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2024-05-06 16:14:58

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Vibrio vulnificus CMCP6, CMCP6

Number of genes found: 228

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio vulnificus CMCP6, CMCP6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VV12399 Ribosomal protein L35chromosome I CDS2437730 195 + 0.425641
NA VV11646 Glutamyl-and glutaminyl-tRNA synthetasechromosome I CDS1613872 279 - 0.448029
NA VV21461 Valyl-tRNA synthetasechromosome II CDS1595260 483 + 0.494824
NA VV20262 Acetyltransferasechromosome II CDS288065 540 - 0.446296
NA VV10939 ATP-dependent RNA helicase RhlBchromosome I CDS945638 1308 + 0.49159
NA VV11251 Predicted rRNA methylasechromosome I CDS1236702 474 - 0.487342
NA VV12034 Translation elongation factor Tschromosome I CDS2025021 333 + 0.444444
NA VV10598 Ribosomal protein S9chromosome I CDS611802 393 - 0.483461
NA VV10743 Ribosomal protein S5chromosome I CDS757022 504 - 0.464286
NA VV11698 Pseudouridine synthasechromosome I CDS1682553 945 + 0.47619
NA VV12156 Aspartyl-tRNA synthetasechromosome I CDS2160625 1779 + 0.489039
NA VV10266 2-methylthioadenine synthetasechromosome I CDS256562 1425 + 0.472281
NA VV21139 tRNA and rRNA cytosine-C5-methylasechromosome II CDS1233698 1215 - 0.515226
NA VV20290 Ribonucleases G and Echromosome II CDS316093 318 - 0.481132
NA VV10511 Ribosomal protein S20chromosome I CDS510700 261 + 0.45977
NA VV10762 Ribosomal protein L3chromosome I CDS764616 630 - 0.463492
NA VV11858 Methionine aminopeptidasechromosome I CDS1852858 879 - 0.435722
NA VV12796 Superfamily II DNA and RNA helicasechromosome I CDS2855925 393 + 0.450382
NA VV11737 Translation elongation factor Gchromosome I CDS1726595 1086 + 0.466851
NA VV12116 Pseudouridine synthase family 1 proteinchromosome I CDS2117992 705 - 0.46383
NA VV20617 Predicted SpoU class rRNA methylasechromosome II CDS671710 522 + 0.515326
NA VV12398 Translation initiation factor 3chromosome I CDS2437237 390 + 0.45641
NA VV12843 16S rRNA uridine-516 pseudouridylate synthasechromosome I CDS2909825 702 - 0.472934
NA VV10824 Ribosomal protein L28chromosome I CDS832326 237 - 0.468354
NA VV10272 Leucyl-tRNA synthetasechromosome I CDS262850 2574 + 0.487956
NA VV11463 Putative translation initiation inhibitorchromosome I CDS1450760 390 - 0.510256
NA VV10739 Ribosomal protein S13chromosome I CDS754387 357 - 0.467787
NA VV12316 Acetyltransferase family proteinchromosome I CDS2341081 540 + 0.518519
NA VV11387 Ribosomal protein S6chromosome I CDS1372354 372 + 0.47043
NA VV10393 Ribosomal protein L22chromosome I CDS372848 543 + 0.392265
NA VV10735 Ribosomal protein L17chromosome I CDS751905 384 - 0.481771
NA VV20589 Putative translation initiation inhibitor, yjgF familychromosome II CDS643987 363 - 0.476584
NA VV10440 rRNA methylasechromosome I CDS435501 729 - 0.485597
NA VV12524 Acetyltransferasechromosome I CDS2569500 234 + 0.42735
NA VV11855 Pseudouridylate synthasechromosome I CDS1848728 738 + 0.493225
NA VV10769 Predicted exonuclease of the beta-lactamase fold involved in RNA processingchromosome I CDS772430 1341 - 0.474273
NA VV11738 Translation elongation factor Gchromosome I CDS1727661 1023 + 0.467253
NA VV11171 SAM-dependent methyltransferasechromosome I CDS1164442 1110 - 0.472973
NA VV20591 Translation initiation factor 2chromosome II CDS645495 2472 - 0.502427
NA VV12926 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome I CDS2992221 1125 + 0.453333
NA VV10526 Lysyl-tRNA synthetasechromosome I CDS525715 1533 - 0.476843
NA VV11208 Ribosomal protein L1chromosome I CDS1185415 702 + 0.45584
NA VV10751 Ribosomal protein L14chromosome I CDS760093 372 - 0.478495
NA VV10761 Ribosomal protein L4chromosome I CDS763997 603 - 0.456053
NA VV10788 Ribosomal S7-like proteinchromosome I CDS798083 582 + 0.515464
NA VV11860 Translation elongation factor Tschromosome I CDS1854969 843 + 0.460261
NA VV11992 tRNA pseudouridine synthase Achromosome I CDS1988977 795 + 0.498113
NA VV10342 Cytosine/adenosine deaminasechromosome I CDS331087 546 - 0.498168
NA VV20664 Cysteinyl-tRNA synthetasechromosome II CDS721775 372 - 0.419355
NA VV21639 Acetyltransferasechromosome II CDS1789909 558 - 0.453405
NA VV12076 Ribosomal-protein-serine acetyltransferasechromosome I CDS2069256 549 - 0.471767
NA VV11005 RNase P protein componentchromosome I CDS1008171 357 + 0.45098
NA VV10749 Ribosomal protein L5chromosome I CDS759472 264 - 0.458333
NA VV12514 Putative acetyltransferasechromosome I CDS2556948 552 + 0.429348
NA VV10738 Ribosomal protein S11chromosome I CDS753979 390 - 0.505128
NA VV12908 Cysteinyl-tRNA synthetasechromosome I CDS2974971 1311 - 0.4836
NA VV21546 ATP-dependent RNA helicase, DEAD box familychromosome II CDS1693992 1344 + 0.46875
NA VV11337 Ribosomal protein S7chromosome I CDS1321137 471 + 0.460722
NA VV10760 Ribosomal protein L23chromosome I CDS763698 303 - 0.425743
NA VV10987 NADH dehydrogenase subunit II-related proteinchromosome I CDS989547 261 - 0.413793
NA VV11647 Glutamyl-and glutaminyl-tRNA synthetasechromosome I CDS1614192 564 - 0.485816
NA VV20227 Superfamily II DNA and RNA helicasechromosome II CDS256126 1257 + 0.470167
NA VV12850 Ribosomal protein L25chromosome I CDS2915006 279 + 0.476703
NA VV10763 Ribosomal protein S10chromosome I CDS765260 312 - 0.467949
NA VV11980 Adenine-specific methylasechromosome I CDS1973049 879 + 0.482366
NA VV11615 Ribosomal protein S16chromosome I CDS1586431 249 + 0.46988
NA VV11708 Polyribonucleotide nucleotidyltransferasechromosome I CDS1692833 2127 + 0.471556
NA VV21204 Glutathione synthasechromosome II CDS1302337 1041 - 0.479347
NA VV20609 Ribosome recycling factorchromosome II CDS665468 408 - 0.485294
NA VV10884 Predicted D-Tyr-tRNAtyr deacylasechromosome I CDS894045 435 - 0.487356
NA VV10445 Queuine/archaeosine tRNA-ribosyltransferasechromosome I CDS440697 1239 - 0.466505
NA VV20282 Translation initiation factor 1 related proteinchromosome II CDS313333 312 + 0.439103
NA VV11840 Ribosomal protein L31 familychromosome I CDS1837189 261 + 0.471264
NA VV12630 Ribosome modulation factorchromosome I CDS2666583 198 - 0.449495
NA VV11461 Pseudouridylate synthase, 23S RNA-specificchromosome I CDS1448929 753 + 0.508632
NA VV11859 Ribosomal protein S2chromosome I CDS1854125 714 + 0.44958
NA VV11339 GTPase-translation elongation factorchromosome I CDS1323933 1185 + 0.470042
NA VV11204 GTPase-translation elongation factorchromosome I CDS1182753 912 + 0.464912
NA VV20878 Tyrosyl-tRNA synthetasechromosome II CDS954234 1269 + 0.495666
NA VV20942 Translation elongation factorchromosome II CDS1019237 2019 + 0.490342
NA VV10750 Ribosomal protein L24chromosome I CDS759762 318 - 0.430818
NA VV12025 2-methylthioadenine synthetasechromosome I CDS2016647 1122 - 0.40107
NA VV20481 Peptide chain release factor 1chromosome II CDS532604 270 - 0.437037
NA VV10747 Ribosomal protein S14chromosome I CDS758872 306 - 0.45098
NA VV11233 Ribosomal protein L11 methylasechromosome I CDS1212005 888 - 0.505631
NA VV20420 Polyribonucleotide nucleotidyltransferasechromosome II CDS452764 585 - 0.464957
NA VV10534 Superfamily II DNA and RNA helicasechromosome I CDS535282 1227 + 0.502037
NA VV10527 Protein chain release factor Bchromosome I CDS527280 870 - 0.48046
NA VV10741 Ribosomal protein L15chromosome I CDS756397 435 - 0.471264
NA VV10671 Ribosomal protein L21chromosome I CDS692941 312 - 0.435897
NA VV11688 Predicted RNA-binding proteinchromosome I CDS1670914 297 - 0.430976
NA VV11838 Prolyl-tRNA synthetasechromosome I CDS1834566 1716 - 0.495338
NA VV10622 tRNA nucleotidyltransferase/poly(A) polymerasechromosome I CDS639427 1311 + 0.521739
NA VV11338 Translation elongation factorchromosome I CDS1321683 2100 + 0.470476
NA VV13135 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit Dchromosome I CDS3207783 1014 + 0.477318
NA VV10259 Predicted GTPasechromosome I CDS251752 153 + 0.464052
NA VV12845 Hypothetical helicase-related proteinchromosome I CDS2911409 933 + 0.488746
NA VV10167 Putative translation initiation inhibitorchromosome I CDS157601 384 - 0.473958
NA VV11055 Sua5/YciO/YrdC family proteinchromosome I CDS1056999 561 + 0.493761
NA VV12254 Asparaginyl-tRNA synthetasechromosome I CDS2268601 1401 - 0.501784
NA VV10832 RNase PHchromosome I CDS839581 717 - 0.53417
NA VV21334 rRNA methylaseschromosome II CDS1471043 735 + 0.504762
NA VV11819 16S RNA G1207 methylase RsmCchromosome I CDS1814001 1131 - 0.450044
NA VV10629 Ribosomal protein S21chromosome I CDS645452 216 + 0.49537
NA VV10663 Dimethyladenosine transferasechromosome I CDS687333 807 + 0.472119
NA VV11683 Tyrosyl-tRNA synthetasechromosome I CDS1665567 1191 + 0.465155
NA VV13060 Pseudouridine synthase family 1 proteinchromosome I CDS3131216 963 - 0.491173
NA VV11398 tRNA-dihydrouridine synthasechromosome I CDS1382296 948 + 0.474684
NA VV20678 Ribosomal protein S2chromosome II CDS734483 159 - 0.446541
NA VV12956 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNAchromosome I CDS3020409 774 + 0.430233
NA VV13018 Ribonuclease Echromosome I CDS3081073 3102 + 0.476467
NA VV12982 Ribosomal protein S1chromosome I CDS3047439 1671 - 0.452424
NA VV12431 Acetyltransferasechromosome I CDS2474147 234 + 0.42735
NA VV20593 Putative translation initiation inhibitor, yjgF familychromosome II CDS649753 393 - 0.493639
NA VV12482 Acetyltransferasechromosome I CDS2526083 516 + 0.395349
NA VV11862 Ribosome recycling factorchromosome I CDS1856843 315 + 0.450794
NA VV10746 Ribosomal protein S8chromosome I CDS758449 393 - 0.463104
NA VV12946 Seryl-tRNA synthetasechromosome I CDS3008583 1308 - 0.464832
NA VV13016 Ribosomal large subunit pseudouridine synthase Cchromosome I CDS3079459 948 - 0.46308
NA VV11207 Ribosomal protein L11chromosome I CDS1184982 429 + 0.452214
NA VV12496 Acetyltransferasechromosome I CDS2541892 234 + 0.423077
NA VV10260 Predicted GTPasechromosome I CDS251886 828 + 0.487923
NA VV11232 tRNA-dihydrouridine synthasechromosome I CDS1210897 921 - 0.486428
NA VV10737 Ribosomal protein S4chromosome I CDS753331 621 - 0.455717
NA VV10446 S-adenosylmethionine:tRNA-ribosyltransferase-iso merasechromosome I CDS442049 1053 - 0.48623
NA VV13151 D-Tyr-tRNAtyr deacylasechromosome I CDS3224995 3048 - 0.478346
NA VV12271 Ribosomal-protein-alanine acetyltransferasechromosome I CDS2289010 576 + 0.460069
NA VV12123 Translation initiation factor 1chromosome I CDS2124869 219 - 0.447489
NA VV20951 Translation initiation factor 1chromosome II CDS1024664 321 - 0.492212
NA VV12400 Ribosomal protein L20chromosome I CDS2437966 354 + 0.449153
NA VV10792 Ribosomal S7-like proteinchromosome I CDS800080 279 + 0.501792
NA VV10599 Ribosomal protein L13chromosome I CDS612210 429 - 0.440559
NA VV10486 Ribosome-associated protein Ychromosome I CDS483322 324 + 0.401235
NA VV10670 Ribosomal protein L27chromosome I CDS692663 258 - 0.457364
NA VV12475 Acetyltransferasechromosome I CDS2520878 495 + 0.412121
NA VV10744 Ribosomal protein L18chromosome I CDS757540 354 - 0.49435
NA VV11360 Ribosomal protein L31chromosome I CDS1340421 222 + 0.436937
NA VV21254 2-methylthioadenine synthetasechromosome II CDS1373744 1410 + 0.50922
NA VV10246 16S rRNA uridine-516 pseudouridylate synthasechromosome I CDS239243 1044 + 0.478927
NA VV10853 rRNA methylaseschromosome I CDS861378 687 + 0.508006
NA VV20813 Phenylalanyl-tRNA synthetase beta subunitchromosome II CDS871591 498 - 0.447791
NA VV10742 Ribosomal protein L30/L7Echromosome I CDS756838 177 - 0.412429
NA VV10422 Predicted metal-dependent hydrolasechromosome I CDS418172 885 - 0.476836
NA VV20147 Superfamily II DNA and RNA helicasechromosome II CDS161946 1926 + 0.487539
NA VV11696 Translation initiation factor 2chromosome I CDS1679335 2724 + 0.470631
NA VV21175 Translation elongation factorschromosome II CDS1272949 1971 + 0.474378
NA VV10507 Isoleucyl-tRNA synthetasechromosome I CDS504969 2847 - 0.487179
NA VV10693 Ribosome-associated protein Ychromosome I CDS712698 288 + 0.402778
NA VV10753 Ribosomal protein S17chromosome I CDS760627 255 - 0.435294
NA VV11210 Ribosomal protein L7/L12chromosome I CDS1186956 369 + 0.457995
NA VV10261 Predicted GTPasechromosome I CDS252710 132 + 0.401515
NA VV11203 GTPase-translation elongation factorchromosome I CDS1182479 261 + 0.48659
NA VV21318 Pseudouridylate synthase, 23S RNA-specificchromosome II CDS1446375 1698 - 0.535336
NA VV13058 Translation elongation factor Pchromosome I CDS3130275 567 + 0.444444
NA VV11048 N-formylmethionyl-tRNA deformylasechromosome I CDS1051208 513 - 0.463938
NA VV11618 Ribosomal protein L19chromosome I CDS1588062 354 + 0.449153
NA VV13013 Ribosomal protein L32chromosome I CDS3077958 171 - 0.479532
NA VV11782 Glutathione synthasechromosome I CDS1772036 1452 - 0.467631
NA VV20846 Glutathione synthasechromosome II CDS915878 906 + 0.469095
NA VV12370 Phenylalanyl-tRNA synthetase, alpha chainchromosome I CDS2404582 984 + 0.47561
NA VV10368 Small protein Achromosome I CDS353229 360 + 0.422222
NA VV10791 Ribosomal S7-like proteinchromosome I CDS799897 171 + 0.54386
NA VV10879 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunitchromosome I CDS887741 387 + 0.483204
NA VV10745 Ribosomal protein L6P/L9Echromosome I CDS757903 534 - 0.468165
NA VV10757 Ribosomal protein L22chromosome I CDS762214 333 - 0.438438
NA VV11689 23S rRNA methylasechromosome I CDS1671349 630 + 0.433333
NA VV11675 16S RNA G1207 methylase RsmCchromosome I CDS1655307 1023 - 0.472141
NA VV11336 Ribosomal protein S12chromosome I CDS1320645 375 + 0.477333
NA VV10177 Glutamyl-and glutaminyl-tRNA synthetasechromosome I CDS165641 444 - 0.448198
NA VV11645 tRNA nucleotidyltransferase/poly(A) polymerasechromosome I CDS1612425 1368 - 0.487573
NA VV20968 Superfamily II DNA and RNA helicasechromosome II CDS1041516 1197 + 0.477026
NA VV10258 Peptidyl-tRNA hydrolasechromosome I CDS251073 669 + 0.452915
NA VV10748 Ribosomal protein L5chromosome I CDS759195 255 - 0.486275
NA VV11852 Acetyltransferase-related proteinchromosome I CDS1846597 438 + 0.461187
NA VV10759 Ribosomal protein L2chromosome I CDS762857 825 - 0.486061
NA VV11593 Alanyl-tRNA synthetasechromosome I CDS1565592 2583 + 0.485482
NA VV21063 Superfamily II DNA and RNA helicasechromosome II CDS1142219 1239 - 0.494754
NA VV12150 Conserved hypothetical proteinchromosome I CDS2154121 960 - 0.503125
NA VV12229 Conserved hypothetical proteinchromosome I CDS2241229 936 - 0.494658
NA VV11574 SAM-dependent methyltransferasechromosome I CDS1546346 1317 + 0.482156
NA VV12510 Putative acetyltransferasechromosome I CDS2552124 477 + 0.379455
NA VV12506 Putative acetyltransferasechromosome I CDS2547653 516 + 0.395349
NA VV10990 Glycyl-tRNA synthetase, beta subunitchromosome I CDS991933 2082 + 0.491835
NA VV10176 Glutamyl-and glutaminyl-tRNA synthetasechromosome I CDS164412 1185 - 0.460759
NA VV10236 Glutamyl-and glutaminyl-tRNA synthetasechromosome I CDS226538 1425 - 0.477193
NA VV10823 Ribosomal protein L33chromosome I CDS832140 171 - 0.403509
NA VV11701 Ribosomal protein S15P/S13Echromosome I CDS1685092 270 + 0.481481
NA VV11721 Peptide chain release factor RF-3chromosome I CDS1707932 1590 + 0.486792
NA VV11474 Valyl-tRNA synthetasechromosome I CDS1460696 2856 - 0.491947
NA VV11270 Truncated lysyl-tRNA synthetasechromosome I CDS1255327 972 + 0.498971
NA VV10426 Histidyl-tRNA synthetasechromosome I CDS422727 1239 - 0.480226
NA VV10755 Ribosomal protein L16/L10Echromosome I CDS761072 411 - 0.474453
NA VV11617 tRNA-(guanine-N1)-methyltransferasechromosome I CDS1587271 750 + 0.46
NA VV11004 Ribosomal protein L34chromosome I CDS1008017 141 + 0.496454
NA VV20863 N-formylmethionyl-tRNA deformylasechromosome II CDS936715 507 - 0.485207
NA VV11389 Ribosomal protein S18chromosome I CDS1373053 228 + 0.451754
NA VV12361 Acetyltransferasechromosome I CDS2390752 504 + 0.44246
NA VV10754 Ribosomal protein L29chromosome I CDS760881 192 - 0.447917
NA VV10135 Ribonuclease Dchromosome I CDS120018 1173 - 0.492754
NA VV12397 Threonyl-tRNA synthetasechromosome I CDS2435143 1929 + 0.452048
NA VV10145 Arginyl-tRNA synthetasechromosome I CDS129650 1734 + 0.495963
NA VV11293 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome I CDS1278931 915 + 0.457924
NA VV21394 SAM-dependent methyltransferasechromosome II CDS1535827 1083 + 0.514312
NA VV10756 Ribosomal protein S3chromosome I CDS761494 702 - 0.487179
NA VV20136 Superfamily II DNA and RNA helicasechromosome II CDS141685 1305 - 0.475862
NA VV11453 Ribonucleases G and Echromosome I CDS1436033 1470 + 0.480272
NA VV10484 Pseudouridylate synthase, 23S RNA-specificchromosome I CDS481129 978 - 0.503067
NA VV11697 Ribosome-binding factor Achromosome I CDS1682158 396 + 0.457071
NA VV10409 Putative translation factorchromosome I CDS399758 987 + 0.509625
NA VV11616 RimM proteinchromosome I CDS1586695 549 + 0.440801
NA VV11209 Ribosomal protein L10chromosome I CDS1186407 489 + 0.468303
NA VV10252 Methylase of polypeptide chain release factorchromosome I CDS245142 876 - 0.493151
NA VV11390 Ribosomal protein L9chromosome I CDS1373314 450 + 0.446667
NA VV13062 Putative translation factorchromosome I CDS3133300 621 - 0.468599
NA VV11307 Tryptophanyl-tRNA synthetasechromosome I CDS1294185 1017 + 0.483776
NA VV11046 Sun proteinchromosome I CDS1048865 1281 - 0.504294
NA VV12867 Pseudouridylate synthase, 23S RNA-specificchromosome I CDS2932223 789 - 0.487959
NA VV12490 Putative translation initiation inhibitorchromosome I CDS2534110 375 + 0.370667
NA VV10758 Ribosomal protein S19chromosome I CDS762557 279 - 0.473118
NA VV10989 Glycyl-tRNA synthetase, alpha subunitchromosome I CDS991002 918 + 0.482571
NA VV11047 Methionyl-tRNA formyltransferasechromosome I CDS1050229 948 - 0.516878
NA VV20612 Acetyltransferase,chromosome II CDS667098 507 + 0.483235
NA VV20382 Superfamily II DNA and RNA helicasechromosome II CDS402117 1284 - 0.482087
NA VV10253 Protein chain release factor Achromosome I CDS246022 1092 - 0.49359
NA VV11530 Glutathione synthasechromosome I CDS1502083 954 - 0.459119
NA VV11305 rRNA methylaseschromosome I CDS1292525 744 + 0.52957
NA VV11264 Translation elongation factor Pchromosome I CDS1249306 567 + 0.442681
NA VV20608 Superfamily II DNA and RNA helicasechromosome II CDS663874 1530 + 0.50719