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2024-05-02 20:40:31

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120

Number of genes found: 143

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pro1828 Predicted proteinchromosome CDS1685012 303 - 0.412541
NA Pro1554 Predicted protein family PM-17chromosome CDS1418096 294 + 0.391156
NA Pro0587 Predicted proteinchromosome CDS554663 342 + 0.350877
NA Pro1838 Predicted proteinchromosome CDS1696436 516 - 0.414729
NA Pro0796 Glucosylglycerol-phosphate phosphatase (Salt tolerance protein A)chromosome CDS719298 1230 - 0.304878
NA Pro0168 Uncharacterized proteinchromosome CDS167991 348 + 0.37069
NA Pro0014 tRNA-dihydrouridine synthasechromosome CDS17049 1002 - 0.348303
NA Pro0397 Ribosome-associated protein Ychromosome CDS380947 588 - 0.396259
NA Pro1276 Predicted proteinchromosome CDS1177675 552 + 0.336957
NA Pro1232 Predicted GTPase, probable translation factorchromosome CDS1134012 1092 - 0.377289
NA Pro1617 Predicted rRNA methylasechromosome CDS1470367 813 - 0.389914
NA Pro1523 Predicted protein family PM-17chromosome CDS1393972 357 + 0.383754
GCD1 Pro1320 Nucleotidyl transferase family enzymechromosome CDS1221358 729 + 0.352538
GCD1 Pro0175 Nucleoside-diphosphate-sugar transferasechromosome CDS175769 1170 + 0.384615
SUA5 Pro0360 Putative translation factor (SUA5)chromosome CDS344287 588 + 0.389456
SUI1 Pro0189 Translation initiation factor SUI1chromosome CDS187391 324 + 0.388889
alaS Pro0048 Alanyl-tRNA synthetasechromosome CDS49984 2679 + 0.388578
argS Pro0212 Arginyl-tRNA synthetasechromosome CDS206281 1812 - 0.370861
aspS Pro1852 Aspartyl-tRNA synthetasechromosome CDS1709479 1818 + 0.394939
cafA Pro1657 Ribonucleases G/Echromosome CDS1518963 1836 + 0.345316
citE Pro1299 Ribosomal protein L34chromosome CDS1199583 138 + 0.398551
cspR Pro0975 Predicted rRNA methylasechromosome CDS895241 501 + 0.321357
cumB Pro1036 Cytosine/adenosine deaminasechromosome CDS950547 495 + 0.377778
cysS Pro1235 Cysteinyl-tRNA synthetasechromosome CDS1139321 1500 + 0.377333
def Pro0081 N-formylmethionyl-tRNA deformylasechromosome CDS91268 612 - 0.367647
efp Pro0026 Translation elongation factor Pchromosome CDS27810 561 + 0.392157
fmt Pro0997 Methionyl-tRNA formyltransferasechromosome CDS914148 1020 + 0.317647
frr Pro0521 Ribosome recycling factorchromosome CDS497809 549 - 0.347905
fusA Pro1665 Translation elongation factor EF-Gchromosome CDS1526167 2076 - 0.409441
gatA Pro0750 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitchromosome CDS679321 1461 + 0.395619
gatB Pro0052 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)chromosome CDS56478 1479 + 0.360379
gatC Pro0265 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunitchromosome CDS260894 294 + 0.336735
gid Pro0585 NAD(FAD)-utilizing enzyme possiblychromosome CDS552787 1407 - 0.383085
glnS Pro1400 Glutamyl/glutaminyl-tRNA synthetasechromosome CDS1299901 951 - 0.329127
gltX Pro0471 Glutamyl/glutaminyl-tRNA synthetasechromosome CDS450465 1431 - 0.366876
glyQ Pro1268 Glycyl-tRNA synthetase, alpha subunitchromosome CDS1168897 891 + 0.375982
glyS Pro0831 Glycyl-tRNA synthetase beta subunitchromosome CDS755581 2166 + 0.372576
hemK Pro0359 Methylase of polypeptide chain release factorchromosome CDS343380 882 + 0.385488
hisS Pro0779 Histidyl-tRNA synthetasechromosome CDS705071 1266 + 0.373618
hisZ Pro0936 ATP phosphoribosyltransferasechromosome CDS850027 1176 - 0.333333
ileS Pro0268 Isoleucyl-tRNA synthetasechromosome CDS263154 2910 + 0.354983
infA Pro1246 Translation initiation factor 1 (IF-1)chromosome CDS1149118 282 - 0.446809
infB Pro1649 Translation initiation factor 2chromosome CDS1506662 3405 + 0.425844
infC Pro1798 Translation initiation factor 3chromosome CDS1650298 606 + 0.389439
ksgA Pro0763 Dimethyladenosine transferasechromosome CDS692833 840 + 0.382143
lasT Pro1144 rRNA methylasechromosome CDS1074016 741 + 0.330634
leuS Pro0947 Leucyl-tRNA synthetasechromosome CDS862588 2613 - 0.33142
lysU Pro1779 Lysyl-tRNA synthetasechromosome CDS1632353 1509 - 0.392313
map Pro0475 Methionine aminopeptidasechromosome CDS453442 837 + 0.381123
metG Pro0970 Methionyl-tRNA synthetasechromosome CDS891444 1524 + 0.354331
miaA Pro1797 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1649336 900 + 0.346667
miaB Pro0121 2-methylthioadenine synthetasechromosome CDS128876 1305 + 0.374713
miaB Pro1379 2-methylthioadenine synthetasechromosome CDS1282845 1401 + 0.37045
miaE Pro0385 Probable hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNAchromosome CDS371225 615 + 0.372358
pcnB Pro0164 tRNA nucleotidyltransferase/poly(A) polymerasechromosome CDS163750 1248 + 0.360577
pcnB Pro0334 tRNA nucleotidyltransferase/poly(A) polymerasechromosome CDS322503 1251 - 0.369305
pheS Pro1344 Phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1248203 1008 - 0.384921
pnp Pro1307 Ribonuclease PHchromosome CDS1206287 2169 + 0.402951
prfA Pro1683 Protein chain release factor Achromosome CDS1548317 1098 - 0.403461
prfB Pro1225 Protein chain release factor Bchromosome CDS1128356 432 + 0.351852
prfB Pro0205 Protein chain release factor Bchromosome CDS201482 1071 + 0.393091
prfC Pro1029 Peptide chain release factor RF-3chromosome CDS944297 1668 - 0.382494
prmA Pro1435 Ribosomal protein L11 methylasechromosome CDS1333186 915 - 0.372678
proS Pro0508 Prolyl-tRNA synthetasechromosome CDS483185 1812 - 0.371965
pth Pro0281 Peptidyl-tRNA hydrolasechromosome CDS274138 615 - 0.372358
queA Pro0402 S-adenosylmethionine:tRNA-ribosyltransferase-iso merasechromosome CDS386308 1113 + 0.4115
rbfA Pro0132 Ribosome-binding factor Achromosome CDS135883 393 + 0.381679
rimK Pro0203 Glutathione synthase/Ribosomal protein S6 modification enzymechromosome CDS200150 927 - 0.400216
rimM Pro1764 RimM protein, required for 16S rRNA processingchromosome CDS1618196 531 + 0.34275
rluA Pro0219 23S RNA-specific pseudouridylate synthasechromosome CDS216593 957 - 0.397074
rnd Pro1740 Ribonuclease Dchromosome CDS1593460 645 + 0.362791
rnpA Pro1300 RNAse P protein componentchromosome CDS1199779 384 + 0.348958
rplA Pro0229 Ribosomal protein L1chromosome CDS226123 705 - 0.402837
rplB Pro1709 Ribosomal protein L2chromosome CDS1562444 864 - 0.462963
rplC Pro1712 Ribosomal protein L3chromosome CDS1564246 660 - 0.416667
rplD Pro1711 Ribosomal protein L4chromosome CDS1563611 636 - 0.410377
rplE Pro1700 Ribosomal protein L5chromosome CDS1558624 540 - 0.405556
rplF Pro1698 Ribosomal protein L6P/L9Echromosome CDS1557666 540 - 0.414815
rplI Pro1834 Ribosomal protein L9chromosome CDS1691866 459 + 0.389978
rplJ Pro0228 Ribosomal protein L10chromosome CDS225357 528 - 0.420455
rplK Pro0230 Ribosomal protein L11chromosome CDS226918 426 - 0.434272
rplL Pro0227 Ribosomal protein L7/L12chromosome CDS224905 393 - 0.450382
rplM Pro1686 Ribosomal protein L13chromosome CDS1550185 453 - 0.395143
rplN Pro1702 Ribosomal protein L14chromosome CDS1559605 366 - 0.409836
rplO Pro1695 Ribosomal protein L15chromosome CDS1556149 456 - 0.392544
rplP Pro1705 Ribosomal protein L16/L10Echromosome CDS1560464 549 - 0.45173
rplQ Pro1688 Ribosomal protein L17chromosome CDS1551687 351 - 0.413105
rplR Pro1697 Ribosomal protein L18chromosome CDS1557263 369 - 0.401084
rplS Pro0473 Ribosomal protein L19chromosome CDS452517 483 - 0.438923
rplT Pro1822 Ribosomal protein L20chromosome CDS1680493 348 + 0.382184
rplU Pro1425 Ribosomal protein L21chromosome CDS1326239 459 + 0.359477
rplV Pro1707 Ribosomal protein L22chromosome CDS1561756 375 - 0.426667
rplW Pro1710 Ribosomal protein L23chromosome CDS1563310 309 - 0.407767
rplX Pro1701 Ribosomal protein L24chromosome CDS1559248 357 - 0.361345
rpmA Pro1426 Ribosomal protein L27chromosome CDS1326721 264 + 0.409091
rpmB Pro0933 Ribosomal protein L28chromosome CDS847533 249 - 0.385542
rpmC Pro1704 Ribosomal protein L29chromosome CDS1560254 207 - 0.434783
rpmE Pro1684 Ribosomal protein L31chromosome CDS1549450 285 - 0.396491
rpmF Pro0981 Ribosomal protein L32chromosome CDS900624 174 + 0.454023
rpmG Pro0967 Ribosomal protein L33chromosome CDS889575 198 + 0.424242
rpmI Pro1821 Ribosomal protein L35chromosome CDS1680231 198 + 0.459596
rpmJ Pro1692 Ribosomal protein L36chromosome CDS1554020 117 - 0.461538
rpsA Pro0530 Ribosomal protein S1chromosome CDS506532 1254 - 0.409888
rpsA Pro0351 Ribosomal protein S1chromosome CDS338390 1104 - 0.386775
rpsB Pro0825 Ribosomal protein S2chromosome CDS747785 717 + 0.407252
rpsC Pro1706 Ribosomal protein S3chromosome CDS1561025 732 - 0.42623
rpsD Pro0409 Ribosomal protein S4chromosome CDS393478 609 - 0.446634
rpsE Pro1696 Ribosomal protein S5chromosome CDS1556611 636 - 0.435535
rpsF Pro1874 Ribosomal protein S6chromosome CDS1737245 633 + 0.344392
rpsG Pro1666 Ribosomal protein S7chromosome CDS1528335 471 - 0.426752
rpsH Pro1699 Ribosomal protein S8chromosome CDS1558218 402 - 0.425373
rpsI Pro1685 Ribosomal protein S9chromosome CDS1549778 411 - 0.413625
rpsJ Pro1663 Ribosomal protein S10chromosome CDS1524466 321 - 0.4081
rpsK Pro1690 Ribosomal protein S11chromosome CDS1553076 393 - 0.470738
rpsL Pro1667 Ribosomal protein S12chromosome CDS1528848 375 - 0.469333
rpsM Pro1691 Ribosomal protein S13chromosome CDS1553538 366 - 0.459016
rpsN Pro1306 Ribosomal protein S14chromosome CDS1205795 300 + 0.416667
rpsO Pro0753 Ribosomal protein S15chromosome CDS684948 270 - 0.366667
rpsP Pro1359 Ribosomal protein S16chromosome CDS1259377 396 - 0.424242
rpsQ Pro1703 Ribosomal protein S17chromosome CDS1559967 267 - 0.41573
rpsR Pro0968 Ribosomal protein S18chromosome CDS889807 222 + 0.355856
rpsS Pro1708 Ribosomal protein S19chromosome CDS1562133 276 - 0.402174
rpsT Pro1642 Ribosomal protein S20chromosome CDS1500568 300 - 0.39
rpsU Pro0590 Ribosomal protein S21chromosome CDS556189 180 - 0.366667
rsuA Pro1114 16S rRNA pseudouridylate synthasechromosome CDS1042125 714 + 0.312325
serS Pro1304 Seryl-tRNA synthetasechromosome CDS1203372 1278 + 0.374022
spoU Pro0748 rRNA methylasechromosome CDS677636 1257 + 0.372315
spoU Pro1373 rRNA methylasechromosome CDS1274836 795 - 0.408805
spoU Pro0421 rRNA methylasechromosome CDS403671 690 - 0.415942
srmB Pro1094 Superfamily II DNA/RNA helicasechromosome CDS1020284 1812 + 0.379139
sun Pro0422 tRNA and rRNA cytosine-C5-methylasechromosome CDS404610 1317 + 0.413819
tdcF Pro0560 Putative translation initiation inhibitorchromosome CDS532072 399 - 0.411028
tgt Pro0303 Queuine/archaeosine tRNA-ribosyltransferasechromosome CDS294742 1119 + 0.402145
thrS Pro1064 Threonyl-tRNA synthetasechromosome CDS981485 1932 + 0.336439
trmA Pro0965 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferasechromosome CDS885698 1260 + 0.297619
trmU Pro1365 PredictedtRNA(5-methylaminomethyl-2-thiouridylat e)methyltransferasechromosome CDS1267363 1221 + 0.385749
trpS Pro1063 Tryptophanyl-tRNA synthetasechromosome CDS980466 1020 + 0.316667
truA Pro1687 Pseudouridylate synthasechromosome CDS1550793 870 - 0.371264
truB Pro1428 Pseudouridine synthasechromosome CDS1327826 942 + 0.364119
tsf Pro0826 Translation elongation factor Tschromosome CDS748578 654 + 0.374618
tufB Pro1664 Translation elongation factor EF-Tuchromosome CDS1524921 1200 - 0.433333
tyrS Pro1410 Tyrosyl-tRNA synthetasechromosome CDS1309332 1251 - 0.375699
valS Pro1844 Valyl-tRNA synthetasechromosome CDS1701033 2802 - 0.394361