD0337 probable pseudouridylate synthasechromosome CDS264722 690 - 0.394203
rluC HD0645 ribosomal large subunit pseudouridine synthase Cchromosome CDS507141 963 - 0.413292
rluD HD0469 pseudouridine synthasechromosome CDS368975 978 - 0.40184
rnd HD1478 ribonuclease Dchromosome CDS1214014 1122 - 0.342246
rne HD0194 ribonuclease Echromosome CDS137451 2943 - 0.41896
rnpA HD0752 ribonuclease P protein componentchromosome CDS592839 372 - 0.400538
rph HD0301 ribonuclease PHchromosome CDS232099 717 - 0.430962
rplA HD1882 50S ribosomal protein L1chromosome CDS1582146 690 - 0.388406
rplB HD1980 50S ribosomal protein L2chromosome CDS1648523 822 - 0.406326
rplC HD1983 50S ribosomal protein L3chromosome CDS1650285 627 - 0.398724
rplD HD1982 50S ribosomal protein L4chromosome CDS1649667 603 - 0.373134
rplE HD1966 50S ribosomal protein L5chromosome CDS1644017 540 - 0.37963
rplF HD1963 50S ribosomal protein L6chromosome CDS1642727 534 - 0.395131
rplI HD1048 50S ribosomal protein L9chromosome CDS834267 450 + 0.426667
rplJ HD1881 50S ribosomal protein L10chromosome CDS1581381 492 - 0.408537
rplK HD1884 50S ribosomal protein L11chromosome CDS1582840 429 - 0.412587
rplL HD1879 50S ribosomal protein L7/L12chromosome CDS1580958 363 - 0.404959
rplM HD1494 50S ribosomal protein L13chromosome CDS1226341 423 - 0.390071
rplN HD1968 50S ribosomal protein L14chromosome CDS1644896 372 - 0.422043
rplO HD1959 50S ribosomal protein L15chromosome CDS1641219 435 - 0.386207
rplP HD1976 50S ribosomal protein L16chromosome CDS1646727 411 - 0.428224
rplQ HD1950 50S ribosomal protein L17chromosome CDS1636724 384 - 0.398438
rplR HD1962 50S ribosomal protein L18chromosome CDS1642359 354 - 0.440678
rplS HD1946 50S ribosomal protein L19chromosome CDS1634484 351 - 0.39886
rplT HD1799 50S ribosomal protein L20chromosome CDS1505572 354 - 0.398305
rplU HD0203 50S ribosomal protein L21chromosome CDS148390 312 + 0.407051
rplV HD1978 50S ribosomal protein L22chromosome CDS1647873 333 - 0.384384
rplW HD1981 50S ribosomal protein L23chromosome CDS1649365 306 - 0.372549
rplX HD1967 50S ribosomal protein L24chromosome CDS1644574 312 - 0.314103
rplY HD1249 50S ribosomal protein L25chromosome CDS1015461 288 + 0.392361
rpmA HD0205 50S ribosomal protein L27chromosome CDS148722 258 + 0.399225
rpmB HD0731 50S ribosomal protein L28chromosome CDS576325 237 - 0.417722
rpmC HD1975 50S ribosomal protein L29chromosome CDS1646536 192 - 0.385417
rpmD HD1960 50S ribosomal protein L30chromosome CDS1641658 180 - 0.338889
rpmE1 HD1722 50S ribosomal protein L31chromosome CDS1435177 213 - 0.370892
rpmE2 HD1927 50S ribosomal protein L31 type Bchromosome CDS1621152 270 - 0.37037
rpmF HD0772 50S ribosomal protein L32chromosome CDS606262 171 + 0.421053
rpmG HD0730 50S ribosomal protein L33chromosome CDS576143 171 - 0.304094
rpmH HD0753 50S ribosomal protein L34chromosome CDS593243 135 - 0.422222
rpmI HD1800 50S ribosomal protein L35chromosome CDS1506002 198 - 0.373737
rpmJ1 HD1926 50S ribosomal protein L36chromosome CDS1621015 126 - 0.365079
rpmJ2 HD1955 50S ribosomal protein L36chromosome CDS1639753 114 - 0.368421
rpsA HD1352 30S ribosomal protein S1chromosome CDS1106027 1668 + 0.369305
rpsB HD1600 30S ribosomal protein S2chromosome CDS1321542 717 - 0.37378
rpsC HD1977 30S ribosomal protein S3chromosome CDS1647151 705 - 0.411348
rpsD HD1952 30S ribosomal protein S4chromosome CDS1638199 627 - 0.392345
rpsE HD1961 30S ribosomal protein S5chromosome CDS1641844 501 - 0.417166
rpsF HD1045 30S ribosomal protein S6chromosome CDS833324 375 + 0.394667
rpsG HD0656 30S ribosomal protein S7chromosome CDS518395 471 + 0.414013
rpsH HD1964 30S ribosomal protein S8chromosome CDS1643276 393 - 0.37659
rpsI HD1493 30S ribosomal protein S9chromosome CDS1225929 396 - 0.426768
rpsJ HD1984 30S ribosomal protein S10chromosome CDS1650937 312 - 0.384615
rpsK HD1953 30S ribosomal protein S11chromosome CDS1638854 390 - 0.461538
rpsL HD0655 30S ribosomal protein S12chromosome CDS517884 375 + 0.434667
rpsM HD1954 30S ribosomal protein S13chromosome CDS1639260 357 - 0.408964
rpsN HD1965 30S ribosomal protein S14chromosome CDS1643700 306 - 0.411765
rpsO HD1738 30S ribosomal protein S15chromosome CDS1451444 270 + 0.388889
rpsP HD1949 30S ribosomal protein S16chromosome CDS1636232 249 - 0.461847
rpsQ HD1974 30S ribosomal protein S17chromosome CDS1646282 255 - 0.34902
rpsR HD1047 30S ribosomal protein S18chromosome CDS834022 228 + 0.412281
rpsS HD1979 30S ribosomal protein S19chromosome CDS1648218 276 - 0.42029
rpsT HD1990 30S ribosomal protein S20chromosome CDS1655872 270 + 0.381481
rpsU HD0689 30S ribosomal protein s21chromosome CDS544413 216 + 0.388889
rsmC HD0210 putative ribosomal RNA small subunit methyltransferase Cchromosome CDS151724 990 - 0.407071
rsuA HD1057 ribosomal small subunit pseudouridine synthase Achromosome CDS842281 693 + 0.388167
rumA HD1765 23S rRNA (Uracil-5-)-methyltransferasechromosome CDS1476563 1329 + 0.374718
selB HD1993 selenocysteine-specific elongation factorchromosome CDS1658931 1869 - 0.384698
serS HD1133 seryl-tRNA synthetasechromosome CDS901412 1308 - 0.402905
smpA HD1212 small protein Achromosome CDS985049 384 - 0.330729
srmB HD0213 ATP-dependent RNA helicase proteinchromosome CDS153787 1329 + 0.410083
sun HD1992 SUN proteinchromosome CDS1657574 1308 - 0.396024
tgt HD1368 queuine tRNA-ribosyltransferasechromosome CDS1116293 1149 + 0.390775
thrS HD1803 threonyl-tRNA synthetasechromosome CDS1507243 1932 - 0.401139
trmA HD0723 tRNA (uracil-5-)-methyltransferasechromosome CDS570980 1110 - 0.398198
trmD HD1947 tRNA (guanine-N1)-methyltransferasechromosome CDS1634859 756 - 0.427249
trmU HD0389 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS308379 1155 + 0.398268
trpS HD0177 tryptophanyl-tRNA synthetasechromosome CDS118266 1029 + 0.376093
truA HD1104 tRNA pseudouridine synthase Achromosome CDS879647 786 + 0.400763
truB HD1459 tRNA pseudouridine synthase Bchromosome CDS1194634 918 - 0.376906
tsf HD1599 elongation factorchromosome CDS1320591 852 - 0.40493
tufA HD0054 elongation factor tu, EF-Tuchromosome CDS47920 1185 - 0.422785
tufB HD0658 elongation factor Tuchromosome CDS521131 1185 + 0.423629
tyrS HD0693 tyrosyl-tRNA synthetasechromosome CDS548683 1191 - 0.395466
valS HD0669 valyl-tRNA synthetasechromosome CDS529205 2886 + 0.407831