Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Chromobacterium violaceum ATCC 12472, ATCC 12472
Number of genes found: 194
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| Chromobacterium violaceum ATCC 12472, ATCC 12472 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CV2142 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2325895 | 309 | - | 0.621359 |
| NA | CV1820 | probable ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 1975805 | 2946 | + | 0.679905 |
| NA | CV2089 | probable ATP-dependent RNA helicase | SubName: Full=Probable ATP-dependent RNA helicase; | chromosome | CDS | 2275515 | 1689 | + | 0.67614 |
| NA | CV4226 | probable sugar-phosphate nucleotidyl transferase | SubName: Full=Probable sugar-phosphate nucleotidyl transferase; EC=2.7.7.13; EC=2.7.7.24; | chromosome | CDS | 4559967 | 699 | - | 0.719599 |
| NA | CV0928 | probable translational inhibitor protein | SubName: Full=Probable translational inhibitor protein; | chromosome | CDS | 962304 | 381 | + | 0.635171 |
| NA | CV2752 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2988019 | 408 | - | 0.678922 |
| NA | CV0888 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 916210 | 240 | + | 0.6375 |
| NA | CV2171 | probable adenine-specific methylase | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 2344200 | 903 | - | 0.651163 |
| NA | CV2329 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 2519757 | 948 | + | 0.647679 |
| NA | CV2875 | probable acetyltransferase protein | SubName: Full=Probable acetyltransferase protein; | chromosome | CDS | 3150147 | 564 | + | 0.663121 |
| NA | CV3711 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 4013940 | 357 | - | 0.703081 |
| NA | CV3103 | probable Bifuncional: UDP-N-acetylglucosamineglucose-1-phosphate thymidylyltransferase; Glucosamine-1-phosphate | SubName: Full=Probable Bifuncional: UDP-N-acetylglucosamineglucose-1-phosphate thymidylyltransferase; Glucosamine-1-phosphate; EC=2.7.7.23; EC=2.7.7.24; | chromosome | CDS | 3391237 | 615 | - | 0.678049 |
| NA | CV4055 | conserved hypothetical protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 4386013 | 1092 | - | 0.644689 |
| NA | CV3618 | probable sun homolog protein | SubName: Full=Probable sun-like protein; | chromosome | CDS | 3922948 | 1260 | + | 0.669048 |
| NA | CV3163 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3446705 | 621 | - | 0.671498 |
| NA | CV2030 | probable tRNA methyltransferase | SubName: Full=Probable tRNA methyltransferase; EC=2.1.1.33; | chromosome | CDS | 2212099 | 801 | + | 0.695381 |
| NA | CV3799 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 4096789 | 483 | + | 0.596273 |
| NA | CV4383 | probable RNA methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 4727054 | 465 | + | 0.6 |
| NA | CV3471 | probable cytidine deaminase | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 3765060 | 735 | + | 0.730612 |
| NA | CV3645 | probable RNA methyltransferase | SubName: Full=Probable RNA methyltransferase; EC=2.1.1.-; | chromosome | CDS | 3942523 | 735 | + | 0.669388 |
| NA | CV2406 | probable pseudouridylate synthase | SubName: Full=Probable pseudouridylate synthase; EC=4.2.1.70; | chromosome | CDS | 2590708 | 729 | + | 0.640604 |
| NA | CV1157 | probable pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1215905 | 675 | + | 0.699259 |
| NA | CV3333 | probable sigma-54 modulation protein | SubName: Full=Probable sigma-54 modulation protein; | chromosome | CDS | 3631574 | 333 | + | 0.591592 |
| NA | CV2338 | probable ribosomal-protein-alanine N-acetyltransferase | SubName: Full=Probable ribosomal-protein-alanine N-acetyltransferase; EC=2.3.1.128; | chromosome | CDS | 2526728 | 537 | - | 0.621974 |
| NA | CV1149 | probable RNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 1208347 | 747 | + | 0.678715 |
| NA | CV4262 | probable sun protein homolog | SubName: Full=Probable sun-like protein; | chromosome | CDS | 4596218 | 1251 | - | 0.693046 |
| NA | CV1932 | probable RNA methyltransferase | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 2101407 | 1545 | - | 0.64466 |
| NA | CV4149 | conserved hypothetical protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 4489369 | 1335 | + | 0.645693 |
| NA | CV3058 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3338449 | 537 | - | 0.709497 |
| NA | CV4301 | probable hemolysin | SubName: Full=Probable hemolysin; | chromosome | CDS | 4641363 | 747 | - | 0.696118 |
| NA | CV2346 | probable pseudouridylate synthases | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2530831 | 750 | - | 0.654667 |
| NA | CV1289 | probable ribosomal-protein-serine acetyltransferase | SubName: Full=Probable ribosomal-protein-serine acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 1355872 | 528 | + | 0.672348 |
| NA | CV1288 | probable ribosomal-protein-serine acetyltransferase | SubName: Full=Probable ribosomal-protein-serine acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 1355309 | 561 | + | 0.682709 |
| NA | CV3393 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3687554 | 348 | - | 0.66954 |
| NA | CV4043 | probable ribosomal-protein-alanine N-acetyltransferase | SubName: Full=Probable ribosomal-protein-alanine N-acetyltransferase; EC=2.3.1.128; | chromosome | CDS | 4375682 | 558 | + | 0.682796 |
| NA | CV3386 | conserved hypothetical protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3679923 | 1440 | - | 0.672222 |
| NA | CV3663 | probable pseudouridine synthase | SubName: Full=Probable pseudouridine synthase; EC=4.2.1.70; | chromosome | CDS | 3964138 | 747 | - | 0.654619 |
| NA | CV0275 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 284669 | 507 | + | 0.583826 |
| NA | CV4094 | probable ribosomal-protein-serine acetyltransferase | SubName: Full=Probable ribosomal-protein-serine acetyltransferase; | chromosome | CDS | 4430757 | 717 | - | 0.642957 |
| NA | CV2317 | probable ribosomal-protein-alanine acetyltransferase | SubName: Full=Probable ribosomal-protein-alanine acetyltransferase; EC=2.3.1.128; | chromosome | CDS | 2509160 | 549 | - | 0.460838 |
| NA | CV0748 | probable transformylase | SubName: Full=Probable transformylase; EC=2.1.2.9; | chromosome | CDS | 768301 | 918 | - | 0.708061 |
| NA | CV1740 | probable acetyltransferases | SubName: Full=Probable acetyltransferases; EC=2.3.1.-; | chromosome | CDS | 1890304 | 711 | + | 0.659634 |
| NA | CV2918 | probable ribosomal protein N-acetyltransferase | SubName: Full=Probable ribosomal protein N-acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 3199233 | 567 | + | 0.679012 |
| NA | CV1373 | probable oxidoreductase | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 1445751 | 1317 | + | 0.649962 |
| NA | CV3666 | probable Acetyltransferase | SubName: Full=Probable Acetyltransferase; | chromosome | CDS | 3968440 | 567 | + | 0.68254 |
| NA | CV2425 | conserved hypothetical protein | RecName: Full=Probable RNA 2-phosphotransferase; EC=2.7.1.-; | chromosome | CDS | 2608599 | 630 | + | 0.646032 |
| NA | CV3077 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3353837 | 354 | - | 0.618644 |
| NA | CV0314 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 332104 | 498 | + | 0.708835 |
| NA | CV1694 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1832489 | 624 | + | 0.669872 |
| NA | CV2787 | probable ribosome-associated heat shock protein Hsp15 | SubName: Full=Probable ribosome-associated heat shock protein Hsp15; | chromosome | CDS | 3021497 | 405 | - | 0.681481 |
| NA | CV1476 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1574725 | 666 | + | 0.575075 |
| NA | CV1182 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1244205 | 1272 | + | 0.583333 |
| NA | CV4333 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 4674096 | 507 | + | 0.666667 |
| NA | CV1251 | conserved hypothetical protein | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 1316511 | 453 | + | 0.675497 |
| NA | CV3218 | probable translation initiation protein, Sua5/YciO/YrdC family | SubName: Full=Probable translation initiation protein, Sua5/YciO/YrdC family; | chromosome | CDS | 3498679 | 966 | - | 0.727743 |
| NA | CV4307 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 4649798 | 768 | - | 0.751302 |
| NA | CV0550 | probable Sua5/YciO/YrdC family protein | RecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; | chromosome | CDS | 588110 | 582 | + | 0.689003 |
| NA | CV3433 | probable glutamyl-tRNA synthetase-related protein | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 3730152 | 897 | - | 0.704571 |
| NA | CV0924 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 958236 | 1044 | + | 0.646552 |
| NifR3 | CV0544 | Regulatory gene required to sense and relay the nitrogen status | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 582495 | 1059 | + | 0.664778 |
| alaS | CV1604 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 1730157 | 2634 | - | 0.671982 |
| ansA | CV1687 | L-asparaginase I | SubName: Full=L-asparaginase I; EC=3.5.1.1; | chromosome | CDS | 1828489 | 996 | + | 0.697791 |
| argS | CV1962 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 2133825 | 1719 | + | 0.638743 |
| aspS | CV3740 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 4038696 | 1794 | - | 0.638796 |
| cafA | CV0125 | ribonuclease G | SubName: Full=Ribonuclease G; EC=3.1.4.-; | chromosome | CDS | 136535 | 1497 | + | 0.654643 |
| cca | CV2032 | tRNA adenylyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 2214113 | 1224 | - | 0.691176 |
| cysS | CV1746 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 1897277 | 1380 | + | 0.657246 |
| dbpA | CV2853 | ATP-dependent RNA helicase dbpA | SubName: Full=ATP-dependent RNA helicase dbpA; | chromosome | CDS | 3109783 | 1383 | + | 0.671005 |
| ddhA | CV3893 | glucose-1-phosphate cytidylyltransferase | SubName: Full=Glucose-1-phosphate cytidylyltransferase; EC=2.7.7.33; | chromosome | CDS | 4202006 | 771 | - | 0.622568 |
| def | CV4265 | Polypeptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 4599430 | 504 | - | 0.613095 |
| efp | CV1378 | elongation factor EF-P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 1454130 | 564 | - | 0.585106 |
| fmt | CV4264 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4598432 | 924 | - | 0.714286 |
| fmt2 | CV2818 | methionyl-tRNA formyltransferase | SubName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 3068462 | 861 | - | 0.665505 |
| frr | CV2199 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 2369992 | 558 | + | 0.589606 |
| ftsJ | CV3798 | cell division protein FtsJ | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 4096178 | 618 | - | 0.600324 |
| fusA | CV4189 | elongation factor | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 4516809 | 2097 | - | 0.597997 |
| gatA | CV4355 | Glu-tRNA(Gln) amidotransferase, subunit A | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 4695626 | 1452 | - | 0.670799 |
| gatB | CV4354 | Glu-tRNA(Gln) amidotransferase, subunit B | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 4694038 | 1428 | - | 0.641457 |
| gatC | CV4356 | Glu-tRNA(Gln) amidotransferase subunit C | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 4697160 | 288 | - | 0.621528 |
| glnS | CV1742 | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 1891711 | 1683 | + | 0.641711 |
| gltX | CV1937 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 2107938 | 1386 | + | 0.663059 |
| glyQ | CV1654 | glycyl-tRNA synthetase, alpha chain | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; | chromosome | CDS | 1792432 | 921 | + | 0.635179 |
| glyS | CV1656 | glycyl-tRNA synthetase, beta chain | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; | chromosome | CDS | 1793855 | 2061 | + | 0.691897 |
| gshB | CV4275 | glutathione synthetase protein | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 4608528 | 945 | - | 0.674074 |
| hemK | CV3584 | HemK protein | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 3892043 | 765 | - | 0.717647 |
| hisS | CV3537 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 3845151 | 1272 | - | 0.659591 |
| hoxX | CV4142 | hoxX-like protein | SubName: Full=HoxX-like protein; | chromosome | CDS | 4481738 | 1698 | - | 0.702002 |
| ileS | CV3569 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 3875033 | 2778 | - | 0.655148 |
| infA1 | CV1898 | translation initiation factor | RecName: Full=Translation initiation factor IF-1 1; | chromosome | CDS | 2065091 | 267 | - | 0.629214 |
| infA2 | CV4165 | translation initiation factor | RecName: Full=Translation initiation factor IF-1 2; | chromosome | CDS | 4504654 | 195 | - | 0.548718 |
| infB | CV1462 | translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 1550994 | 2895 | + | 0.667703 |
| infC | CV1349 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 1422345 | 462 | + | 0.575758 |
| ksgA | CV0121 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 133592 | 789 | - | 0.661597 |
| leuS | CV0505 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 530163 | 2619 | + | 0.656739 |
| ligT | CV0183 | 2'-5' RNA ligase | SubName: Full=2-5 RNA ligase; EC=6.5.1.3; | chromosome | CDS | 193611 | 525 | + | 0.754286 |
| lysS | CV1060 | lysyl-tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 1106914 | 1509 | - | 0.628893 |
| map1 | CV2397 | methionyl aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 2580217 | 798 | - | 0.611529 |
| map2 | CV2334 | methionyl aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 2523917 | 792 | + | 0.642677 |
| miaA | CV3389 | tRNA isopentenyltransferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 3682719 | 978 | + | 0.696319 |
| omlA | CV1796 | outer membrane lipoprotein OmlA | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 1951862 | 384 | - | 0.664062 |
| pcnB | CV1632 | polynucleotide adenylyltransferase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 1770252 | 1353 | + | 0.685883 |
| pheS | CV1352 | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 1423670 | 987 | + | 0.641337 |
| pnp | CV1466 | polyribonucleotide nucleotidyltransferase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 1555925 | 2169 | + | 0.637621 |
| prfA | CV0080 | peptide chain release factor I | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 93658 | 1077 | + | 0.660167 |
| prfB | CV1061 | peptide chain release factor RF-2 | SubName: Full=Peptide chain release factor RF-2; | chromosome | CDS | 1108512 | 900 | - | 0.646667 |
| prfC | CV2386 | peptide chain release factor RF-3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 2567819 | 1611 | - | 0.628802 |
| prmA | CV0984 | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 1020782 | 897 | - | 0.668896 |
| proS | CV0574 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 613877 | 1707 | + | 0.678383 |
| pth | CV4056 | aminoacyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 4387173 | 582 | - | 0.640893 |
| queA | CV0988 | S-adenosylmethionine:tRNAribosyltransferase-isom erase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 1024391 | 1023 | + | 0.658847 |
| rbfA | CV1463 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 1554059 | 417 | + | 0.640288 |
| rhlE1 | CV2892 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 3168075 | 1320 | + | 0.681061 |
| rhlE2 | CV2841 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 3096390 | 1263 | + | 0.702296 |
| rhlE3 | CV0383 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 396849 | 1419 | + | 0.680056 |
| rhlE4 | CV1003 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 1042241 | 1326 | + | 0.661388 |
| rimJ | CV0166 | ribosomal-protein-alanine N-acetyltransferase | SubName: Full=Ribosomal-protein-alanine N-acetyltransferase; EC=2.3.1.128; | chromosome | CDS | 175455 | 582 | + | 0.695876 |
| rimM | CV3674 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 3974694 | 510 | - | 0.643137 |
| rluA | CV3751 | pseudouridine synthase A | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 4049113 | 678 | - | 0.656342 |
| rluB | CV4146 | pseudouridylate synthase | SubName: Full=Pseudouridylate synthase; EC=4.2.1.70; | chromosome | CDS | 4486795 | 702 | + | 0.696581 |
| rluC | CV1818 | pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1974342 | 939 | - | 0.645367 |
| rluD | CV2192 | pseudouridine synthase D | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2364029 | 1092 | - | 0.669414 |
| rna | CV0956 | RNase | SubName: Full=RNase; EC=3.1.27.6; | chromosome | CDS | 990690 | 735 | + | 0.647619 |
| rnpA | CV4406 | ribonuclease P | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 4750490 | 366 | - | 0.620219 |
| rnsA | CV0960 | RNase I precursor | SubName: Full=RNase I; EC=3.1.27.6; | chromosome | CDS | 992906 | 735 | + | 0.512925 |
| rph | CV3847 | tRNA nucleotidyltransferase | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 4152060 | 717 | - | 0.672245 |
| rplA | CV4196 | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 4529870 | 696 | - | 0.614943 |
| rplB | CV4183 | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 4512645 | 834 | - | 0.625899 |
| rplC | CV4186 | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 4514415 | 645 | - | 0.584496 |
| rplD | CV4185 | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 4513795 | 621 | - | 0.582931 |
| rplE | CV4174 | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 4509003 | 540 | - | 0.564815 |
| rplF | CV4171 | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 4507739 | 534 | - | 0.604869 |
| rplI | CV3637 | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 3937655 | 450 | - | 0.6 |
| rplJ | CV4195 | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 4529035 | 495 | - | 0.591919 |
| rplK | CV4197 | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 4530567 | 432 | - | 0.597222 |
| rplL | CV4194 | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 4528627 | 372 | - | 0.577957 |
| rplM | CV3697 | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 3995927 | 429 | - | 0.592075 |
| rplN | CV4176 | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 4509878 | 369 | - | 0.542005 |
| rplO | CV4167 | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 4506227 | 432 | - | 0.627315 |
| rplP | CV4179 | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 4510909 | 417 | - | 0.573142 |
| rplQ | CV4159 | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 4501591 | 396 | - | 0.603535 |
| rplR | CV4170 | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 4507372 | 354 | - | 0.59322 |
| rplS | CV3672 | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 3973555 | 369 | - | 0.612466 |
| rplT | CV1351 | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 1423171 | 360 | + | 0.577778 |
| rplU | CV0848 | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 880034 | 312 | + | 0.519231 |
| rplV | CV4181 | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 4512021 | 330 | - | 0.548485 |
| rplW | CV4184 | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 4513490 | 309 | - | 0.543689 |
| rplX | CV4175 | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 4509552 | 315 | - | 0.565079 |
| rplY | CV4057 | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; | chromosome | CDS | 4387847 | 288 | - | 0.614583 |
| rpmA | CV0849 | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 880358 | 276 | + | 0.586957 |
| rpmB | CV3456 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 3751893 | 234 | - | 0.57265 |
| rpmC | CV4178 | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 4510721 | 189 | - | 0.539683 |
| rpmD | CV4168 | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 4506662 | 186 | - | 0.521505 |
| rpmE | CV1747 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 1898765 | 216 | + | 0.532407 |
| rpmF | CV3418 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 3711499 | 180 | - | 0.594444 |
| rpmG | CV3455 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 3751703 | 156 | - | 0.525641 |
| rpmH | CV4407 | ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 4750860 | 135 | - | 0.666667 |
| rpmI | CV1350 | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 1422960 | 198 | + | 0.570707 |
| rpsA | CV3046 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 3323008 | 1692 | - | 0.602246 |
| rpsB | CV2196 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 2367434 | 732 | + | 0.590164 |
| rpsC | CV4180 | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 4511309 | 702 | - | 0.586895 |
| rpsD | CV4161 | 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 4503018 | 621 | - | 0.563607 |
| rpsE | CV4169 | 30s ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 4506840 | 519 | - | 0.591522 |
| rpsF | CV3640 | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 3938677 | 375 | - | 0.584 |
| rpsG | CV4190 | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 4518933 | 471 | - | 0.585987 |
| rpsH | CV4172 | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 4508282 | 396 | - | 0.585859 |
| rpsI | CV3696 | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 3995519 | 393 | - | 0.608142 |
| rpsJ | CV4187 | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 4515217 | 312 | - | 0.570513 |
| rpsK | CV4162 | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 4503657 | 396 | - | 0.54798 |
| rpsL | CV4191 | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 4519516 | 372 | - | 0.596774 |
| rpsM | CV4163 | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 4504070 | 363 | - | 0.589532 |
| rpsN | CV4173 | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 4508693 | 306 | - | 0.598039 |
| rpsO | CV1465 | 30s ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 1555485 | 270 | + | 0.607407 |
| rpsP | CV3675 | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 3975238 | 252 | - | 0.599206 |
| rpsQ | CV4177 | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 4510456 | 264 | - | 0.545455 |
| rpsR | CV3638 | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 3938126 | 228 | - | 0.548246 |
| rpsS | CV4182 | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 4512360 | 279 | - | 0.541219 |
| rpsT | CV3747 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 4045505 | 264 | - | 0.609848 |
| rpsU | CV3765 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 4064385 | 213 | - | 0.591549 |
| rsuA | CV0389 | pseudouridine synthase A, small subunit | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 403817 | 705 | + | 0.658156 |
| serS | CV1375 | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 1449771 | 1284 | - | 0.64486 |
| sipD | CV2617 | pathogenicity island 1 effector protein | SubName: Full=Pathogenicity island 1 effector protein; | chromosome | CDS | 2824350 | 1200 | - | 0.65 |
| tgt | CV1347 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 1418833 | 1116 | - | 0.641577 |
| thrS | CV1348 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 1420344 | 1902 | + | 0.627235 |
| trmD | CV3673 | tRNA (guanine-N1-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 3973927 | 687 | - | 0.650655 |
| trmU | CV3402 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 3696513 | 1155 | + | 0.638961 |
| trpS1 | CV1697 | tryptophanyl-tRNA synthetase | SubName: Full=Tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 1834572 | 1197 | + | 0.654971 |
| trpS2 | CV3715 | tryptophanyl-tRNA synthetase | SubName: Full=Tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 4016162 | 1023 | + | 0.653959 |
| truA | CV2764 | pseudouridylate synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 2999847 | 789 | - | 0.667934 |
| truB | CV1464 | tRNA pseudouridine 55 synthase | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 1554472 | 921 | + | 0.661238 |
| tsf | CV2197 | elongation factor EF-Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 2368239 | 867 | + | 0.61707 |
| tufA | CV4188 | translation elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 4515546 | 1191 | - | 0.611251 |
| tufB | CV4200 | translation elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 4532139 | 1191 | - | 0.61461 |
| tyrS | CV3072 | tyrosine-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 3349453 | 1275 | + | 0.638431 |
| valS | CV2669 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 2883290 | 2820 | - | 0.638653 |
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