TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-19 22:59:09

Gene list

Applied filters:

COG category: Translation, ribosomal structure and biogenesis
Organism: Chlamydophila caviae GPIC

Number of genes found: 111

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Chlamydophila caviae GPIC
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CCA00461 GTP-binding protein, YcfH familyRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS521317 1095 + 0.425571
NA CCA00552 translation elongation factor P, putativeRecName: Full=Elongation factor P 1; Short=EF-P 1; chromosome CDS624768 558 + 0.336918
NA CCA00158 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS167660 327 - 0.351682
NA CCA00820 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS942600 558 - 0.38172
NA CCA00511 Sua5/YciO/YrdC family proteinSubName: Full=Sua5/YciO/YrdC family protein; chromosome CDS582317 858 + 0.385781
NA CCA00215 spoU rRNA methylase family proteinSubName: Full=SpoU rRNA methylase family protein; chromosome CDS230334 798 + 0.390977
NA CCA00989 putative TIM-barrel protein, nifR3 familyRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS1150305 1020 - 0.414706
NA CCA00079 RNA methyltransferase, TrmH familyRecName: Full=Putative tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase; chromosome CDS97516 471 + 0.388535
NA CCA00065 Nol1/Nop2/Sun family proteinSubName: Full=Nol1/Nop2/Sun family protein; chromosome CDS81600 1116 + 0.40681
NA CCA00266 MiaB-like tRNA modifying enzymeSubName: Full=MiaB-like tRNA modifying enzyme; chromosome CDS284277 1266 + 0.405213
NA CCA00922 poly(A) polymerase family proteinSubName: Full=Poly(A) polymerase family protein; chromosome CDS1068014 1233 + 0.402271
NA CCA00154 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS161263 684 - 0.407895
NA CCA00760 cytidine/deoxycytidylate deaminase family proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS867481 474 - 0.400844
NA CCA00883 RNA methyltransferase, TrmA family, putativeRecName: Full=Uncharacterized RNA methyltransferase CCA_00883; EC=2.1.1.-; chromosome CDS1013066 1206 + 0.373134
NA CCA00791 poly(A) polymerase family proteinRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome CDS906507 1287 + 0.369852
NA CCA00526 MiaB-like tRNA modifying enzyme YliGRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS596890 1383 - 0.37744
alaS CCA00876 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS1000094 2628 + 0.39688
argS CCA00172 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS179848 1695 - 0.379351
aspS CCA00077 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome CDS94922 1755 + 0.387464
cafA CCA00810 ribonuclease GSubName: Full=Ribonuclease G; chromosome CDS932779 1533 + 0.370515
cysS CCA00838 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS961625 1431 + 0.381551
def CCA00311 polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS360830 561 + 0.404635
efp-1 CCA00873 translation elongation factor PRecName: Full=Elongation factor P 2; Short=EF-P 2; chromosome CDS996192 573 - 0.382199
fmt CCA00091 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS105677 966 + 0.423395
frr CCA00043 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS54691 543 - 0.377532
fusA CCA00192 translation elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS205142 2085 + 0.410072
gatB CCA00289 glutamyl-tRNA(Gln) amidotransferase, B subunitRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS336230 1464 + 0.405055
gatC CCA00287 glutamyl-tRNA(Gln) amidotransferase, C subunitRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; chromosome CDS334432 303 + 0.425743
gltX CCA00182 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS195577 1518 + 0.422925
glyQS CCA00823 glycyl-tRNA synthetase, tetrameric type, alpha/beta subunitsSubName: Full=Glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits; chromosome CDS945963 3021 + 0.397882
hemK CCA00659 modification methylase, HemK familyRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS750957 852 - 0.400235
hisS CCA00076 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS93655 1293 + 0.400619
ileS CCA00664 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS756707 3132 - 0.38378
infA CCA00699 translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS807828 222 - 0.423423
infB CCA00465 translation initiation factor 2RecName: Full=Translation initiation factor IF-2; chromosome CDS524404 2664 - 0.397523
infC CCA00771 translation initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS880779 561 - 0.392157
ksgA CCA00303 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS353724 837 + 0.422939
leuS CCA00612 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS696140 2463 - 0.414129
lysS CCA00839 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS963052 1578 - 0.387833
map CCA00752 methionine aminopeptidase, type IRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS862290 876 + 0.410959
metG CCA00651 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS744504 1653 - 0.396854
miaA CCA00858 tRNA delta(2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS980525 1029 - 0.420797
pheS CCA00768 phenylalanyl-tRNA synthetase, alpha subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS879185 1026 - 0.388889
pnpA CCA00762 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS868515 2085 + 0.39952
prfA CCA00660 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS751786 1086 - 0.415285
prfB CCA00166 peptide chain release factor 2SubName: Full=Peptide chain release factor 2; chromosome CDS172781 1014 + 0.420118
proS CCA00244 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS258827 1734 - 0.426182
pth CCA00819 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS942040 552 - 0.425725
rbfA CCA00464 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS524035 363 - 0.358127
rnpA CCA00835 ribonuclease P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS959785 420 + 0.397619
rplA CCA00694 ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS804239 699 - 0.402003
rplB CCA00096 ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS109758 855 + 0.425731
rplC CCA00093 ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS108028 666 + 0.408408
rplD CCA00094 ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS108710 675 + 0.407407
rplE CCA00105 ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS113590 543 + 0.399632
rplF CCA00107 ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS114584 552 + 0.411232
rplI CCA00816 ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS940818 519 - 0.410405
rplJ CCA00693 ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS803713 513 - 0.376218
rplK CCA00695 ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS804960 426 - 0.403756
rplL CCA00692 ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS803279 393 - 0.384224
rplM CCA00532 ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS602542 453 + 0.381898
rplN CCA00103 ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS112864 369 + 0.398374
rplO CCA00110 ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS116035 435 + 0.381609
rplP CCA00100 ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS111945 417 + 0.429257
rplQ CCA00115 ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS119870 429 + 0.370629
rplR CCA00108 ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS115158 372 + 0.376344
rplS CCA00655 ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS747766 366 - 0.431694
rplT CCA00769 ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS880223 366 - 0.396175
rplU CCA00197 ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS210216 321 + 0.380062
rplV CCA00098 ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS110903 336 + 0.449405
rplW CCA00095 ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS109401 336 + 0.383929
rplX CCA00104 ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS113247 342 + 0.391813
rpmA CCA00198 ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS210564 249 + 0.453815
rpmB CCA00455 ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS513975 270 - 0.418519
rpmC CCA00101 ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS112367 219 + 0.378995
rpmE CCA00661 ribosomal protein L31RecName: Full=50S ribosomal protein L31 type B; chromosome CDS753293 327 - 0.400612
rpmF CCA00808 ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS931819 183 - 0.409836
rpmG CCA00527 ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS598372 159 + 0.320755
rpmI CCA00770 ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS880607 195 - 0.415385
rpmJ CCA00834 ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS959234 138 - 0.405797
rpsA CCA00467 ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS528421 1746 - 0.373998
rpsB CCA00046 ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS56821 831 - 0.385078
rpsC CCA00099 ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS111247 672 + 0.424107
rpsD CCA00011 ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS16965 630 + 0.407937
rpsE CCA00109 ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS115545 498 + 0.401606
rpsF CCA00818 ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS941623 339 - 0.383481
rpsG CCA00191 ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS204627 474 + 0.409283
rpsH CCA00106 ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS114151 402 + 0.405473
rpsI CCA00533 ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS603008 405 + 0.37284
rpsJ CCA00193 ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS207234 318 + 0.427673
rpsK CCA00113 ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS118312 399 + 0.421053
rpsL CCA00190 ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS204212 372 + 0.44086
rpsM CCA00112 ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS117923 369 + 0.401084
rpsN CCA00833 ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS958903 306 - 0.424837
rpsO CCA00761 ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS868198 270 + 0.325926
rpsP CCA00657 ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS749237 360 - 0.413889
rpsQ CCA00102 ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS112578 252 + 0.373016
rpsR CCA00817 ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS941357 249 - 0.361446
rpsS CCA00097 ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS110618 267 + 0.374532
rpsT CCA01003 ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS1164009 297 + 0.343434
rpsU CCA00322 ribosomal protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS374317 177 + 0.418079
serS CCA00897 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS1037600 1281 + 0.401249
tgt CCA00581 queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS665038 1119 + 0.42538
thrS CCA00957 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1109660 1908 + 0.421908
trmD CCA00656 tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS748155 1068 - 0.399813
trmU CCA00354 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS405034 1083 + 0.421053
trpS CCA00961 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS1113691 1038 + 0.400771
tsf CCA00045 translation elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS55973 849 - 0.392226
tuf CCA00698 translation elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS806451 1185 - 0.424473
tyrS CCA00431 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS485409 1239 + 0.40678
valS CCA00678 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS781754 2823 - 0.399575