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2024-04-29 18:42:38

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Rhodopseudomonas palustris BisB18, BisB18

Number of genes found: 167

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Rhodopseudomonas palustris BisB18, BisB18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPC_4119 Small GTP-binding protein domainchromosome CDS4579672 2049 - 0.682284
NA RPC_0480 translation initiation factor IF-2chromosome CDS517263 2643 + 0.674234
NA RPC_2538 GCN5-related N-acetyltransferasechromosome CDS2747220 486 - 0.495885
NA RPC_2118 GCN5-related N-acetyltransferasechromosome CDS2317980 594 + 0.651515
NA RPC_2808 Lysine--tRNA ligasechromosome CDS3047616 1053 - 0.682811
NA RPC_0331 Ribosomal RNA adenine methylase transferasechromosome CDS353587 603 + 0.643449
NA RPC_2439 ribosome recycling factorchromosome CDS2639953 564 + 0.634752
NA RPC_2845 tyrosyl-tRNA synthetasechromosome CDS3087822 1257 + 0.631663
NA RPC_2570 valyl-tRNA synthetasechromosome CDS2789421 2859 + 0.660371
NA RPC_0397 ribosomal protein S1chromosome CDS429946 1698 - 0.617197
NA RPC_4218 Nucleotidyl transferasechromosome CDS4692877 783 + 0.60281
NA RPC_0468 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS504521 1422 + 0.668073
NA RPC_0223 16S rRNA processing protein RimMchromosome CDS241139 531 + 0.679849
NA RPC_0512 peptide chain release factor 1chromosome CDS551875 1086 - 0.67035
NA RPC_2452 glutaminyl-tRNA synthetasechromosome CDS2655153 1680 + 0.636905
NA RPC_3704 translation initiation factor IF-1chromosome CDS4127366 282 + 0.638298
NA RPC_0908 CMP/dCMP deaminase, zinc-bindingchromosome CDS1006016 447 + 0.666667
NA RPC_0319 glutathione synthetasechromosome CDS340413 942 - 0.64862
NA RPC_3290 ribosomal L11 methyltransferasechromosome CDS3641914 891 + 0.700337
NA RPC_1145 RNA methyltransferasechromosome CDS1245048 1239 - 0.695722
NA RPC_0511 modification methylase, HemK familychromosome CDS550837 876 - 0.726027
NA RPC_2427 prolyl-tRNA synthetasechromosome CDS2628026 1320 + 0.648485
NA RPC_3450 translation elongation factor Tuchromosome CDS3825004 1191 - 0.628883
NA RPC_4029 conserved hypothetical proteinchromosome CDS4478589 222 + 0.603604
NA RPC_2235 ribosomal protein L33chromosome CDS2439585 168 - 0.535714
NA RPC_4793 protein of unknown function DUF983chromosome CDS5353869 402 + 0.654229
NA RPC_4835 Endoribonuclease L-PSPchromosome CDS5395830 390 - 0.653846
NA RPC_1395 isoleucyl-tRNA synthetasechromosome CDS1521609 3075 - 0.637398
NA RPC_0481 ribosome-binding factor Achromosome CDS520122 414 + 0.630435
NA RPC_3440 ribosomal protein L29chromosome CDS3819975 207 - 0.637681
NA RPC_2851 peptide chain release factor 2chromosome CDS3098371 969 - 0.655315
NA RPC_2809 translation elongation factor Pchromosome CDS3048723 651 + 0.592934
NA RPC_0385 Nucleotidyl transferasechromosome CDS414057 726 + 0.679063
NA RPC_0459 tryptophanyl-tRNA synthetasechromosome CDS496181 1050 + 0.62381
NA RPC_3441 ribosomal protein L16chromosome CDS3820193 414 - 0.65942
NA RPC_0750 putative mRNA 3-end processing factorchromosome CDS827024 1071 + 0.668534
NA RPC_2508 arginyl-tRNA synthetasechromosome CDS2719385 1794 + 0.657191
NA RPC_4943 ribosomal protein S20chromosome CDS5513126 267 + 0.629214
NA RPC_3434 ribosomal protein S8chromosome CDS3817688 399 - 0.60401
NA RPC_3449 ribosomal protein S10chromosome CDS3824601 309 - 0.61165
NA RPC_3444 ribosomal protein S19chromosome CDS3821758 279 - 0.616487
NA RPC_2705 methionyl-tRNA synthetasechromosome CDS2932479 1569 + 0.655194
NA RPC_3446 Ribosomal protein L25/L23chromosome CDS3822896 300 - 0.58
NA RPC_2620 conserved hypothetical proteinchromosome CDS2854311 1326 - 0.646305
NA RPC_3313 Endoribonuclease L-PSPchromosome CDS3671392 468 + 0.685897
NA RPC_4017 Sulfate adenylyltransferase, large subunitchromosome CDS4465134 1920 + 0.671875
NA RPC_3437 ribosomal protein L24chromosome CDS3818995 315 - 0.603175
NA RPC_2833 DEAD/DEAH box helicase-likechromosome CDS3074356 1512 + 0.666005
NA RPC_0222 ribosomal protein S16chromosome CDS240565 333 + 0.66967
NA RPC_2295 ribosomal protein S18chromosome CDS2496202 240 - 0.620833
NA RPC_0482 tRNA pseudouridine synthase Bchromosome CDS520535 1164 + 0.668385
NA RPC_2040 GCN5-related N-acetyltransferasechromosome CDS2222443 525 + 0.634286
NA RPC_1147 hemolysin Achromosome CDS1248025 741 - 0.700405
NA RPC_3471 ribosomal protein L1chromosome CDS3855380 693 - 0.660895
NA RPC_0196 2',5' RNA ligasechromosome CDS214210 537 - 0.659218
NA RPC_0444 phenylalanyl-tRNA synthetase, beta subunitchromosome CDS479069 2412 - 0.674544
NA RPC_1134 Amidasechromosome CDS1233894 1794 + 0.704571
NA RPC_2187 conserved hypothetical proteinchromosome CDS2383329 381 + 0.661417
NA RPC_3448 ribosomal protein L3chromosome CDS3823814 732 - 0.642076
NA RPC_3439 ribosomal protein S17chromosome CDS3819717 249 - 0.586345
NA RPC_3423 ribosomal protein L17chromosome CDS3810124 408 - 0.642157
NA RPC_0923 tRNA/rRNA methyltransferase (SpoU)chromosome CDS1020440 489 - 0.631902
NA RPC_0153 ribosomal protein L21chromosome CDS170699 399 + 0.64411
NA RPC_3445 ribosomal protein L2chromosome CDS3822049 834 - 0.643885
NA RPC_2293 ribosomal protein L9chromosome CDS2494444 597 - 0.649916
NA RPC_2437 translation elongation factor Tschromosome CDS2638181 927 + 0.656958
NA RPC_2517 seryl-tRNA synthetasechromosome CDS2727971 1446 + 0.625864
NA RPC_3426 ribosomal protein S13chromosome CDS3812329 447 - 0.608501
NA RPC_1577 RNA methyltransferase TrmH, group 1chromosome CDS1716464 1233 + 0.681265
NA RPC_3703 DEAD/DEAH box helicase-likechromosome CDS4125896 1446 + 0.660443
NA RPC_0043 conserved hypothetical proteinchromosome CDS50514 699 - 0.692418
NA RPC_3431 ribosomal protein S5chromosome CDS3816136 573 - 0.671902
NA RPC_0284 leucyl-tRNA synthetasechromosome CDS302668 2649 + 0.644394
NA RPC_1688 Amidasechromosome CDS1827640 1350 + 0.686667
NA RPC_0225 ribosomal protein L19chromosome CDS242736 396 + 0.626263
NA RPC_2086 cysteinyl-tRNA synthetasechromosome CDS2283809 1467 + 0.622359
NA RPC_2696 ribosomal protein L13chromosome CDS2924090 492 + 0.621951
NA RPC_3459 ribosomal protein L7/L12chromosome CDS3845005 372 - 0.637097
NA RPC_2296 ribosomal protein S6chromosome CDS2496447 507 - 0.64497
NA RPC_0447 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS482263 1083 - 0.638966
NA RPC_3447 ribosomal protein L4/L1echromosome CDS3823192 621 - 0.621578
NA RPC_1213 Amidasechromosome CDS1327744 1416 - 0.683616
NA RPC_0920 Polynucleotide adenylyltransferase regionchromosome CDS1017926 1254 + 0.716108
NA RPC_3425 ribosomal protein S11chromosome CDS3811809 390 - 0.661538
NA RPC_3451 translation elongation factor Gchromosome CDS3826235 2073 - 0.616015
NA RPC_0796 ribosomal protein L31chromosome CDS881714 228 - 0.583333
NA RPC_4885 glutamyl-tRNA synthetase, class Icchromosome CDS5452636 876 - 0.703196
NA RPC_4797 GCN5-related N-acetyltransferasechromosome CDS5358140 588 + 0.670068
NA RPC_0419 3'-5' exonucleasechromosome CDS450451 615 - 0.637398
NA RPC_3433 ribosomal protein L6chromosome CDS3817141 534 - 0.610487
NA RPC_0025 Fmu (Sun)chromosome CDS31482 1353 - 0.707317
NA RPC_2592 queuine tRNA-ribosyltransferasechromosome CDS2819056 1134 + 0.666667
NA RPC_3432 ribosomal protein L18chromosome CDS3816767 363 - 0.650138
NA RPC_2697 ribosomal protein S9chromosome CDS2924583 486 + 0.666667
NA RPC_0483 ribosomal protein S15chromosome CDS521701 270 + 0.585185
NA RPC_3460 ribosomal protein L10chromosome CDS3845431 579 - 0.630397
NA RPC_0224 tRNA (guanine-N1)-methyltransferasechromosome CDS241867 756 + 0.695767
NA RPC_4348 Glycine--tRNA ligasechromosome CDS4847977 2187 - 0.640146
NA RPC_2944 peptide chain release factor 3chromosome CDS3221098 1620 - 0.650617
NA RPC_0566 conserved hypothetical proteinchromosome CDS617749 1050 - 0.619048
NA RPC_0414 sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS445229 606 - 0.646865
NA RPC_0578 methionine aminopeptidase, type Ichromosome CDS629649 822 - 0.63017
NA RPC_0214 MiaB-like tRNA modifying enzymechromosome CDS232473 1263 - 0.692795
NA RPC_0499 ribosomal protein L32chromosome CDS539296 183 + 0.595628
NA RPC_3429 ribosomal protein L15chromosome CDS3815353 489 - 0.670757
NA RPC_2260 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS2463018 288 + 0.631944
NA RPC_2308 dimethyladenosine transferasechromosome CDS2508127 861 - 0.67712
NA RPC_2334 ribonuclease Dchromosome CDS2536559 1155 - 0.669264
NA RPC_3435 ribosomal protein S14chromosome CDS3818097 306 - 0.614379
NA RPC_0893 histidyl-tRNA synthetasechromosome CDS988691 1560 - 0.628846
NA RPC_3436 ribosomal protein L5chromosome CDS3818445 558 - 0.614695
NA RPC_0987 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1080591 1215 + 0.672428
NA RPC_3452 ribosomal protein S7chromosome CDS3828338 471 - 0.62845
NA RPC_4349 Glycine--tRNA ligasechromosome CDS4850163 957 - 0.658307
NA RPC_0819 ribosomal protein L34chromosome CDS901750 135 - 0.681481
NA RPC_3121 threonyl-tRNA synthetasechromosome CDS3464156 2040 + 0.644608
NA RPC_0325 ribonuclease PHchromosome CDS346103 720 - 0.676389
NA RPC_3256 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS3605113 858 - 0.707459
NA RPC_3666 Amidasechromosome CDS4079046 1401 - 0.708779
NA RPC_2451 glutamyl-tRNA synthetasechromosome CDS2653573 1425 - 0.663158
NA RPC_0907 Pseudouridine synthase, Rsuchromosome CDS1003629 2232 - 0.718638
NA RPC_3430 ribosomal protein L30chromosome CDS3815854 195 - 0.574359
NA RPC_0341 initiation factor 3chromosome CDS361514 399 + 0.58396
NA RPC_1416 Aminoacyl-tRNA hydrolasechromosome CDS1542661 606 + 0.645214
NA RPC_4936 Initiation factor 2B alpha/beta/deltachromosome CDS5506721 1122 - 0.699643
NA RPC_0154 ribosomal protein L27chromosome CDS171160 273 + 0.611722
NA RPC_0546 RNA-binding S4chromosome CDS594272 270 + 0.644444
NA RPC_0448 ribosomal protein L20chromosome CDS483539 360 - 0.644444
NA RPC_2269 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS2469464 1485 + 0.643771
NA RPC_0606 Pseudouridine synthase, RluDchromosome CDS658142 1176 - 0.680272
NA RPC_0545 helicase-likechromosome CDS590709 3510 + 0.681766
NA RPC_3443 ribosomal protein L22chromosome CDS3821361 387 - 0.604651
NA RPC_1571 alanyl-tRNA synthetasechromosome CDS1704258 2673 + 0.662177
NA RPC_3064 Fmu (Sun)chromosome CDS3397359 1302 - 0.697389
NA RPC_3453 ribosomal protein S12chromosome CDS3828824 372 - 0.610215
NA RPC_0730 lysyl-tRNA synthetasechromosome CDS798066 1641 + 0.650823
NA RPC_0905 modification methylase, HemK familychromosome CDS1001500 1104 + 0.653986
NA RPC_3438 ribosomal protein L14chromosome CDS3819309 369 - 0.615176
NA RPC_2672 SmpA/OmlAchromosome CDS2902525 486 - 0.62963
NA RPC_0213 pseudouridine synthasechromosome CDS231543 723 + 0.680498
NA RPC_0876 DEAD/DEAH box helicase-likechromosome CDS965338 1980 + 0.682828
NA RPC_2336 aspartyl-tRNA synthetasechromosome CDS2539529 1773 + 0.63621
NA RPC_0807 tRNA pseudouridine synthase Achromosome CDS890918 738 + 0.678862
NA RPC_1671 Amidasechromosome CDS1803509 1449 + 0.692201
NA RPC_0803 Peptide deformylasechromosome CDS888558 528 + 0.619318
NA RPC_3472 ribosomal protein L11chromosome CDS3856079 429 - 0.601399
NA RPC_2264 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS2464297 1479 + 0.6714
NA RPC_1390 Class I peptide chain release factorchromosome CDS1516526 423 - 0.676123
NA RPC_1603 RNA-binding S4chromosome CDS1737951 618 - 0.614887
NA RPC_4305 Sua5/YciO/YrdC/YwlCchromosome CDS4805778 984 - 0.707317
NA RPC_0484 Polyribonucleotide nucleotidyltransferasechromosome CDS522329 2148 + 0.641527
NA RPC_0155 GCN5-related N-acetyltransferasechromosome CDS171562 600 + 0.65
NA RPC_0449 ribosomal protein L35chromosome CDS483984 201 - 0.562189
NA RPC_3442 ribosomal protein S3chromosome CDS3820639 699 - 0.645207
NA RPC_3641 RNA methyltransferase TrmH, group 3chromosome CDS4049334 828 + 0.688406
NA RPC_1415 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5chromosome CDS1541917 723 + 0.69018
NA RPC_0806 methionyl-tRNA formyltransferasechromosome CDS889822 933 + 0.693462
NA RPC_2436 ribosomal protein S2chromosome CDS2637038 1005 + 0.655721
NA RPC_2591 Queuosine biosynthesis proteinchromosome CDS2817920 1140 + 0.685088
NA RPC_4088 beta-lactamase-likechromosome CDS4541203 1599 - 0.674797
NA RPC_3962 ribosomal protein S21chromosome CDS4415100 366 + 0.622951
NA RPC_3989 ribosomal protein L36chromosome CDS4442947 126 - 0.611111
NA RPC_3403 Pseudouridine synthase, RluDchromosome CDS3786650 1506 - 0.691899
NA RPC_3081 ribosomal RNA methyltransferase RrmJ/FtsJchromosome CDS3419176 717 - 0.665272
NA RPC_0543 ribosomal protein L28chromosome CDS588808 306 - 0.637255
NA RPC_2854 ribonuclease, Rne/Rng familychromosome CDS3104253 3090 + 0.67767
NA RPC_4717 tRNA synthetase, class II (G, H, P and S)chromosome CDS5278054 1167 + 0.685518