Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Jannaschia sp. CCS1, CCS1
Number of genes found: 192
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Jannaschia sp. CCS1, CCS1 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Jann_0582 | ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 570883 | 312 | + | 0.583333 |
NA | Jann_4064 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 4169061 | 681 | + | 0.654919 |
NA | Jann_3099 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 3135690 | 762 | + | 0.608924 |
NA | Jann_3706 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 3791507 | 396 | - | 0.585859 |
NA | Jann_0450 | ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 452987 | 201 | + | 0.562189 |
NA | Jann_0600 | ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 581558 | 231 | + | 0.588745 |
NA | Jann_1574 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like protein; | chromosome | CDS | 1552377 | 2121 | - | 0.668553 |
NA | Jann_0591 | ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 576023 | 744 | + | 0.603495 |
NA | Jann_2539 | ribonuclease, Rne/Rng family | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 2540632 | 2673 | - | 0.63786 |
NA | Jann_0611 | ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 586533 | 474 | + | 0.622363 |
NA | Jann_0609 | ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 585464 | 186 | + | 0.596774 |
NA | Jann_2236 | Dihydrouridine synthase TIM-barrel protein nifR3 | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 2240715 | 1044 | + | 0.652299 |
NA | Jann_0604 | ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 583120 | 306 | + | 0.584967 |
NA | Jann_1081 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 1044734 | 525 | + | 0.60381 |
NA | Jann_1786 | ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1774191 | 204 | - | 0.583333 |
NA | Jann_0592 | ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 576780 | 414 | + | 0.615942 |
NA | Jann_1304 | Amidase | SubName: Full=Amidase; | chromosome | CDS | 1263079 | 1314 | - | 0.652207 |
NA | Jann_3254 | translation elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 3304481 | 564 | + | 0.565603 |
NA | Jann_1842 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase 1; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 1; Short=GluRS 1; | chromosome | CDS | 1827575 | 1413 | - | 0.633404 |
NA | Jann_0577 | translation elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 565452 | 2121 | + | 0.595002 |
NA | Jann_2433 | tRNA/rRNA methyltransferase (SpoU) | SubName: Full=tRNA/rRNA methyltransferase (SpoU); | chromosome | CDS | 2427327 | 777 | - | 0.647362 |
NA | Jann_1109 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1069721 | 399 | + | 0.64411 |
NA | Jann_0744 | tRNA (guanine-N1)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 713070 | 828 | - | 0.654589 |
NA | Jann_1806 | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1794617 | 1065 | + | 0.638498 |
NA | Jann_0115 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like protein; | chromosome | CDS | 105076 | 1356 | + | 0.64528 |
NA | Jann_3596 | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 3672330 | 651 | - | 0.606759 |
NA | Jann_1330 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1294788 | 405 | + | 0.560494 |
NA | Jann_1958 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 1951311 | 1362 | + | 0.612335 |
NA | Jann_0599 | ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 581343 | 210 | + | 0.590476 |
NA | Jann_3592 | Aminoacyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 3669005 | 720 | - | 0.640278 |
NA | Jann_3080 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 3113809 | 405 | - | 0.57037 |
NA | Jann_3977 | Amidase | SubName: Full=Amidase; | chromosome | CDS | 4076868 | 1278 | + | 0.62989 |
NA | Jann_4028 | Polyribonucleotide nucleotidyltransferase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 4131134 | 2121 | - | 0.602075 |
NA | Jann_0589 | ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 575368 | 279 | + | 0.562724 |
NA | Jann_1225 | ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 1182769 | 168 | - | 0.517857 |
NA | Jann_1620 | ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 1608904 | 636 | - | 0.608491 |
NA | Jann_2305 | translation elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 2308961 | 876 | - | 0.623288 |
NA | Jann_4121 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4229069 | 864 | + | 0.628472 |
NA | Jann_0741 | ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 711792 | 222 | - | 0.594595 |
NA | Jann_2872 | translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 2893447 | 219 | - | 0.547945 |
NA | Jann_0026 | Class I peptide chain release factor | SubName: Full=Class I peptide chain release factor; | chromosome | CDS | 24321 | 420 | - | 0.680952 |
NA | Jann_3311 | helicase-like | SubName: Full=Helicase-like protein; | chromosome | CDS | 3364359 | 2937 | - | 0.660878 |
NA | Jann_1788 | SmpA/OmlA | SubName: Full=SmpA/OmlA; | chromosome | CDS | 1775404 | 465 | + | 0.621505 |
NA | Jann_1981 | ribosomal RNA methyltransferase RrmJ/FtsJ | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 1977006 | 714 | + | 0.640056 |
NA | Jann_0285 | methionine aminopeptidase, type I | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 290667 | 810 | + | 0.602469 |
NA | Jann_3467 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; | chromosome | CDS | 3518700 | 2979 | + | 0.631756 |
NA | Jann_0575 | ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 564499 | 372 | + | 0.599462 |
NA | Jann_0583 | ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 571210 | 873 | + | 0.61512 |
NA | Jann_1987 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 1985000 | 2655 | + | 0.624859 |
NA | Jann_0749 | ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 717028 | 393 | - | 0.633588 |
NA | Jann_2675 | D-tyrosyl-tRNA(Tyr) deacylase | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 2685808 | 444 | + | 0.632883 |
NA | Jann_0564 | ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 549578 | 699 | + | 0.610873 |
NA | Jann_3667 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 3744082 | 504 | - | 0.569444 |
NA | Jann_2665 | putative mRNA 3-end processing factor | SubName: Full=Putative mRNA 3-end processing factor; | chromosome | CDS | 2675576 | 1008 | + | 0.645833 |
NA | Jann_2731 | Glycine--tRNA ligase | SubName: Full=Glycyl-tRNA synthetase beta chain; EC=6.1.1.14; | chromosome | CDS | 2743519 | 2220 | - | 0.604054 |
NA | Jann_3617 | lysyl-tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 3689164 | 1647 | - | 0.574985 |
NA | Jann_0081 | Polynucleotide adenylyltransferase protein | SubName: Full=Polynucleotide adenylyltransferase protein; | chromosome | CDS | 74838 | 1140 | + | 0.654386 |
NA | Jann_1807 | modification methylase, HemK family | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 1795690 | 831 | + | 0.630566 |
NA | Jann_2801 | RNA methyltransferase TrmH, group 3 | SubName: Full=RNA methyltransferase TrmH group 3; | chromosome | CDS | 2814008 | 783 | - | 0.666667 |
NA | Jann_0468 | formylmethionine deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 466988 | 495 | + | 0.628283 |
NA | Jann_0426 | Amidase | SubName: Full=Amidase; | chromosome | CDS | 428619 | 1323 | + | 0.640967 |
NA | Jann_3145 | methionyl-tRNA synthetase | RecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; | chromosome | CDS | 3184792 | 1713 | + | 0.619381 |
NA | Jann_4036 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 4139915 | 432 | - | 0.622685 |
NA | Jann_0467 | formylmethionine deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 466513 | 486 | + | 0.625514 |
NA | Jann_3879 | ribonuclease T2 | SubName: Full=Ribonuclease T2; | chromosome | CDS | 3978043 | 633 | - | 0.611374 |
NA | Jann_3147 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 3188027 | 585 | - | 0.622222 |
NA | Jann_0411 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 412990 | 2592 | - | 0.616127 |
NA | Jann_0823 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 779984 | 591 | + | 0.612521 |
NA | Jann_0602 | ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 582236 | 306 | + | 0.611111 |
NA | Jann_3110 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3144270 | 339 | + | 0.610619 |
NA | Jann_3166 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 3205115 | 1776 | - | 0.605856 |
NA | Jann_0945 | Histidine--tRNA ligase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 902524 | 1518 | + | 0.623188 |
NA | Jann_2634 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2649753 | 612 | + | 0.629085 |
NA | Jann_0319 | MiaB-like tRNA modifying enzyme | SubName: Full=MiaB-like tRNA modifying enzyme; | chromosome | CDS | 326486 | 1260 | + | 0.605556 |
NA | Jann_3891 | ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 3987535 | 207 | + | 0.560386 |
NA | Jann_1621 | ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 1609552 | 228 | - | 0.609649 |
NA | Jann_0479 | Zinc finger/thioredoxin putative | SubName: Full=Zinc finger/thioredoxin putative; | chromosome | CDS | 475951 | 825 | + | 0.638788 |
NA | Jann_2425 | ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 2420771 | 495 | - | 0.644444 |
NA | Jann_1878 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1866800 | 534 | - | 0.638577 |
NA | Jann_0576 | ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 564886 | 471 | + | 0.607219 |
NA | Jann_0578 | translation elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 567648 | 1176 | + | 0.610544 |
NA | Jann_0755 | acetyltransferase, GNAT family | SubName: Full=Acetyltransferase GNAT family; | chromosome | CDS | 719804 | 528 | - | 0.668561 |
NA | Jann_3462 | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 3512238 | 786 | - | 0.643766 |
NA | Jann_0585 | Ribosomal protein L25/L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 572699 | 297 | + | 0.579125 |
NA | Jann_4011 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4113597 | 606 | - | 0.630363 |
NA | Jann_2500 | glutamyl-tRNA synthetase, class Ic | SubName: Full=Glutamyl-tRNA synthetase class Ic; | chromosome | CDS | 2498565 | 885 | + | 0.629379 |
NA | Jann_0603 | ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 582541 | 561 | + | 0.568627 |
NA | Jann_0039 | protein of unknown function DUF448 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 37659 | 633 | - | 0.619273 |
NA | Jann_3610 | tRNA/rRNA methyltransferase (SpoU) | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 3684693 | 501 | - | 0.59481 |
NA | Jann_1809 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 1797474 | 918 | - | 0.671024 |
NA | Jann_0469 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 467482 | 906 | + | 0.644592 |
NA | Jann_0961 | ribosomal L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 919728 | 873 | + | 0.643757 |
NA | Jann_0452 | phenylalanyl-tRNA synthetase, alpha subunit | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 453704 | 1074 | + | 0.638734 |
NA | Jann_0901 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 856984 | 945 | + | 0.621164 |
NA | Jann_2280 | ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 2286907 | 777 | + | 0.620335 |
NA | Jann_1507 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 1476738 | 1728 | + | 0.601273 |
NA | Jann_1866 | glutamyl-tRNA(Gln) amidotransferase, B subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 1852825 | 1512 | - | 0.632937 |
NA | Jann_2461 | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 2454720 | 867 | + | 0.686275 |
NA | Jann_1200 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like protein; | chromosome | CDS | 1160864 | 1935 | - | 0.648062 |
NA | Jann_2498 | gid protein | RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO; EC=2.1.1.74; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase; | chromosome | CDS | 2496542 | 1377 | + | 0.637618 |
NA | Jann_1098 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; | chromosome | CDS | 1058300 | 1947 | - | 0.631741 |
NA | Jann_2733 | Glycine--tRNA ligase | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; | chromosome | CDS | 2746196 | 930 | - | 0.629032 |
NA | Jann_1222 | glutamyl-tRNA(Gln) amidotransferase, C subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 1181423 | 288 | - | 0.600694 |
NA | Jann_0228 | 3'-5' exonuclease | SubName: Full=3-5 exonuclease; | chromosome | CDS | 222405 | 612 | - | 0.576797 |
NA | Jann_0563 | ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 549119 | 453 | + | 0.587196 |
NA | Jann_2138 | TIM-barrel protein, yjbN family | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 2145849 | 990 | + | 0.624242 |
NA | Jann_3477 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; | chromosome | CDS | 3528059 | 3090 | - | 0.624919 |
NA | Jann_0206 | ribonuclease PH | SubName: Full=RNAse PH; EC=2.7.7.56; | chromosome | CDS | 197503 | 630 | - | 0.607937 |
NA | Jann_0038 | translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 35188 | 2475 | - | 0.630303 |
NA | Jann_0697 | tRNA-i(6)A37 modification enzyme MiaB | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 669900 | 1389 | + | 0.62491 |
NA | Jann_2520 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 2520139 | 1131 | - | 0.643678 |
NA | Jann_0567 | ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 551508 | 375 | + | 0.589333 |
NA | Jann_0954 | RNA-binding S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 913539 | 621 | + | 0.615137 |
NA | Jann_4058 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 4163082 | 537 | + | 0.642458 |
NA | Jann_2306 | ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 2309915 | 831 | - | 0.618532 |
NA | Jann_1221 | glutamyl-tRNA(Gln) amidotransferase, A subunit | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 1179939 | 1485 | - | 0.639731 |
NA | Jann_3636 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase 2; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 2; Short=GluRS 2; | chromosome | CDS | 3709640 | 1350 | - | 0.635556 |
NA | Jann_2507 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 2506754 | 1143 | + | 0.632546 |
NA | Jann_1015 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 968162 | 1377 | - | 0.627451 |
NA | Jann_1717 | Queuosine biosynthesis protein | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 1700998 | 1068 | + | 0.628277 |
NA | Jann_3997 | ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 4101762 | 126 | + | 0.595238 |
NA | Jann_0607 | ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 584391 | 360 | + | 0.602778 |
NA | Jann_2727 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 2738562 | 444 | + | 0.599099 |
NA | Jann_0894 | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; | chromosome | CDS | 848001 | 1026 | - | 0.614035 |
NA | Jann_1838 | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 1823833 | 1161 | + | 0.605512 |
NA | Jann_1983 | Fmu (Sun) | SubName: Full=Fmu (Sun); | chromosome | CDS | 1979289 | 1164 | + | 0.647766 |
NA | Jann_0616 | ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 590315 | 390 | + | 0.633333 |
NA | Jann_2869 | ribonuclease, Rne/Rng family | SubName: Full=Ribonuclease Rne/Rng family; | chromosome | CDS | 2891262 | 1035 | - | 0.68599 |
NA | Jann_4030 | ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 4134541 | 270 | - | 0.596296 |
NA | Jann_0618 | ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 592005 | 417 | + | 0.616307 |
NA | Jann_0605 | ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 583440 | 393 | + | 0.603053 |
NA | Jann_2281 | ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 2287691 | 270 | + | 0.588889 |
NA | Jann_1203 | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 1164035 | 1638 | - | 0.617827 |
NA | Jann_4034 | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 4138214 | 906 | - | 0.654525 |
NA | Jann_4040 | Fmu (Sun) | SubName: Full=Fmu (Sun); | chromosome | CDS | 4142035 | 1233 | + | 0.647202 |
NA | Jann_0590 | ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 575643 | 381 | + | 0.582677 |
NA | Jann_1685 | Pseudouridine synthase, Rsu | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1669181 | 567 | + | 0.633157 |
NA | Jann_3895 | Sua5/YciO/YrdC/YwlC | SubName: Full=Translation factor SUA5; | chromosome | CDS | 3991614 | 945 | + | 0.687831 |
NA | Jann_1622 | ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 1609842 | 354 | - | 0.596045 |
NA | Jann_1070 | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 1031167 | 1293 | - | 0.637278 |
NA | Jann_0742 | ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 712026 | 384 | - | 0.606771 |
NA | Jann_1060 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 1015865 | 1359 | + | 0.618837 |
NA | Jann_2533 | peptide chain release factor 2 | RecName: Full=Peptide chain release factor 2; Short=RF-2; | chromosome | CDS | 2532747 | 1128 | - | 0.602837 |
NA | Jann_0588 | ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 574522 | 843 | + | 0.615658 |
NA | Jann_0721 | ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 690962 | 1677 | + | 0.608229 |
NA | Jann_0086 | (Uracil-5)-methyltransferase | SubName: Full=23S rRNA m(5)U-1939 methyltransferase; EC=2.1.1.-; | chromosome | CDS | 80706 | 1260 | + | 0.642063 |
NA | Jann_0153 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 143230 | 507 | - | 0.631164 |
NA | Jann_4024 | pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 4126524 | 654 | + | 0.642202 |
NA | Jann_2426 | ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 2421265 | 552 | - | 0.588768 |
NA | Jann_0528 | 2',5' RNA ligase | SubName: Full=25 RNA ligase; | chromosome | CDS | 518153 | 537 | - | 0.646182 |
NA | Jann_0566 | ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 550933 | 513 | + | 0.592593 |
NA | Jann_3884 | methyltransferase small | SubName: Full=16S rRNA m(2)G 1207 methyltransferase; EC=2.1.1.171; | chromosome | CDS | 3981439 | 1011 | - | 0.626113 |
NA | Jann_3310 | RNA-binding S4 | SubName: Full=Heat shock protein Hsp15; | chromosome | CDS | 3363991 | 327 | - | 0.654434 |
NA | Jann_1120 | acetyltransferase, putative | SubName: Full=Acetyltransferase putative; | chromosome | CDS | 1079914 | 558 | - | 0.650538 |
NA | Jann_1768 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 1757083 | 666 | - | 0.575075 |
NA | Jann_3187 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 3229657 | 594 | + | 0.649832 |
NA | Jann_0624 | Pseudouridine synthase, RluD | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 596769 | 1065 | + | 0.664789 |
NA | Jann_2532 | Amidase | SubName: Full=Amidase; | chromosome | CDS | 2531281 | 1392 | - | 0.678161 |
NA | Jann_0642 | ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 613685 | 138 | - | 0.652174 |
NA | Jann_3444 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 3489968 | 492 | - | 0.640244 |
NA | Jann_1654 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1638620 | 357 | + | 0.588235 |
NA | Jann_0317 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 324813 | 555 | - | 0.587387 |
NA | Jann_1792 | tyrosyl-tRNA synthetase | SubName: Full=Tyrosyl-tRNA synthetase; EC=6.1.1.1; | chromosome | CDS | 1778873 | 795 | - | 0.615094 |
NA | Jann_3401 | Pseudouridine synthase, RluD | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3452959 | 933 | - | 0.665595 |
NA | Jann_0466 | Peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 465992 | 525 | + | 0.620952 |
NA | Jann_0752 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 718244 | 513 | - | 0.614035 |
NA | Jann_1670 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1653914 | 396 | + | 0.598485 |
NA | Jann_0584 | ribosomal protein L4/L1e | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 572082 | 621 | + | 0.626409 |
NA | Jann_0451 | ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 453200 | 360 | + | 0.611111 |
NA | Jann_0608 | ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 584867 | 594 | + | 0.636364 |
NA | Jann_0606 | ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 583846 | 534 | + | 0.593633 |
NA | Jann_3424 | ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 3472063 | 291 | + | 0.618557 |
NA | Jann_2800 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2813686 | 318 | - | 0.628931 |
NA | Jann_0601 | ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 581866 | 369 | + | 0.577236 |
NA | Jann_4212 | ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 4317215 | 267 | + | 0.617977 |
NA | Jann_0748 | 16S rRNA processing protein RimM | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 716245 | 564 | - | 0.659574 |
NA | Jann_0753 | acetyltransferase, GNAT family | SubName: Full=Acetyltransferase GNAT family; | chromosome | CDS | 718753 | 519 | - | 0.66474 |
NA | Jann_0615 | ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 589931 | 369 | + | 0.628726 |
NA | Jann_1218 | CMP/dCMP deaminase, zinc-binding | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 1177648 | 429 | + | 0.666667 |
NA | Jann_2297 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 2302848 | 342 | - | 0.611111 |
NA | Jann_0751 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 717753 | 495 | - | 0.636364 |
NA | Jann_1470 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1439931 | 390 | - | 0.64359 |
NA | Jann_2458 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 2451884 | 732 | - | 0.610656 |
NA | Jann_0754 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 719268 | 540 | - | 0.648148 |
NA | Jann_0435 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 440439 | 468 | + | 0.58547 |
NA | Jann_3582 | conserved hypothetical protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 3660389 | 1098 | - | 0.615665 |
NA | Jann_0641 | ribonuclease P protein component | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 613281 | 399 | - | 0.636591 |
NA | Jann_0555 | translation elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 543640 | 1176 | + | 0.610544 |
NA | Jann_2282 | acetyltransferase, GNAT family | SubName: Full=Acetyltransferase GNAT family; | chromosome | CDS | 2288080 | 570 | + | 0.591228 |
NA | Jann_1217 | Pseudouridine synthase, Rsu | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1176684 | 891 | - | 0.636364 |
NA | Jann_0224 | sigma 54 modulation protein/ribosomal protein S30EA | SubName: Full=Sigma 54 modulation protein / SSU ribosomal protein S30P; | chromosome | CDS | 219780 | 708 | - | 0.564972 |
NA | Jann_1143 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1104473 | 339 | + | 0.663717 |