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2024-05-02 15:33:14

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)

Number of genes found: 116

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS bbp364 alanyl-tRNA synthetasechromosome CDS420763 2643 + 0.251986
argS bbp224 arginyl-tRNA synthetasechromosome CDS264814 1737 - 0.244099
asnS bbp329 asparaginyl-tRNA synthetasechromosome CDS379444 1401 - 0.275517
aspS bbp293 aspartyl-tRNA synthetasechromosome CDS342535 1731 + 0.263432
cca bbp057 tRNA nucleotidyltransferasechromosome CDS64717 1260 + 0.255556
cysS bbp431 cysteinyl-tRNA synthetasechromosome CDS505190 1410 - 0.264539
deaD bbp335 ATP-dependent RNA helicasechromosome CDS390346 1809 - 0.305694
def bbp439 polypeptide deformylasechromosome CDS513039 483 + 0.256729
efp bbp023 elongation factor Pchromosome CDS23004 570 + 0.249123
fmt bbp440 methionyl-tRNA formyltransferasechromosome CDS513523 972 + 0.279835
frr bbp216 ribosome recycling factorchromosome CDS252164 552 + 0.231884
ftsJ bbp346 ribosomal RNA large subunit methyltransferase Jchromosome CDS405411 633 - 0.301738
fusA bbp470 elongation factor Gchromosome CDS531310 2133 - 0.327239
glnS bbp375 glutaminyl-tRNA synthetasechromosome CDS429617 1653 + 0.257713
gltX bbp065 glutamyl-tRNA synthetasechromosome CDS73495 1419 + 0.262861
glyQ bbp127 Glycyl-tRNA synthetase alpha chainchromosome CDS140274 903 - 0.269103
glyS bbp126 glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS)chromosome CDS138135 2094 - 0.242598
gshB bbp490 glutathione synthetasechromosome CDS552392 975 + 0.267692
hemK bbp162 HemKchromosome CDS182787 834 + 0.260192
hisS bbp267 histidyl-tRNA synthetasechromosome CDS307258 1278 + 0.262911
ileS bbp139 isoleucyl-tRNA synthetasechromosome CDS153486 2820 - 0.269858
infA bbp292 translation initiation factor IF-1chromosome CDS342241 219 + 0.315068
infB bbp340 translation initiation factor IF-2chromosome CDS396760 2631 - 0.265678
infC bbp120 translation initiation factor IF-3chromosome CDS132598 546 + 0.28022
ksgA bbp131 dimethyladenosine transferasechromosome CDS144271 783 + 0.247765
leuS bbp395 leucyl-tRNA synthetasechromosome CDS456713 2586 + 0.265275
lysS bbp389 lysyl-tRNA synthetasechromosome CDS448844 1503 - 0.25682
map bbp212 methionine aminopeptidasechromosome CDS248425 801 - 0.278402
metG bbp103 methionyl-tRNA synthetasechromosome CDS113619 1638 + 0.26801
miaA bbp514 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS574629 972 - 0.25823
pheS bbp123 phenylalanyl-tRNA synthetase alpha chainchromosome CDS133982 987 + 0.257345
pnp bbp336 polyribonucleotide nucleotidyltransferasechromosome CDS392685 2082 - 0.315562
prfA bbp161 peptide chain release factor 1chromosome CDS181702 1089 + 0.295684
prfB bbp390 peptide chain release factor 2chromosome CDS450407 1014 - 0.280079
prfC bbp485 peptide chain release factor 3chromosome CDS544861 1599 - 0.267042
proS bbp221 prolyl-tRNA synthetasechromosome CDS259265 1725 - 0.251594
pth bbp179 peptidyl-tRNA hydrolasechromosome CDS202401 624 + 0.25641
rbfA bbp339 ribosome-binding factor Achromosome CDS396349 375 - 0.221333
rimM bbp358 16S rRNA processing protein rimMchromosome CDS415221 543 + 0.257827
rluC bbp318 ribosomal large subunit pseudouridine synthase Dchromosome CDS370167 948 + 0.240506
rluD bbp363 ribosomal large subunit pseudouridine synthase Dchromosome CDS419471 954 - 0.27044
rne bbp317 ribonuclease Gchromosome CDS368538 1233 - 0.282238
rnpA bbp014 ribonuclease P protein componentchromosome CDS15067 345 + 0.26087
rplA bbp038 50S ribosomal protein L1chromosome CDS47970 702 - 0.264957
rplB bbp464 50S ribosomal protein L2chromosome CDS526788 822 - 0.339416
rplC bbp467 50S ribosomal protein L3chromosome CDS528574 645 - 0.300775
rplD bbp466 50S ribosomal protein L4chromosome CDS527964 609 - 0.302135
rplE bbp455 50S ribosomal protein L5chromosome CDS523115 540 - 0.268519
rplF bbp452 50S ribosomal protein L6chromosome CDS521802 540 - 0.309259
rplI bbp508 50S ribosomal protein L9chromosome CDS568911 465 - 0.234409
rplJ bbp037 50S ribosomal protein L10chromosome CDS47182 507 - 0.295858
rplK bbp039 50S ribosomal protein L11chromosome CDS48668 441 - 0.29932
rplL bbp036 50S ribosomal protein L7/L12chromosome CDS46740 369 - 0.300813
rplM bbp354 50S ribosomal protein L13chromosome CDS411351 435 - 0.298851
rplN bbp457 50S ribosomal protein L14chromosome CDS523997 369 - 0.338753
rplO bbp448 50S ribosomal protein L15chromosome CDS520282 444 - 0.259009
rplP bbp460 50S ribosomal protein L16chromosome CDS524968 411 - 0.326034
rplQ bbp441 50S ribosomal protein L17chromosome CDS515758 390 - 0.3
rplR bbp451 50S ribosomal protein L18chromosome CDS521435 366 - 0.319672
rplS bbp360 50S ribosomal protein L19chromosome CDS416573 357 + 0.252101
rplT bbp122 50S ribosomal protein L20chromosome CDS133429 381 + 0.330709
rplU bbp350 50S ribosomal protein L21chromosome CDS408888 339 + 0.227139
rplV bbp462 50S ribosomal protein L22chromosome CDS526104 360 - 0.291667
rplW bbp465 50S ribosomal protein L23chromosome CDS527650 303 - 0.270627
rplX bbp456 ribosomal protein L24chromosome CDS523670 315 - 0.244444
rplY bbp129 50S ribosomal protein L25chromosome CDS142440 294 + 0.221088
rpmA bbp351 50S ribosomal protein L27chromosome CDS409216 258 + 0.341085
rpmB bbp080 50S ribosomal protein L28chromosome CDS86349 225 - 0.275556
rpmC bbp459 50S ribosomal protein L29chromosome CDS524771 198 - 0.287879
rpmD bbp449 50S ribosomal protein L30chromosome CDS520736 177 - 0.293785
rpmE bbp522 50S ribosomal protein L31chromosome CDS585580 210 - 0.271429
rpmF bbp319 50S ribosomal protein L32chromosome CDS371349 165 + 0.315152
rpmG bbp079 50S ribosomal protein L33chromosome CDS86140 168 - 0.22619
rpmH bbp013 50S ribosomal protein L34chromosome CDS14903 144 + 0.340278
rpmI bbp121 50S ribosomal protein L35chromosome CDS133189 198 + 0.272727
rpmJ bbp446 50S ribosomal protein L36chromosome CDS518799 117 - 0.299145
rpsA bbp286 30S ribosomal protein S1chromosome CDS334005 1731 - 0.292317
rpsB bbp213 ribosomal protein S2chromosome CDS249579 687 + 0.279476
rpsC bbp461 30S ribosomal protein S3chromosome CDS525391 708 - 0.336158
rpsD bbp443 ribosomal protein S4chromosome CDS517223 621 - 0.304348
rpsE bbp450 30S ribosomal protein S5chromosome CDS520909 558 - 0.336918
rpsF bbp510 30S ribosomal protein S6chromosome CDS569763 360 - 0.269444
rpsG bbp471 30S ribosomal protein S7chromosome CDS533541 471 - 0.358811
rpsH bbp453 30S ribosomal protein S8chromosome CDS522356 393 - 0.26972
rpsI bbp353 ribosomal protein S9chromosome CDS410946 393 - 0.3257
rpsJ bbp468 30S ribosomal protein S10chromosome CDS529254 315 - 0.349206
rpsK bbp444 30S ribosomal protein S11chromosome CDS517892 390 - 0.328205
rpsL bbp472 30S ribosomal protein S12chromosome CDS534079 372 - 0.344086
rpsM bbp445 30S ribosomal protein S13chromosome CDS518300 357 - 0.322129
rpsN bbp454 30S ribosomal protein S14chromosome CDS522785 306 - 0.349673
rpsO bbp337 30S ribosomal protein S15chromosome CDS395007 270 - 0.233333
rpsP bbp357 30S ribosomal protein S16chromosome CDS414937 264 + 0.253788
rpsQ bbp458 30S ribosomal protein S17chromosome CDS524521 258 - 0.271318
rpsR bbp509 30S ribosomal protein S18chromosome CDS569416 228 - 0.311404
rpsS bbp463 S19 ribosomal proteinchromosome CDS526490 279 - 0.326165
rpsT bbp140 30S ribosomal protein S20chromosome CDS156975 261 + 0.249042
rpsU bbp054 30S ribosomal protein S21chromosome CDS62223 216 - 0.328704
rsmC bbp305 ribosomal RNA small subunit methyltransferase Cchromosome CDS357059 981 + 0.231397
serS bbp290 seryl-tRNA synthetasechromosome CDS339256 1299 - 0.277136
thrS bbp119 threonyl-tRNA synthetasechromosome CDS130663 1932 + 0.287267
trmD bbp359 tRNA (Guanine-N1)-methyltransferasechromosome CDS415789 753 + 0.26826
trmU bbp242 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS279218 1113 + 0.262354
trpS bbp478 tryptophanyl-tRNA synthetasechromosome CDS538176 1002 - 0.276447
truA bbp185 tRNA pseudouridine synthase A (Pseudouridylate synthase I) (Pseudouridine synthase I) (Uracil hydrolyase) (PSU-I)chromosome CDS210481 795 + 0.300629
truB bbp338 tRNA pseudouridine synthase Bchromosome CDS395408 909 - 0.272827
tsf bbp214 elongation factor Tschromosome CDS250352 801 + 0.277154
tuf bbp469 elongation factor Tuchromosome CDS530062 1185 - 0.360338
tyrS bbp115 tyrosyl-tRNA synthetasechromosome CDS125590 1275 + 0.273725
valS bbp331 valyl-tRNA synthetasechromosome CDS382967 2871 - 0.265064
ychF bbp180 hypothetical proteinchromosome CDS203069 1092 + 0.260989
yciL bbp262 ribosomal large subunit pseudouridine synthase Bchromosome CDS300608 744 + 0.262097
yfhC bbp236 putative deaminasechromosome CDS273380 489 + 0.247444
yhaR bbp334 translational inhibitor proteinchromosome CDS389813 381 + 0.251969
yjeA bbp528 putative lysyl-tRNA synthetasechromosome CDS592490 969 - 0.266254
yleA bbp392 hypothetical proteinchromosome CDS452828 1338 + 0.27429
yrdC bbp438 conserved hypothetical proteinchromosome CDS512306 561 - 0.28877