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2024-05-03 08:44:54

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Leifsonia xyli subsp. xyli str. CTCB07, CTCB07

Number of genes found: 142

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leifsonia xyli subsp. xyli str. CTCB07, CTCB07
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Lxx05970 rRNA methyltransferasechromosome CDS607367 834 + 0.73741
NA Lxx13580 ribonuclease PHchromosome CDS1409768 756 - 0.702381
NA Lxx16610 conserved hypothetical proteinchromosome CDS1728283 1071 - 0.668534
NA Lxx23710 conserved hypothetical proteinchromosome CDS2435229 1185 - 0.745148
NA Lxx03610 translation initiation inhibitorchromosome CDS364853 471 + 0.685775
NA Lxx15450 polypeptide deformylasechromosome CDS1610085 492 - 0.680894
NA Lxx01660 cytosine/adenosine deaminasechromosome CDS164051 432 + 0.738426
NA Lxx09730 secreted proteinchromosome CDS994844 501 - 0.700599
NA Lxx04275 photopigment and puc expression activatorchromosome CDS431664 438 + 0.609589
NA Lxx00630 protein synthesis inhibitorchromosome CDS63395 405 + 0.676543
NA Lxx09210 conserved hypothetical proteinchromosome CDS938373 231 - 0.683983
NA Lxx10490 ribonucleasechromosome CDS1077802 1197 - 0.72264
NA Lxx15070 conserved hypothetical proteinchromosome CDS1569841 642 + 0.672897
NA Lxx23100 translational inhibitor proteinchromosome CDS2380216 432 - 0.733796
NA Lxx01410 conserved hypothetical proteinchromosome CDS139277 1677 + 0.6935
NA Lxx04440 acetyltransferasechromosome CDS445852 597 - 0.731993
NA Lxx15950 conserved hypothetical proteinchromosome CDS1661611 612 + 0.663399
NA Lxx15990 conserved hypothetical proteinchromosome CDS1664074 1608 - 0.679105
NA Lxx15550 ribosome-associated heat shock proteinchromosome CDS1620067 357 + 0.708683
NA Lxx22677 conserved hypothetical proteinchromosome CDS2339179 267 - 0.625468
NA Lxx05390 sigma-54 modulation proteinchromosome CDS542635 699 + 0.660944
NA Lxx06950 translation factorchromosome CDS697560 699 + 0.725322
NA Lxx20170 30S ribosomal protein S5chromosome CDS2074977 699 - 0.705293
NA Lxx18230 tRNA/rRNA methyltransferase proteinchromosome CDS1885503 1011 - 0.700297
NA Lxx21950 amidasechromosome CDS2264767 1440 + 0.734028
5 Lxx00390 phage-related proteinchromosome CDS41320 333 - 0.63964
5 Lxx02480 phage-related proteinchromosome CDS246275 333 + 0.63964
alaS Lxx10910 alanyl-tRNA synthetasechromosome CDS1112717 2658 + 0.68623
ampM Lxx09980 methionine aminopeptidasechromosome CDS1019313 867 - 0.66782
argS Lxx06800 arginyl-tRNA synthetasechromosome CDS676318 1689 + 0.695678
aspS Lxx01320 aspartyl-tRNA synthetasechromosome CDS126892 1278 - 0.651017
cysS Lxx18240 cysteinyl-tRNA synthetasechromosome CDS1886510 1434 - 0.684798
deaD Lxx22100 ATP-dependent RNA helicasechromosome CDS2280433 1200 - 0.700833
deaD Lxx13450 ATP-dependent RNA helicasechromosome CDS1396913 1770 - 0.692655
def Lxx08610 polypeptide deformylasechromosome CDS871765 567 - 0.68254
efp Lxx11000 translation elongation factor EF-Pchromosome CDS1122670 564 + 0.632979
fmt Lxx11170 methionyl-tRNA formyltransferasechromosome CDS1145464 909 + 0.730473
frr Lxx12470 ribosome recycling factorchromosome CDS1298390 561 + 0.659537
fusA Lxx20400 translation elongation factor EF-Gchromosome CDS2090620 2103 - 0.645269
gatA Lxx14350 glutamyl-tRNA amidotransferase subunit Achromosome CDS1480137 1548 - 0.713824
gatB Lxx14340 glutamyl-tRNA amidotransferase subunit Bchromosome CDS1478638 1500 - 0.707333
gatC Lxx14360 glutamyl-tRNA amidotransferase subunit Cchromosome CDS1481702 297 - 0.680135
gcd14 Lxx08280 SAM-dependent methyltransferasechromosome CDS833280 1020 + 0.708824
gltS Lxx13080 glutamyl-tRNA synthetasechromosome CDS1360817 1476 - 0.679539
glyS Lxx01030 glycyl-tRNA synthetasechromosome CDS99376 1392 - 0.662356
hemK Lxx06940 methyltransferasechromosome CDS695952 879 + 0.745165
hisS Lxx17220 histidyl-tRNA synthetasechromosome CDS1783906 1296 - 0.706019
ileS Lxx07970 isoleucyl-tRNA synthetasechromosome CDS804660 3360 + 0.680655
infA Lxx20110 translation initiation factor IF-1chromosome CDS2070957 222 - 0.585586
infB Lxx07150 translation initiation factor IF-2chromosome CDS715801 2751 + 0.693929
infC Lxx18860 translation initiation factor IF-3chromosome CDS1944934 807 - 0.649318
ksgA Lxx17490 dimethyladenosine transferasechromosome CDS1817349 843 - 0.73191
leuS Lxx12370 leucyl-tRNA synthetasechromosome CDS1288182 2601 + 0.668205
lysS Lxx21400 lysyl-tRNA synthetasechromosome CDS2201985 1515 - 0.667987
map Lxx20120 methionine aminopeptidasechromosome CDS2071317 831 - 0.693141
map Lxx14830 methionine aminopeptidasechromosome CDS1543168 810 + 0.698765
metG Lxx06770 methionyl-tRNA synthetasechromosome CDS672631 1770 + 0.657062
metG Lxx17520 methionyl-tRNA synthetasechromosome CDS1819126 1590 - 0.669811
miaA Lxx15980 tRNA isopentenyltransferasechromosome CDS1663148 792 - 0.72601
nifR3 Lxx08490 transcriptional regulator, NifR3/Smm1 familychromosome CDS857561 1227 + 0.700897
pcnB Lxx25190 tRNA nucleotidyltransferasechromosome CDS2569602 1437 - 0.674322
pheS Lxx05980 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS608282 1041 + 0.706052
pnp Lxx09030 polyribonucleotide nucleotidyltransferasechromosome CDS919180 2286 + 0.681102
prfA Lxx06910 peptide chain release factor 1chromosome CDS693192 1077 + 0.675023
prfB Lxx13520 peptide chain release factor 2chromosome CDS1405294 1119 - 0.661305
proS Lxx12210 prolyl-tRNA synthetasechromosome CDS1269974 1773 + 0.690355
pth Lxx17290 peptidyl-tRNA hydrolasechromosome CDS1796125 582 - 0.695876
rbfA Lxx07160 ribosome-binding factor Achromosome CDS718628 429 + 0.675991
rhlE Lxx09180 ATP-dependent RNA helicasechromosome CDS935641 1476 - 0.687669
rhlE Lxx20780 ATP-dependent RNA helicasechromosome CDS2133858 1596 + 0.739975
rimJ Lxx05920 ribosomal-protein-alanine N-acetyltransferasechromosome CDS601697 663 + 0.710407
rimM Lxx14880 16S rRNA processing proteinchromosome CDS1546658 654 - 0.669725
rlu Lxx15170 ribosomal large subunit pseudouridine synthasechromosome CDS1579489 921 - 0.694897
rng Lxx08020 ribonuclease Gchromosome CDS811262 2544 + 0.695755
rplA Lxx02920 50S ribosomal protein L1chromosome CDS292063 690 + 0.675362
rplB Lxx20300 50S ribosomal protein L2chromosome CDS2081035 840 - 0.680952
rplC Lxx20330 50S ribosomal protein L3chromosome CDS2082868 660 - 0.668182
rplD Lxx20320 50S ribosomal protein L4chromosome CDS2082198 666 - 0.665165
rplE Lxx20210 50S ribosomal protein L5chromosome CDS2077137 588 - 0.639456
rplF Lxx20190 50S ribosomal protein L6chromosome CDS2076079 537 - 0.666667
rplI Lxx25150 50S ribosomal protein L9chromosome CDS2567607 453 - 0.631347
rplJ Lxx03150 50S ribosomal protein L10chromosome CDS314078 519 + 0.624277
rplK Lxx02910 50S ribosomal protein L11chromosome CDS291557 432 + 0.657407
rplL Lxx03160 50S ribosomal protein L7/L12chromosome CDS314619 399 + 0.66416
rplM Lxx20030 50S ribosomal protein L13chromosome CDS2063966 447 - 0.668904
rplN Lxx20230 50S ribosomal protein L14chromosome CDS2078087 369 - 0.628726
rplO Lxx20150 50S ribosomal protein L15chromosome CDS2074163 633 - 0.671406
rplP Lxx20260 50S ribosomal protein L16chromosome CDS2079101 420 - 0.645238
rplQ Lxx20070 50S ribosomal protein L17chromosome CDS2068168 480 - 0.689583
rplR Lxx20180 50S ribosomal protein L18chromosome CDS2075702 375 - 0.717333
rplS Lxx14820 50S ribosomal protein L19chromosome CDS1542063 348 - 0.626437
rplT Lxx18840 50S ribosomal protein L20chromosome CDS1944316 393 - 0.684478
rplU Lxx08040 50S ribosomal protein L21chromosome CDS814361 315 + 0.606349
rplV Lxx20280 50S ribosomal protein L22chromosome CDS2080293 411 - 0.659367
rplW Lxx20310 50S ribosomal protein L23chromosome CDS2081899 300 - 0.616667
rplX Lxx20220 50S ribosomal protein L24chromosome CDS2077724 360 - 0.647222
rplY Lxx17300 50S ribosomal protein L25chromosome CDS1796715 603 - 0.686567
rpmA Lxx08050 50S ribosomal protein L27chromosome CDS814705 258 + 0.682171
rpmB Lxx25000 50S ribosomal protein L28chromosome CDS2552817 237 - 0.611814
rpmC Lxx20250 50S ribosomal protein L29chromosome CDS2078757 345 - 0.672464
rpmD Lxx20160 50S ribosomal protein L30chromosome CDS2074795 183 - 0.595628
rpmE Lxx11800 50S ribosomal protein L31chromosome CDS1215123 252 + 0.607143
rpmF Lxx09790 50S ribosomal protein L32chromosome CDS1000607 204 + 0.671569
rpmG Lxx24990 50S ribosomal protein L33chromosome CDS2552650 168 - 0.607143
rpmH Lxx25280 50S ribosomal protein L34chromosome CDS2583799 138 - 0.652174
rpmI Lxx18850 50S ribosomal protein L35chromosome CDS1944740 195 - 0.646154
rpmJ Lxx20595 50S ribosomal protein L36chromosome CDS2107265 123 - 0.585366
rpmJ Lxx20105 50S ribosomal protein L36chromosome CDS2070763 114 - 0.587719
rpsA Lxx11430 30S ribosomal protein S1chromosome CDS1174526 1443 + 0.645184
rpsB Lxx12440 30S ribosomal protein S2chromosome CDS1295749 897 + 0.662207
rpsC Lxx20270 30S ribosomal protein S3chromosome CDS2079523 771 - 0.680934
rpsD Lxx10880 30S ribosomal protein S4chromosome CDS1111310 624 + 0.68109
rpsF Lxx25180 30S ribosomal protein S6chromosome CDS2568915 387 - 0.645995
rpsG Lxx20410 30S ribosomal protein S7chromosome CDS2092819 471 - 0.673036
rpsH Lxx20200 30S ribosomal protein S8chromosome CDS2076622 399 - 0.634085
rpsI Lxx20020 30S ribosomal protein S9chromosome CDS2063409 507 - 0.688363
rpsJ Lxx20340 30S ribosomal protein S10chromosome CDS2083542 309 - 0.627832
rpsK Lxx20090 30S ribosomal protein S11chromosome CDS2069811 399 - 0.669173
rpsL Lxx20420 30S ribosomal protein S12chromosome CDS2093289 375 - 0.653333
rpsM Lxx20100 30S ribosomal protein S13chromosome CDS2070239 375 - 0.653333
rpsN Lxx24980 30S ribosomal protein S14chromosome CDS2552342 306 - 0.656863
rpsO Lxx08990 30S ribosomal protein S15chromosome CDS915994 270 + 0.633333
rpsP Lxx14900 30S ribosomal protein S16chromosome CDS1547548 462 - 0.662338
rpsQ Lxx20240 30S ribosomal protein S17chromosome CDS2078452 306 - 0.660131
rpsR Lxx25160 30S ribosomal protein S18chromosome CDS2568071 264 - 0.662879
rpsS Lxx20290 30S ribosomal protein S19chromosome CDS2080729 282 - 0.62766
rpsT Lxx14710 30S ribosomal protein S20chromosome CDS1527326 261 + 0.628352
rsuA Lxx05710 RNA pseudouridine synthasechromosome CDS581047 783 + 0.715198
serS Lxx02390 seryl-tRNA synthetasechromosome CDS236138 1266 - 0.688784
spoU Lxx11880 rRNA methyltransferasechromosome CDS1223453 834 + 0.711031
spoU Lxx23340 tRNA/rRNA methyltransferasechromosome CDS2401512 657 - 0.689498
thrS Lxx10690 threonyl-tRNA synthetasechromosome CDS1091326 2088 + 0.671456
tlyA Lxx06170 hemolysinchromosome CDS626861 774 + 0.697674
trmD Lxx14850 tRNA-(guanine-N1)-methyltransferasechromosome CDS1544001 684 - 0.695906
trmU Lxx14390 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1486109 1101 - 0.702089
trpS Lxx04450 tryptophanyl-tRNA synthetasechromosome CDS446445 1014 - 0.667653
truA Lxx20040 tRNA pseudouridine synthase Achromosome CDS2064794 867 - 0.723183
truB Lxx07250 tRNA pseudouridine synthase Bchromosome CDS728021 909 + 0.715071
tsf Lxx12450 translation elongation factor EF-Tschromosome CDS1296688 831 + 0.661853
tufA Lxx20390 translation elongation factor EF-Tuchromosome CDS2089294 1194 - 0.644054
tyrS Lxx06140 tyrosyl-tRNA synthetasechromosome CDS624196 1329 + 0.685478
valS Lxx07930 valyl-tRNA synthetasechromosome CDS799774 2589 - 0.68791