Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236
Number of genes found: 174
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| Rhodoferax ferrireducens DSM 15236, DSM 15236 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Rfer_0722 | ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 763097 | 393 | + | 0.552163 |
| NA | Rfer_4197 | expressed protein | SubName: Full=Expressed protein; | chromosome | CDS | 4666279 | 732 | - | 0.558743 |
| NA | Rfer_3180 | ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 3518514 | 234 | + | 0.542735 |
| NA | Rfer_3365 | tRNA-i(6)A37 modification enzyme MiaB | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 3735773 | 1359 | - | 0.614422 |
| NA | Rfer_2286 | CMP/dCMP deaminase, zinc-binding | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 2509495 | 1092 | - | 0.60348 |
| NA | Rfer_1337 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 1441422 | 516 | + | 0.562016 |
| NA | Rfer_1677 | tRNA/rRNA methyltransferase (SpoU) | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 1807969 | 486 | - | 0.619342 |
| NA | Rfer_2193 | ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 2395358 | 366 | + | 0.521858 |
| NA | Rfer_2765 | pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3053535 | 648 | - | 0.606481 |
| NA | Rfer_1090 | metal dependent phosphohydrolase | RecName: Full=Multifunctional CCA protein; | chromosome | CDS | 1165735 | 1302 | + | 0.644393 |
| NA | Rfer_0730 | D-tyrosyl-tRNA(Tyr) deacylase | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 770126 | 480 | + | 0.654167 |
| NA | Rfer_1382 | Small GTP-binding protein domain | SubName: Full=Small GTP-binding protein domain; | chromosome | CDS | 1494086 | 2055 | + | 0.636496 |
| NA | Rfer_2640 | RNA-binding S4 | SubName: Full=RNA-binding S4; | chromosome | CDS | 2904105 | 426 | + | 0.669014 |
| NA | Rfer_2771 | phospholipid N-methyltransferase | SubName: Full=Phospholipid N-methyltransferase; | chromosome | CDS | 3059669 | 579 | - | 0.533679 |
| NA | Rfer_3457 | RNA-binding S4 | SubName: Full=RNA-binding S4; | chromosome | CDS | 3848383 | 789 | + | 0.656527 |
| NA | Rfer_1895 | pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2034268 | 909 | - | 0.656766 |
| NA | Rfer_1402 | ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 1513010 | 252 | + | 0.587302 |
| NA | Rfer_4222 | translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 4695043 | 219 | - | 0.47032 |
| NA | Rfer_1269 | ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 1362674 | 258 | + | 0.569767 |
| NA | Rfer_4228 | ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 4698169 | 534 | - | 0.535581 |
| NA | Rfer_1905 | Glutamate--tRNA ligase | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 2045500 | 930 | - | 0.647312 |
| NA | Rfer_2196 | ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 2396372 | 453 | + | 0.540839 |
| NA | Rfer_2376 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; | chromosome | CDS | 2615474 | 2973 | + | 0.607467 |
| NA | Rfer_3183 | Fmu (Sun) | SubName: Full=Fmu (Sun); | chromosome | CDS | 3520376 | 1290 | - | 0.612403 |
| NA | Rfer_0628 | S-adenosylmethionine | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 651353 | 1083 | - | 0.644506 |
| NA | Rfer_3800 | ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 4241119 | 378 | - | 0.547619 |
| NA | Rfer_2136 | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 2317103 | 1017 | + | 0.588004 |
| NA | Rfer_1280 | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1373108 | 1101 | - | 0.648501 |
| NA | Rfer_3924 | glutamyl-tRNA(Gln) amidotransferase, C subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 4382987 | 300 | + | 0.616667 |
| NA | Rfer_2638 | methyltransferase small | SubName: Full=Methyltransferase small; | chromosome | CDS | 2902292 | 1230 | + | 0.64878 |
| NA | Rfer_3925 | glutamyl-tRNA(Gln) amidotransferase, A subunit | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 4383312 | 1482 | + | 0.637652 |
| NA | Rfer_4227 | ribosomal protein L18P/L5E | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 4697792 | 366 | - | 0.554645 |
| NA | Rfer_3756 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 4189299 | 1155 | + | 0.621645 |
| NA | Rfer_3859 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4308459 | 972 | - | 0.656379 |
| NA | Rfer_1823 | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; | chromosome | CDS | 1958399 | 1863 | - | 0.622115 |
| NA | Rfer_4219 | ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 4694050 | 405 | - | 0.540741 |
| NA | Rfer_0765 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 801508 | 948 | + | 0.646624 |
| NA | Rfer_1279 | modification methylase, HemK family | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 1372185 | 843 | - | 0.690391 |
| NA | Rfer_3788 | ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 4231919 | 417 | - | 0.527578 |
| NA | Rfer_3238 | Sua5/YciO/YrdC/YwlC | SubName: Full=Sua5/YciO/YrdC/YwlC; | chromosome | CDS | 3588752 | 624 | + | 0.61859 |
| NA | Rfer_1662 | Aminoacyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1793597 | 678 | + | 0.575221 |
| NA | Rfer_3791 | ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 4233591 | 279 | - | 0.498208 |
| NA | Rfer_1728 | ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1865573 | 183 | + | 0.562842 |
| NA | Rfer_3181 | ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 3518759 | 171 | + | 0.461988 |
| NA | Rfer_3787 | ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 4231697 | 207 | - | 0.502415 |
| NA | Rfer_0096 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 98638 | 786 | - | 0.597964 |
| NA | Rfer_2506 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; Flags: Precursor; | chromosome | CDS | 2768019 | 456 | + | 0.574561 |
| NA | Rfer_3595 | ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 4007137 | 696 | - | 0.571839 |
| NA | Rfer_1489 | 3' exoribonuclease | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 1602173 | 2121 | + | 0.594059 |
| NA | Rfer_3579 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; Flags: Precursor; | chromosome | CDS | 3981305 | 1266 | - | 0.638231 |
| NA | Rfer_1250 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 1344138 | 774 | + | 0.471576 |
| NA | Rfer_3544 | RNA-binding S4 | SubName: Full=RNA-binding S4; | chromosome | CDS | 3941024 | 915 | + | 0.631694 |
| NA | Rfer_3794 | ribosomal protein L4/L1e | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 4235031 | 621 | - | 0.529791 |
| NA | Rfer_3593 | ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 4005918 | 372 | - | 0.561828 |
| NA | Rfer_2976 | Pseudouridine synthase, Rsu | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3282938 | 744 | + | 0.634409 |
| NA | Rfer_1386 | Class I peptide chain release factor | SubName: Full=Class I peptide chain release factor; | chromosome | CDS | 1499407 | 426 | + | 0.631455 |
| NA | Rfer_2993 | Asparaginase | SubName: Full=Asparaginase; EC=3.5.1.1; Flags: Precursor; | chromosome | CDS | 3300350 | 1026 | - | 0.631579 |
| NA | Rfer_0653 | ribosomal RNA methyltransferase RrmJ/FtsJ | SubName: Full=Ribosomal RNA methyltransferase RrmJ/FtsJ; | chromosome | CDS | 677672 | 822 | + | 0.609489 |
| NA | Rfer_3351 | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 3721698 | 906 | - | 0.592715 |
| NA | Rfer_3243 | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 3594384 | 1359 | - | 0.599706 |
| NA | Rfer_2202 | Peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 2407444 | 561 | + | 0.609626 |
| NA | Rfer_1720 | ribonuclease, Rne/Rng family | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 1856782 | 3024 | - | 0.62963 |
| NA | Rfer_0728 | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; | chromosome | CDS | 767940 | 1245 | + | 0.609639 |
| NA | Rfer_4192 | expressed protein | SubName: Full=Expressed protein; | chromosome | CDS | 4662013 | 681 | - | 0.565345 |
| NA | Rfer_1413 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; | chromosome | CDS | 1521515 | 1872 | + | 0.600962 |
| NA | Rfer_3275 | methionyl-tRNA synthetase | RecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; | chromosome | CDS | 3634355 | 2103 | + | 0.582501 |
| NA | Rfer_4224 | ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 4696611 | 432 | - | 0.541667 |
| NA | Rfer_4232 | ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 4699999 | 321 | - | 0.504673 |
| NA | Rfer_1967 | beta-lactamase-like | SubName: Full=Beta-lactamase-like; | chromosome | CDS | 2112188 | 1365 | - | 0.645421 |
| NA | Rfer_3795 | ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 4235651 | 687 | - | 0.564774 |
| NA | Rfer_4220 | ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 4694474 | 366 | - | 0.527322 |
| NA | Rfer_1629 | ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 1760267 | 732 | + | 0.607924 |
| NA | Rfer_2891 | RNA methyltransferase TrmH, group 1 | SubName: Full=RNA methyltransferase TrmH, group 1; | chromosome | CDS | 3193131 | 861 | - | 0.60511 |
| NA | Rfer_0195 | Sua5/YciO/YrdC/YwlC | SubName: Full=Translation factor SUA5; | chromosome | CDS | 193116 | 1170 | - | 0.674359 |
| NA | Rfer_0328 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 327448 | 789 | - | 0.652725 |
| NA | Rfer_0750 | sigma 54 modulation protein/ribosomal protein S30EA | SubName: Full=SSU ribosomal protein S30P / sigma 54 modulation protein; | chromosome | CDS | 786434 | 330 | + | 0.530303 |
| NA | Rfer_1988 | Amidase | SubName: Full=Amidase; | chromosome | CDS | 2143437 | 1410 | - | 0.647518 |
| NA | Rfer_1268 | ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 1362267 | 396 | + | 0.512626 |
| NA | Rfer_1757 | translation initiation factor SUI1 | SubName: Full=Translation initiation factor 1 (EIF-1/SUI1); | chromosome | CDS | 1890867 | 363 | + | 0.661157 |
| NA | Rfer_1721 | Pseudouridine synthase, RluD | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1860331 | 1041 | + | 0.59366 |
| NA | Rfer_3790 | ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 4233251 | 330 | - | 0.530303 |
| NA | Rfer_3240 | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; | chromosome | CDS | 3590119 | 1299 | + | 0.596613 |
| NA | Rfer_3799 | ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 4240496 | 474 | - | 0.559072 |
| NA | Rfer_3792 | ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 4233881 | 825 | - | 0.563636 |
| NA | Rfer_3793 | Ribosomal protein L25/L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 4234708 | 327 | - | 0.507645 |
| NA | Rfer_0758 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 791439 | 2679 | + | 0.609183 |
| NA | Rfer_4225 | ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 4697053 | 183 | - | 0.469945 |
| NA | Rfer_4216 | ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 4691744 | 399 | - | 0.528822 |
| NA | Rfer_2169 | DEAD/DEAH box helicase-like | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; Flags: Precursor; | chromosome | CDS | 2364147 | 1725 | - | 0.633623 |
| NA | Rfer_2778 | RNA methyltransferase, TrmA family | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 3065109 | 1434 | - | 0.59205 |
| NA | Rfer_1975 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 2119856 | 1395 | + | 0.580645 |
| NA | Rfer_1403 | 16S rRNA processing protein RimM | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 1513272 | 564 | + | 0.576241 |
| NA | Rfer_0721 | ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 762655 | 432 | + | 0.541667 |
| NA | Rfer_2509 | poly(A) polymerase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 2770986 | 1608 | - | 0.613184 |
| NA | Rfer_0712 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 753416 | 1131 | - | 0.599469 |
| NA | Rfer_2122 | ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 2299022 | 303 | - | 0.564356 |
| NA | Rfer_1566 | ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 1691006 | 1701 | - | 0.583186 |
| NA | Rfer_2009 | protein of unknown function UPF0044 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2166067 | 474 | - | 0.584388 |
| NA | Rfer_0935 | YjgF-like protein | SubName: Full=YjgF-like protein; | chromosome | CDS | 985194 | 393 | + | 0.613232 |
| NA | Rfer_3798 | translation elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 4238230 | 2103 | - | 0.553971 |
| NA | Rfer_4231 | ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 4699457 | 540 | - | 0.518519 |
| NA | Rfer_2314 | Pseudouridine synthase, RluD | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2537371 | 1005 | - | 0.579104 |
| NA | Rfer_3796 | ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 4236536 | 315 | - | 0.511111 |
| NA | Rfer_3599 | translation elongation factor Tu | RecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; | chromosome | CDS | 4009644 | 1191 | - | 0.596977 |
| NA | Rfer_4077 | cytochrome c, class I | SubName: Full=Cytochrome c, class I; Flags: Precursor; | chromosome | CDS | 4546230 | 330 | - | 0.515152 |
| NA | Rfer_1336 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; | chromosome | CDS | 1439257 | 2010 | + | 0.556716 |
| NA | Rfer_3749 | Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 4181010 | 1065 | - | 0.635681 |
| NA | Rfer_1990 | translation elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 2145780 | 924 | + | 0.589827 |
| NA | Rfer_3596 | ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 4007833 | 432 | - | 0.530093 |
| NA | Rfer_0754 | SmpA/OmlA | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 788926 | 513 | + | 0.625731 |
| NA | Rfer_4218 | ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 4693331 | 624 | - | 0.504808 |
| NA | Rfer_2232 | RNA methyltransferase TrmH, group 3 | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 2447502 | 771 | + | 0.613489 |
| NA | Rfer_3926 | glutamyl-tRNA(Gln) amidotransferase, B subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 4384796 | 1491 | + | 0.604292 |
| NA | Rfer_3577 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; | chromosome | CDS | 3979493 | 1422 | + | 0.627286 |
| NA | Rfer_4230 | ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 4699143 | 297 | - | 0.555556 |
| NA | Rfer_3590 | sun protein | SubName: Full=Sun protein; Flags: Precursor; | chromosome | CDS | 3995777 | 1365 | - | 0.610256 |
| NA | Rfer_3860 | Peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 4309427 | 510 | - | 0.582353 |
| NA | Rfer_4060 | putative transmembrane protein | SubName: Full=Putative transmembrane protein; Flags: Precursor; | chromosome | CDS | 4527788 | 963 | - | 0.630322 |
| NA | Rfer_2082 | ribonuclease, Rne/Rng family | SubName: Full=RNAse G; EC=3.1.4.-; | chromosome | CDS | 2256402 | 1476 | + | 0.588076 |
| NA | Rfer_1340 | phenylalanyl-tRNA synthetase, alpha subunit | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 1442892 | 1074 | + | 0.590317 |
| NA | Rfer_4226 | ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 4697250 | 525 | - | 0.521905 |
| NA | Rfer_1274 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 1366512 | 1803 | + | 0.627288 |
| NA | Rfer_1297 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 1391057 | 1836 | + | 0.574074 |
| NA | Rfer_4244 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4711431 | 411 | - | 0.59854 |
| NA | Rfer_1784 | lysyl-tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 1919356 | 1563 | - | 0.616763 |
| NA | Rfer_2043 | modification methylase, HemK family | SubName: Full=Modification methylase, HemK family; EC=2.1.1.72; | chromosome | CDS | 2210997 | 933 | - | 0.6388 |
| NA | Rfer_2306 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; | chromosome | CDS | 2529071 | 1314 | - | 0.557839 |
| NA | Rfer_3797 | translation elongation factor Tu | RecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; | chromosome | CDS | 4236859 | 1191 | - | 0.594458 |
| NA | Rfer_2681 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 2951768 | 1389 | - | 0.572354 |
| NA | Rfer_1339 | ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 1442361 | 360 | + | 0.55 |
| NA | Rfer_3028 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; | chromosome | CDS | 3342906 | 1521 | - | 0.604865 |
| NA | Rfer_1535 | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 1651862 | 1053 | - | 0.662868 |
| NA | Rfer_1661 | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 1792838 | 672 | + | 0.580357 |
| NA | Rfer_4229 | ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 4698729 | 396 | - | 0.520202 |
| NA | Rfer_0590 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 612882 | 2631 | - | 0.624857 |
| NA | Rfer_2135 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 2316730 | 369 | + | 0.588076 |
| NA | Rfer_0773 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 809683 | 1698 | + | 0.621908 |
| NA | Rfer_2885 | ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 3188785 | 213 | + | 0.558685 |
| NA | Rfer_3696 | Glycine--tRNA ligase | SubName: Full=Glycine--tRNA ligase; EC=6.1.1.14; | chromosome | CDS | 4129109 | 978 | - | 0.599182 |
| NA | Rfer_2242 | translation elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 2455677 | 555 | - | 0.513514 |
| NA | Rfer_0852 | methionine aminopeptidase, type I | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 888653 | 792 | + | 0.59596 |
| NA | Rfer_2010 | ribosomal RNA methyltransferase RrmJ/FtsJ | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 2166569 | 675 | + | 0.567407 |
| NA | Rfer_1432 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; | chromosome | CDS | 1542489 | 2928 | - | 0.60724 |
| NA | Rfer_1488 | ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 1601705 | 267 | + | 0.543071 |
| NA | Rfer_0626 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 648806 | 1218 | - | 0.627258 |
| NA | Rfer_2195 | ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 2396076 | 285 | + | 0.529825 |
| NA | Rfer_2900 | ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 3209170 | 324 | + | 0.524691 |
| NA | Rfer_2003 | tRNA/rRNA methyltransferase (SpoU) | SubName: Full=tRNA/rRNA methyltransferase (SpoU); | chromosome | CDS | 2158741 | 795 | + | 0.615094 |
| NA | Rfer_1341 | phenylalanyl-tRNA synthetase, beta subunit | RecName: Full=Phenylalanine--tRNA ligase beta subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase beta subunit; | chromosome | CDS | 1443990 | 2433 | + | 0.599671 |
| NA | Rfer_1590 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 1720996 | 603 | + | 0.606965 |
| NA | Rfer_2827 | 3'-5' exonuclease | SubName: Full=3-5 exonuclease; | chromosome | CDS | 3127263 | 597 | - | 0.641541 |
| NA | Rfer_3695 | Glycine--tRNA ligase | SubName: Full=Glycine--tRNA ligase; EC=6.1.1.14; | chromosome | CDS | 4126786 | 2235 | - | 0.632215 |
| NA | Rfer_4245 | ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 4711934 | 135 | - | 0.622222 |
| NA | Rfer_4233 | ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 4700329 | 369 | - | 0.528455 |
| NA | Rfer_2312 | Pseudouridine synthase, Rsu | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2535152 | 1401 | - | 0.58601 |
| NA | Rfer_3786 | ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 4231417 | 270 | - | 0.518519 |
| NA | Rfer_0085 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 85846 | 819 | + | 0.650794 |
| NA | Rfer_2842 | 2',5' RNA ligase | SubName: Full=2,5 RNA ligase; | chromosome | CDS | 3139901 | 543 | - | 0.635359 |
| NA | Rfer_0969 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1019560 | 402 | + | 0.539801 |
| NA | Rfer_0645 | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 667781 | 1632 | - | 0.63174 |
| NA | Rfer_1992 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 2147596 | 561 | + | 0.559715 |
| NA | Rfer_3789 | ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 4232338 | 897 | - | 0.589744 |
| NA | Rfer_1790 | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 1925966 | 783 | - | 0.600255 |
| NA | Rfer_1405 | ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 1514761 | 381 | + | 0.52231 |
| NA | Rfer_2421 | methionine aminopeptidase, type I | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 2669448 | 828 | + | 0.605072 |
| NA | Rfer_1338 | ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 1442114 | 222 | + | 0.536036 |
| NA | Rfer_0989 | Amidase | SubName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; EC=6.3.5.-; | chromosome | CDS | 1038670 | 1413 | - | 0.611465 |
| NA | Rfer_1989 | ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 2144940 | 753 | + | 0.547145 |
| NA | Rfer_1404 | tRNA (guanine-N1)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 1513846 | 747 | + | 0.60241 |
| NA | Rfer_4221 | ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 4694864 | 132 | - | 0.469697 |
| NA | Rfer_3247 | putative transcriptional regulatory protein NadR (probably AsnC-family) | SubName: Full=Putative transcriptional regulatory protein NadR (Probably AsnC-family); | chromosome | CDS | 3599313 | 585 | - | 0.608547 |
| NA | Rfer_1349 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 1451957 | 1413 | + | 0.58528 |
| NA | Rfer_2134 | translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 2313765 | 2937 | + | 0.602996 |
| NA | Rfer_3594 | ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 4006332 | 537 | - | 0.56797 |
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