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2024-05-03 03:27:17

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130

Number of genes found: 163

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LIC12029 tRNA/rRNA methyltransferasechromosome I CDS2446873 663 + 0.354449
NA LIC13014 conserved hypothetical proteinchromosome I CDS3669253 258 - 0.329457
NA LIC10086 RNA methyltransferasechromosome I CDS100706 1248 + 0.328526
NA LIC11613 GTP-binding proteinchromosome I CDS1974564 1098 + 0.387978
NA LIC11719 conserved hypothetical proteinchromosome I CDS2094502 948 - 0.344937
NA LIC20251 lysyl-tRNA synthetase homologchromosome II CDS318488 1017 - 0.352016
NA LIC12570 conserved hypothetical proteinchromosome I CDS3116548 1350 - 0.397778
NA LIC10336 conserved hypothetical proteinchromosome I CDS381235 1314 - 0.385845
NA LIC11085 RNA methyltransferasechromosome I CDS1340307 1365 - 0.323077
NA LIC10182 conserved hypothetical proteinchromosome I CDS209971 573 + 0.347295
NA LIC10020 conserved hypothetical proteinchromosome I CDS23118 609 + 0.323481
NA LIC11141 ribonuclease Dchromosome I CDS1407816 639 + 0.356808
NA LIC11360 putative lipoproteinchromosome I CDS1675783 639 - 0.323944
NA LIC13054 conserved hypothetical proteinchromosome I CDS3728126 219 + 0.310502
NA LIC13084 conserved hypothetical proteinchromosome I CDS3769620 744 - 0.357527
NA LIC12152 glucose-1-phosphate cytidylyltransferasechromosome I CDS2601148 768 - 0.404948
NA LIC12906 putative lipoproteinchromosome I CDS3527534 723 - 0.365145
NA LIC12543 conserved hypothetical proteinchromosome I CDS3081501 1314 - 0.395738
NA LIC10431 peptidyl-tRNA hydrolasechromosome I CDS491408 564 + 0.363475
NA LIC12943 tRNA/rRNA methyltransferasechromosome I CDS3572786 462 - 0.380952
NA LIC11171 conserved hypothetical proteinchromosome I CDS1439445 1269 + 0.37431
NA LIC12201 mannose-1-phosphate guanyltransferasechromosome I CDS2654758 804 - 0.356965
NA LIC10192 conserved hypothetical proteinchromosome I CDS221483 939 + 0.369542
NA LIC12298 conserved hypothetical proteinchromosome I CDS2772455 261 - 0.436782
NA LIC12347 ribosomal protein l11 methyltransferasechromosome I CDS2841280 903 - 0.379845
NA LIC11643 LipL45chromosome I CDS2009405 1173 + 0.387042
NA LIC10646 conserved hypothetical proteinchromosome I CDS790129 1044 - 0.386973
NA LIC12437 conserved hypothetical proteinchromosome I CDS2957365 501 + 0.361277
NA LIC10637 ribosomal protein serine acetyltransferasechromosome I CDS775627 792 + 0.383838
NA LIC13108 sugar-phosphate nucleotidyl transferasechromosome I CDS3802503 729 - 0.349794
NA LIC12481 putative amino-acid acetyltransferasechromosome I CDS3005783 606 + 0.363036
NA LIC12502 putative sigma-54 modulation proteinchromosome I CDS3030430 288 - 0.322917
NA LIC11647 pseudouridylate synthasechromosome I CDS2013175 741 + 0.365722
NA LIC10477 conserved hypothetical proteinchromosome I CDS550946 606 + 0.349835
NA LIC11152 pseudouridylate synthase, 23S RNA-specificchromosome I CDS1421846 879 - 0.30603
NA LIC10007 nifR3-like proteinchromosome I CDS11133 990 + 0.375758
NA LIC11079 conserved hypothetical proteinchromosome I CDS1332138 912 - 0.377193
NA LIC11934 polynucleotide adenyltransferase-like proteinchromosome I CDS2336072 1299 + 0.342571
NA LIC13029 conserved hypothetical proteinchromosome I CDS3691869 954 + 0.33543
NA LIC12994 conserved hypothetical proteinchromosome I CDS3639848 1140 + 0.330702
NA LIC12325 conserved hypothetical proteinchromosome I CDS2808602 555 + 0.365766
NA LIC10444 glucose-1-phosphate thymidylyltransferasechromosome I CDS506975 1047 - 0.39255
NA LIC11950 conserved hypothetical proteinchromosome I CDS2358962 357 - 0.319328
NA LIC10516 hypothetical proteinchromosome I CDS619250 330 - 0.363636
NA LIC10736 conserved hypothetical proteinchromosome I CDS898187 468 - 0.42735
NA LIC11071 conserved hypothetical proteinchromosome I CDS1323561 324 - 0.385802
NA LIC10008 conserved hypothetical proteinchromosome I CDS12129 345 + 0.443478
NA LIC10249 RNA methyltransferasechromosome I CDS283507 1182 + 0.348562
NA LIC12186 methionyl-tRNA(fmet) n-formyltransferasechromosome I CDS2639681 927 - 0.316073
NA LIC12944 30S ribosomal protein S1chromosome I CDS3573252 1155 - 0.366234
alaS LIC10763 alanyl-tRNA synthetasechromosome I CDS926801 2934 + 0.399796
argS LIC12102 arginyl-tRNA synthetasechromosome I CDS2542518 1791 - 0.359017
asnS LIC12025 asparaginyl-tRNA synthetasechromosome I CDS2442147 1308 - 0.390673
aspS LIC12108 aspartyl-tRNA synthetasechromosome I CDS2549569 1806 - 0.383167
cdd LIC13472 cytidine deaminasechromosome I CDS4247499 606 + 0.29703
cysS LIC12028 cysteinyl-tRNA synthetasechromosome I CDS2445368 1416 + 0.365819
dead LIC13230 ATP-dependent RNA helicasechromosome I CDS3965016 1566 + 0.386335
def LIC11511 putative polypeptide deformylase proteinchromosome I CDS1869234 537 - 0.405959
eif LIC11175 translation initiation factorchromosome I CDS1444815 1095 - 0.398174
fmt LIC11552 methionyl-tRNA formyltransferasechromosome I CDS1915944 948 + 0.382911
frr LIC10853 ribosome recycling factorchromosome I CDS1028735 555 + 0.409009
fus LIC12876 elongation factor Gchromosome I CDS3470720 1866 - 0.403537
fusA LIC10272 translation elongation factor Gchromosome I CDS308932 2121 - 0.423385
gatA LIC11461 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome I CDS1802311 1464 + 0.382514
gatB LIC10221 glutamyl-tRNA(Gln) amidotransferase subunit Bchromosome I CDS250120 1461 + 0.403833
gatC LIC11460 glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome I CDS1802024 291 + 0.364261
gltX LIC13345 glutamyl-tRNA synthetasechromosome I CDS4100683 1566 - 0.378033
glyS LIC12350 glycyl-tRNA synthetasechromosome I CDS2844717 1395 + 0.38638
hemK LIC10266 protoporphyrinogen oxidasechromosome I CDS302883 861 - 0.339141
hisS LIC10048 histidyl-tRNA synthetasechromosome I CDS57920 1320 - 0.362879
ileS LIC12400 isoleucyl-tRNA synthetasechromosome I CDS2906306 2745 - 0.390528
infA LIC12851 translation initiation factor IF-1chromosome I CDS3458077 219 - 0.429224
infB LIC12705 translation initiation factor 2 IF-2chromosome I CDS3290073 2676 - 0.446188
infC LIC12463 translation initiation factor proteinchromosome I CDS2979483 540 - 0.385185
ksgA LIC10354 dimethyladenosine transferasechromosome I CDS400333 906 - 0.350993
leuS LIC10517 leucyl-tRNA synthetasechromosome I CDS621063 2592 - 0.392747
ligT LIC10097 2'-5' RNA ligasechromosome I CDS114286 549 - 0.349727
lysS LIC11913 lysyl-tRNA synthetasechromosome I CDS2309760 1488 + 0.383737
map LIC11500 methionine aminopeptidasechromosome I CDS1850713 759 + 0.40975
miaA LIC12246 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome I CDS2709428 894 - 0.395973
nylA LIC12392 6-aminohexanoate-cyclic-dimer hydrolasechromosome I CDS2898330 1503 - 0.432468
pcnB LIC11065 polynucleotide adenyltransferasechromosome I CDS1315186 1353 + 0.365115
pheS LIC13310 phenylalanyl-tRNA synthetase alpha chainchromosome I CDS4057523 1026 - 0.355751
pnpA LIC12701 polyribonucleotide nucleotidyltransferasechromosome I CDS3286398 2097 - 0.395804
prfA LIC10102 peptide chain release factor 1chromosome I CDS121705 1065 - 0.384038
prfB LIC10470 peptide chain release factor 2chromosome I CDS541840 1104 - 0.398551
prfC LIC11280 peptide chain release factor 3chromosome I CDS1579160 1713 + 0.399883
prfH LIC11757 peptide chain release factor 2-like proteinchromosome I CDS2150919 468 - 0.333333
proS LIC10858 prolyl-tRNA synthetasechromosome I CDS1033820 1731 + 0.390526
pth LIC11598 peptidyl tRNA hydrolasechromosome I CDS1957813 573 + 0.356021
queA LIC20159 S-adenosylmethionine--tRNAribosyltransferase-isomerasechromosome II CDS192671 1059 - 0.351275
rbfA LIC12704 ribosomal-binding factor Achromosome I CDS3289710 354 - 0.418079
rhlE LIC10738 ATP-dependent RNA helicasechromosome I CDS899573 1623 + 0.378928
rimL LIC10836 ribosomal-protein-serine-acetyltransferasechromosome I CDS1015159 747 + 0.30656
rimM LIC11557 16S rRNA processing proteinchromosome I CDS1919789 531 + 0.367232
rluC LIC12267 ribosomal large subunit pseudouridine synthase Cchromosome I CDS2737583 1185 - 0.31308
rnD LIC13263 ribonuclease Dchromosome I CDS4001129 1167 + 0.353899
rplA LIC10750 50S ribosomal protein L1chromosome I CDS910287 693 + 0.434343
rplB LIC12870 50S ribosomal protein L2chromosome I CDS3466701 840 - 0.442857
rplC LIC12873 50S ribosomal protein L3chromosome I CDS3468508 621 - 0.452496
rplD LIC12872 50S ribosomal protein L4chromosome I CDS3467855 636 - 0.389937
rplE LIC12861 50S ribosomal protein L5chromosome I CDS3463088 549 - 0.400729
rplF LIC12858 50S ribosomal protein L6chromosome I CDS3461896 540 - 0.381481
rplI LIC12110 50S ribosomal protein L9chromosome I CDS2552753 450 - 0.395556
rplJ LIC10751 50S ribosomal protein L10chromosome I CDS911007 534 + 0.434457
rplK LIC10749 50S ribosomal protein L11chromosome I CDS909852 429 + 0.452214
rplL LIC10752 50s ribosomal protein L7/L12chromosome I CDS911590 384 + 0.458333
rplM LIC10761 50S ribosomal protein L13chromosome I CDS925859 450 + 0.395556
rplN LIC12863 50S ribosomal protein L14chromosome I CDS3463999 336 - 0.440476
rplO LIC12854 50S ribosomal protein L15chromosome I CDS3460266 543 - 0.416206
rplP LIC12866 50S ribosomal protein L16chromosome I CDS3464953 414 - 0.427536
rplQ LIC12845 50S ribosomal protein L17chromosome I CDS3455009 516 - 0.339147
rplR LIC12857 50S ribosomal protein L18chromosome I CDS3461524 369 - 0.420054
rplS LIC11559 50S ribosomal protein L19chromosome I CDS1920964 417 + 0.378897
rplT LIC12461 50S ribosomal protein L20chromosome I CDS2978894 354 - 0.392655
rplU LIC12776 50S ribosomal protein L21chromosome I CDS3381236 315 - 0.393651
rplV LIC12868 50S ribosomal protein L22chromosome I CDS3466079 333 - 0.408408
rplW LIC12871 50S ribosomal protein L23chromosome I CDS3467544 315 - 0.393651
rplX LIC12862 50S ribosomal protein L24chromosome I CDS3463640 360 - 0.347222
rplY LIC10430 50S ribosomal protein L25chromosome I CDS490723 639 + 0.410016
rpmA LIC12774 50S ribosomal protein L27chromosome I CDS3380669 255 - 0.435294
rpmB LIC11760 50S ribosomal protein L28chromosome I CDS2152468 285 - 0.424561
rpmC LIC12865 50S ribosomal protein L29chromosome I CDS3464672 285 - 0.354386
rpmD LIC12855 50S ribosomal protein L30chromosome I CDS3460824 180 - 0.372222
rpmE LIC12637 50S ribosomal protein L31chromosome I CDS3196476 204 + 0.382353
rpmF LIC12444 50S ribosomal protein L32chromosome I CDS2962593 201 - 0.378109
rpmH LIC10154 50S ribosomal protein L34chromosome I CDS184688 162 + 0.425926
rpmI LIC12462 50S ribosomal protein L35chromosome I CDS2979247 204 - 0.372549
rpmJ LIC12850 50S ribosomal protein L36chromosome I CDS3457955 114 - 0.333333
rpsA LIC12447 30S ribosomal protein S1chromosome I CDS2964475 1683 - 0.376708
rpsB LIC10850 30S ribosomal protein S2chromosome I CDS1026500 885 + 0.416949
rpsC LIC12867 30S ribosomal protein S3chromosome I CDS3465389 678 - 0.396755
rpsD LIC12847 30S ribosomal protein S4chromosome I CDS3456526 624 - 0.405449
rpsE LIC12856 30S ribosomal protein S5chromosome I CDS3461016 507 - 0.406312
rpsF LIC12113 30S ribosomal protein S6chromosome I CDS2553980 276 - 0.416667
rpsG LIC10756 30S ribosomal protein S7chromosome I CDS920885 474 + 0.409283
rpsH LIC12859 30S ribosomal protein S8chromosome I CDS3462462 402 - 0.385572
rpsI LIC10762 30S ribosomal protein S9chromosome I CDS926298 420 + 0.404762
rpsJ LIC12874 30S ribosomal protein S10chromosome I CDS3469141 309 - 0.414239
rpsK LIC12848 30S ribosomal protein S11chromosome I CDS3457161 411 - 0.445255
rpsL LIC10755 30S ribosomal protein S12chromosome I CDS920492 375 + 0.445333
rpsM LIC12849 30S ribosomal protein S13chromosome I CDS3457574 378 - 0.402116
rpsN LIC12860 30S ribosomal protein S14chromosome I CDS3462883 186 - 0.44086
rpsO LIC12702 30S ribosomal protein S15chromosome I CDS3288506 267 - 0.325843
rpsP LIC11555 30S ribosomal protein S16chromosome I CDS1919222 345 + 0.365217
rpsQ LIC12864 30S ribosomal protein S17chromosome I CDS3464393 270 - 0.366667
rpsR LIC12111 30S ribosomal protein S18chromosome I CDS2553212 246 - 0.382114
rpsS LIC12869 30S ribosomal protein S19chromosome I CDS3466411 282 - 0.379433
rpsT LIC10448 30S ribosomal protein S20chromosome I CDS511364 267 - 0.378277
rpsU LIC11704 30S ribosomal protein S21chromosome I CDS2071604 210 - 0.361905
serS LIC13480 seryl-tRNA synthetasechromosome I CDS4255880 1254 - 0.363636
tgt LIC11005 tRNA-guanine transglycosylasechromosome I CDS1223051 1125 - 0.395556
thrS LIC12465 threonyl-tRNA synthetasechromosome I CDS2981653 1917 - 0.380803
tlyA LIC10284 hemolysin Achromosome I CDS323499 780 + 0.346154
trmD LIC11558 tRNA (guanine-N1)-methyltransferasechromosome I CDS1920309 696 + 0.403736
trmU LIC12269 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome I CDS2742142 1101 - 0.396004
trpS LIC10357 tryptophanyl-tRNA synthetasechromosome I CDS404374 969 - 0.368421
truB LIC12703 tRNA pseudouridine synthase Bchromosome I CDS3288824 852 - 0.373239
tsf LIC10851 elongation factor Tschromosome I CDS1027396 600 + 0.41
tuf LIC12875 elongation factor Tuchromosome I CDS3469464 1206 - 0.436982
tyrS LIC11698 tyrosyl tRNA synthetasechromosome I CDS2063977 1218 - 0.360427
valS LIC10473 valyl-tRNA synthetasechromosome I CDS545939 2649 - 0.403926
yjfH LIC12832 rRNA methylasechromosome I CDS3436679 825 + 0.353939