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2024-04-29 08:14:03

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bacteroides thetaiotaomicron VPI-5482, VPI-5482

Number of genes found: 181

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Bacteroides thetaiotaomicron VPI-5482, VPI-5482
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BT3709 elongation factor Pchromosome CDS4820156 567 - 0.433862
NA BT3973 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS5173216 1221 - 0.493039
NA BT3503 glutaminase Achromosome CDS4517599 516 + 0.393411
NA BT2404 L-asparaginase Ichromosome CDS3001938 984 + 0.468496
NA BT4312 seryl-tRNA synthetasechromosome CDS5682813 1275 - 0.466667
NA BT2249 ribosome recycling factor (ribosome releasing factor)chromosome CDS2818588 561 + 0.449198
NA BT2719 50S ribosomal protein L29chromosome CDS3373845 198 - 0.323232
NA BT2721 30S ribosomal protein S3chromosome CDS3374506 732 - 0.394809
NA BT3351 cysteinyl-tRNA synthetasechromosome CDS4322214 1482 - 0.475709
NA BT3105 hypothetical proteinchromosome CDS3949447 1032 - 0.428295
NA BT1474 ribosomal protein S6 modification protein-related proteinchromosome CDS1815575 1467 - 0.448534
NA BT4295 putative chitobiasechromosome CDS5657707 1845 - 0.423306
NA BT3430 ribosomal protein S20chromosome CDS4420476 255 - 0.360784
NA BT4587 conserved hypothetical proteinchromosome CDS6010435 423 - 0.446809
NA BT3729 putative protoporphyrinogen oxidasechromosome CDS4839954 837 + 0.457587
NA BT2713 30S ribosomal protein S8chromosome CDS3371559 396 - 0.371212
NA BT4210 peptide chain release factor 1chromosome CDS5546853 1113 - 0.468104
NA BT3772 ribosomal large subunit pseudouridine synthase Dchromosome CDS4892568 672 + 0.470238
NA BT0780 acetyltransferasechromosome CDS971212 507 - 0.414201
NA BT0642 RNA pseudouridylate synthasechromosome CDS790735 921 - 0.433225
NA BT4588 peptidyl-tRNA hydrolasechromosome CDS6010959 570 - 0.431579
NA BT2296 conserved protein found in conjugate transposonchromosome CDS2870606 603 - 0.484245
NA BT2711 50S ribosomal protein L18chromosome CDS3370606 345 - 0.382609
NA BT2710 30S ribosomal protein S5chromosome CDS3370082 519 - 0.39499
NA BT2757 L-asparaginase II precursorchromosome CDS3418288 1059 + 0.450425
NA BT2730 30S ribosomal protein S7chromosome CDS3380941 477 - 0.389937
NA BT0321 cytidine/deoxycytidylate deaminasechromosome CDS387935 471 - 0.44586
NA BT2704 30S ribosomal protein S13chromosome CDS3366497 381 - 0.377953
NA BT3877 30S ribosomal protein S2 (BS1)chromosome CDS5049972 837 + 0.424134
NA BT2714 chloroplast 30S ribosomal protein S14chromosome CDS3372007 300 - 0.45
NA BT1809 conserved protein, with weak BamHI domainchromosome CDS2267883 5031 + 0.499702
NA BT2712 50S ribosomal protein L6chromosome CDS3370972 570 - 0.394737
NA BT3872 ribosomal large subunit pseudouridine synthase Bchromosome CDS5045139 1491 + 0.498323
NA BT1674 hypothetical proteinchromosome CDS2066690 1044 + 0.441571
NA BT0526 L-asparaginase Ichromosome CDS649703 1041 - 0.432277
NA BT2706 methionine aminopeptidasechromosome CDS3367257 798 - 0.413534
NA BT2720 50S ribosomal protein L16chromosome CDS3374048 435 - 0.42069
NA BT2716 50S ribosomal protein L24chromosome CDS3372873 318 - 0.393082
NA BT0806 isoleucyl-tRNA synthetasechromosome CDS996483 3489 + 0.44282
NA BT2122 lysyl-tRNA synthetasechromosome CDS2671083 1731 + 0.47487
NA BT3165 tRNA/rRNA methyltransferasechromosome CDS4035884 528 + 0.452652
NA BT4562 hypothetical proteinchromosome CDS5983259 567 - 0.428571
NA BT2728 30S ribosomal protein S10chromosome CDS3378378 306 - 0.395425
NA BT0815 conserved hypothetical proteinchromosome CDS1007809 552 - 0.411232
NA BT1975 tRNA nucleotidyltransferasechromosome CDS2484488 1509 - 0.485089
NA BT2234 putative cytosine/adenosine deaminasechromosome CDS2803099 444 - 0.497748
NA BT2475 putative translation initiation inhibitorchromosome CDS3096315 1155 - 0.445887
NA BT0425 50S ribosomal protein L20chromosome CDS512408 351 + 0.393162
NA BT4513 putative rRNA methylasechromosome CDS5929885 801 + 0.520599
NA BT1325 glutaminyl-tRNA synthetasechromosome CDS1650148 1740 + 0.482759
NA BT1587 conserved hypothetical proteinchromosome CDS1948868 753 - 0.370518
NA BT3326 putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domainchromosome CDS4274459 945 - 0.48254
NA BT0155 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS160649 1068 + 0.470037
NA BT2703 30S ribosomal protein S11chromosome CDS3366096 390 - 0.417949
NA BT3995 alanyl-tRNA synthetasechromosome CDS5205400 2619 - 0.488736
NA BT4652 conserved hypothetical proteinchromosome CDS6085860 2619 - 0.463154
NA BT3945 methionyl-tRNA formyltransferasechromosome CDS5120937 969 + 0.4871
NA BT3864 tryptophanyl-tRNA synthetasechromosome CDS5034089 1101 - 0.482289
NA BT3878 elongation factor Ts (EF-Ts)chromosome CDS5050934 993 + 0.434038
NA BT0915 50S ribosomal protein L33chromosome CDS1126596 189 - 0.365079
NA BT1885 putative ATP-dependent RNA helicasechromosome CDS2372322 1125 - 0.409778
NA BT3611 glycyl-tRNA synthetasechromosome CDS4679697 1542 + 0.446174
NA BT2725 50S ribosomal protein L23chromosome CDS3376809 291 - 0.329897
NA BT1633 mannose-1-phosphate guanyltransferasechromosome CDS2019352 744 - 0.466398
NA BT0424 50S ribosomal protein L35chromosome CDS512111 198 + 0.358586
NA BT3888 putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferasechromosome CDS5058844 1056 + 0.514205
NA BT3833 50S ribosomal protein L32 (Ribosomal protein I)chromosome CDS4989390 186 + 0.419355
NA BT0639 conserved hypothetical proteinchromosome CDS787476 627 - 0.350877
NA BT2731 30S ribosomal protein S12chromosome CDS3381561 402 - 0.457711
NA BT2741 sigma-54 modulation proteinchromosome CDS3395754 300 - 0.366667
NA BT3710 50S ribosomal protein L34chromosome CDS4820915 162 + 0.438272
NA BT3213 tRNA pseudouridine synthase Bchromosome CDS4105831 723 + 0.524205
NA BT1729 peptide chain release factor 3 (RF-3)chromosome CDS2127615 1599 - 0.471545
NA BT4589 putative 50S ribosomal protein L25chromosome CDS6011664 591 - 0.424704
NA BT0916 50S ribosomal protein L28chromosome CDS1126806 261 - 0.37931
NA BT2819 hypothetical proteinchromosome CDS3505930 1758 + 0.481229
NA BT3303 ATP-dependent RNA helicasechromosome CDS4240031 1944 - 0.498971
NA BT0422 threonyl-tRNA synthetasechromosome CDS509421 1941 + 0.458011
NA BT2702 30S ribosomal protein S4chromosome CDS3365374 606 - 0.39604
NA BT2727 50S ribosomal protein L3chromosome CDS3377742 618 - 0.425566
NA BT1874 putative outer membrane protein, probably involved in nutrient bindingchromosome CDS2355408 1959 - 0.435426
NA BT2708 50S ribosomal protein L15chromosome CDS3369418 447 - 0.393736
NA BT2153 putative Fe-S oxidoreductaseschromosome CDS2710904 1332 - 0.476727
NA BT3141 hypothetical proteinchromosome CDS4006923 483 + 0.488613
NA BT3943 conserved hypothetical protein, putative translation factorchromosome CDS5118574 564 + 0.473404
NA BT2737 50S ribosomal protein L1chromosome CDS3391810 699 - 0.400572
NA BT2167 elongation factor Gchromosome CDS2725620 2157 - 0.436254
NA BT0638 putative methionine aminopeptidase Achromosome CDS786540 924 - 0.440476
NA BT3073 putative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domainchromosome CDS3897137 993 + 0.48137
NA BT4353 valyl-tRNA synthetasechromosome CDS5734500 2640 + 0.481439
NA BT3712 ribosomal large subunit pseudouridine synthase Dchromosome CDS4822165 1074 + 0.484171
NA BT4345 30S ribosomal protein S1chromosome CDS5727227 1800 + 0.442778
NA BT2438 hypothetical proteinchromosome CDS3052706 627 + 0.45933
NA BT0831 ATP-dependent RNA helicasechromosome CDS1025717 1269 - 0.435776
NA BT0476 D-mannose-1-phosphate guanyltransferasechromosome CDS587378 708 + 0.346045
NA BT3116 GTP-binding proteinchromosome CDS3971214 1104 + 0.5
NA BT3876 30S ribosomal protein S9chromosome CDS5049464 387 + 0.452196
NA BT0999 putative acetyltransferasechromosome CDS1241793 546 + 0.441392
NA BT3404 translation initiation factor IF-2chromosome CDS4383289 3123 + 0.464297
NA BT0232 putative protein involved in transpositionchromosome CDS252590 768 - 0.415365
NA BT0643 RNA methyltransferasechromosome CDS791691 1365 - 0.450549
NA BT1500 Ribonuclease Gchromosome CDS1848611 1575 + 0.466032
NA BT4043 dimethyladenosine transferasechromosome CDS5259406 804 - 0.475124
NA BT2709 50S ribosomal protein L30chromosome CDS3369896 177 - 0.378531
NA BT4128 conserved hypothetical proteinchromosome CDS5412640 615 - 0.478049
NA BT3230 tyrosyl-tRNA synthetasechromosome CDS4119353 1293 + 0.474091
NA BT2729 elongation factor Gchromosome CDS3378768 2118 - 0.415958
NA BT0420 peptide deformylase(PDF)chromosome CDS506656 555 + 0.443243
NA BT2705 translation initiation factor IF-1chromosome CDS3367037 219 - 0.360731
NA BT4314 50S ribosomal protein L21chromosome CDS5684528 318 - 0.386792
NA BT2717 50S ribosomal protein L14chromosome CDS3373211 366 - 0.409836
NA BT2715 50S ribosomal protein L5chromosome CDS3372313 558 - 0.367384
NA BT2723 30S ribosomal protein S19chromosome CDS3375689 270 - 0.37037
NA BT2736 ribosomal protein L10chromosome CDS3391276 519 - 0.410405
NA BT2738 50S ribosomal protein L11chromosome CDS3392524 444 - 0.427928
NA BT0810 hypothetical proteinchromosome CDS1002219 378 + 0.407407
NA BT4313 50S ribosomal protein L27chromosome CDS5684237 270 - 0.396296
NA BT0423 translation initiation factor IF-3chromosome CDS511433 558 + 0.421147
NA BT3879 putative translation initiation factor SUI1chromosome CDS5051985 351 - 0.42735
NA BT1154 ATP-independent RNA helicasechromosome CDS1439688 1335 - 0.453184
NA BT2700 50S ribosomal protein L17chromosome CDS3363875 492 - 0.398374
NA BT4501 ribosomal large subunit pseudouridine synthase Achromosome CDS5916372 1650 - 0.454545
NA BT2527 uridine kinase (uridine monophosphokinase)chromosome CDS3156436 1674 - 0.453405
NA BT0005 30S ribosomal protein S17chromosome CDS3460 537 + 0.39851
NA BT0835 tRNA-guanine transglycosylasechromosome CDS1030316 1131 - 0.45977
NA BT1149 Type II restriction enzyme HpaIIchromosome CDS1433635 1086 - 0.451197
NA BT1840 histidyl-tRNA synthetasechromosome CDS2311032 1365 - 0.459341
NA BT0239 hypothetical proteinchromosome CDS263528 735 + 0.379592
NA BT4203 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5539855 927 - 0.442287
NA BT1360 tRNA/rRNA methyltransferasechromosome CDS1687459 744 - 0.483871
NA BT3873 asparaginyl-tRNA synthetasechromosome CDS5046657 1404 + 0.44943
NA BT0811 putative tRNA/rRNA methyltransferasechromosome CDS1002547 759 - 0.449275
NA BT2839 ribosome-binding factor Achromosome CDS3542119 333 - 0.444444
NA BT1039 hypothetical proteinchromosome CDS1310840 1584 - 0.378157
NA BT3227 putative ribonuclease P protein componentchromosome CDS4117949 330 + 0.484848
NA BT3126 leucyl-tRNA synthetasechromosome CDS3983916 2835 + 0.500176
NA BT0893 tRNA (Guanine-N(1)-methyltransferasechromosome CDS1095596 678 - 0.443953
NA BT2829 arginyl-tRNA synthetasechromosome CDS3527081 1794 - 0.445373
NA BT4776 conserved protein found in conjugate transposonchromosome CDS6257089 450 + 0.52
NA BT3214 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS4106571 1059 + 0.476865
NA BT2162 30S ribosomal protein S18chromosome CDS2721486 273 - 0.399267
NA BT0872 aspartyl-tRNA synthetasechromosome CDS1072422 1764 + 0.459751
NA BT2563 polyribonucleotide nucleotidyltransferasechromosome CDS3199710 2127 - 0.461213
NA BT1692 50S ribosomal protein L31 type Bchromosome CDS2088036 255 + 0.384314
NA BT2718 30S ribosomal protein S17chromosome CDS3373579 270 - 0.351852
NA BT0566 alanyl-tRNA synthetasechromosome CDS702524 477 - 0.39413
NA BT2722 50S ribosomal protein L22chromosome CDS3375243 411 - 0.40146
NA BT2724 50S ribosomal protein L2chromosome CDS3375979 825 - 0.435152
NA BT0913 putative Fe-S oxidoreductasechromosome CDS1124016 1311 - 0.430969
NA BT2489 50S ribosomal protein L19chromosome CDS3113000 354 + 0.409605
NA BT2163 30S ribosomal protein S6chromosome CDS2721761 345 - 0.373913
NA BT1669 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2061225 1020 + 0.467647
NA BT1454 putative peptide chain release factorchromosome CDS1791650 621 - 0.52657
NA BT3265 putative D-tyrosyl-tRNA deacylasechromosome CDS4168394 453 - 0.452539
NA BT1079 acetyltransferasechromosome CDS1366016 540 - 0.459259
NA BT2786 30S ribosomal protein S15chromosome CDS3456177 270 - 0.392593
NA BT2024 conserved hypothetical proteinchromosome CDS2541785 666 - 0.412913
NA BT2726 50S ribosomal protein L4chromosome CDS3377116 627 - 0.393939
NA BT1271 30S ribosomal protein S16chromosome CDS1581041 555 + 0.441441
NA BT3354 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS4327863 1113 + 0.461815
NA BT1336 putative translation initiation inhibitorchromosome CDS1661772 375 - 0.469333
NA BT0929 prolyl-tRNA synthetasechromosome CDS1142831 1494 - 0.436412
NA BT3195 conserved hypothetical proteinchromosome CDS4084644 1368 + 0.52924
NA BT4237 tRNA pseudouridine synthase Achromosome CDS5580472 810 + 0.487654
NA BT0865 putative chitobiasechromosome CDS1061861 1323 - 0.438398
NA BT3024 putative outer membrane protein, probably involved in nutrient bindingchromosome CDS3824416 3066 + 0.430202
NA BT2735 50S ribosomal protein L7/L12chromosome CDS3390854 375 - 0.418667
NA BT2064 hypothetical proteinchromosome CDS2583432 1395 - 0.472401
NA BT0314 ribosomal protein L11 methyltransferasechromosome CDS377857 843 - 0.434164
NA BT4323 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5694197 921 - 0.471227
NA BT2740 elongation factor Tuchromosome CDS3393922 1185 - 0.448945
NA BT2004 RimM protein, required for 16S rRNA processingchromosome CDS2520728 540 - 0.492593
NA BT3875 50S ribosomal protein L13chromosome CDS5048996 462 + 0.400433
NA BT2645 hypothetical proteinchromosome CDS3298565 1083 + 0.55494
NA BT4429 putative pteridine-dependent dioxygenasechromosome CDS5834265 1146 + 0.475567
NA BT2161 50S ribosomal protein L9chromosome CDS2721028 444 - 0.385135
NA BT0997 hypothetical proteinchromosome CDS1236402 2622 - 0.462624
NA BT3552 peptide chain release factor RF-2chromosome CDS4594885 960 + 0.483333
NA BT1351 glucose-1-phosphate cytidylyltransferasechromosome CDS1676081 774 - 0.354005
NA BT2748 glutamyl-tRNA synthetasechromosome CDS3404799 1515 - 0.466007
NA BT4332 conserved hypothetical proteinchromosome CDS5705567 651 - 0.474654