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2024-05-02 12:28:47

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Jannaschia sp. CCS1, CCS1

Number of genes found: 192

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Jannaschia sp. CCS1, CCS1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Jann_3080 Endoribonuclease L-PSPchromosome CDS3113809 405 - 0.57037
NA Jann_2727 GCN5-related N-acetyltransferasechromosome CDS2738562 444 + 0.599099
NA Jann_0755 acetyltransferase, GNAT familychromosome CDS719804 528 - 0.668561
NA Jann_0584 ribosomal protein L4/L1echromosome CDS572082 621 + 0.626409
NA Jann_3401 Pseudouridine synthase, RluDchromosome CDS3452959 933 - 0.665595
NA Jann_3462 tRNA pseudouridine synthase Achromosome CDS3512238 786 - 0.643766
NA Jann_1620 ribosomal protein L9chromosome CDS1608904 636 - 0.608491
NA Jann_0153 hypothetical proteinchromosome CDS143230 507 - 0.631164
NA Jann_3444 Endoribonuclease L-PSPchromosome CDS3489968 492 - 0.640244
NA Jann_4212 ribosomal protein S20chromosome CDS4317215 267 + 0.617977
NA Jann_1217 Pseudouridine synthase, Rsuchromosome CDS1176684 891 - 0.636364
NA Jann_0588 ribosomal protein L2chromosome CDS574522 843 + 0.615658
NA Jann_1806 peptide chain release factor 1chromosome CDS1794617 1065 + 0.638498
NA Jann_0479 Zinc finger/thioredoxin putativechromosome CDS475951 825 + 0.638788
NA Jann_0600 ribosomal protein S17chromosome CDS581558 231 + 0.588745
NA Jann_1842 glutamyl-tRNA synthetasechromosome CDS1827575 1413 - 0.633404
NA Jann_1120 acetyltransferase, putativechromosome CDS1079914 558 - 0.650538
NA Jann_3582 conserved hypothetical proteinchromosome CDS3660389 1098 - 0.615665
NA Jann_0585 Ribosomal protein L25/L23chromosome CDS572699 297 + 0.579125
NA Jann_3636 glutamyl-tRNA synthetasechromosome CDS3709640 1350 - 0.635556
NA Jann_1222 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS1181423 288 - 0.600694
NA Jann_0450 ribosomal protein L35chromosome CDS452987 201 + 0.562189
NA Jann_0115 DEAD/DEAH box helicase-likechromosome CDS105076 1356 + 0.64528
NA Jann_0697 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS669900 1389 + 0.62491
NA Jann_2305 translation elongation factor Tschromosome CDS2308961 876 - 0.623288
NA Jann_0086 (Uracil-5)-methyltransferasechromosome CDS80706 1260 + 0.642063
NA Jann_0583 ribosomal protein L3chromosome CDS571210 873 + 0.61512
NA Jann_0601 ribosomal protein L14chromosome CDS581866 369 + 0.577236
NA Jann_2500 glutamyl-tRNA synthetase, class Icchromosome CDS2498565 885 + 0.629379
NA Jann_0224 sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS219780 708 - 0.564972
NA Jann_0748 16S rRNA processing protein RimMchromosome CDS716245 564 - 0.659574
NA Jann_2532 Amidasechromosome CDS2531281 1392 - 0.678161
NA Jann_2869 ribonuclease, Rne/Rng familychromosome CDS2891262 1035 - 0.68599
NA Jann_2665 putative mRNA 3-end processing factorchromosome CDS2675576 1008 + 0.645833
NA Jann_0590 ribosomal protein L22chromosome CDS575643 381 + 0.582677
NA Jann_0426 Amidasechromosome CDS428619 1323 + 0.640967
NA Jann_0435 Endoribonuclease L-PSPchromosome CDS440439 468 + 0.58547
NA Jann_3667 GCN5-related N-acetyltransferasechromosome CDS3744082 504 - 0.569444
NA Jann_1081 GCN5-related N-acetyltransferasechromosome CDS1044734 525 + 0.60381
NA Jann_3424 ribosomal protein L28chromosome CDS3472063 291 + 0.618557
NA Jann_0616 ribosomal protein S11chromosome CDS590315 390 + 0.633333
NA Jann_0954 RNA-binding S4chromosome CDS913539 621 + 0.615137
NA Jann_4121 conserved hypothetical proteinchromosome CDS4229069 864 + 0.628472
NA Jann_3099 GCN5-related N-acetyltransferasechromosome CDS3135690 762 + 0.608924
NA Jann_0901 glutathione synthetasechromosome CDS856984 945 + 0.621164
NA Jann_1958 cysteinyl-tRNA synthetasechromosome CDS1951311 1362 + 0.612335
NA Jann_1574 DEAD/DEAH box helicase-likechromosome CDS1552377 2121 - 0.668553
NA Jann_4028 Polyribonucleotide nucleotidyltransferasechromosome CDS4131134 2121 - 0.602075
NA Jann_0566 ribosomal protein L10chromosome CDS550933 513 + 0.592593
NA Jann_0575 ribosomal protein S12chromosome CDS564499 372 + 0.599462
NA Jann_0742 ribosomal protein L19chromosome CDS712026 384 - 0.606771
NA Jann_0604 ribosomal protein S14chromosome CDS583120 306 + 0.584967
NA Jann_2280 ribosomal protein L21chromosome CDS2286907 777 + 0.620335
NA Jann_3166 aspartyl-tRNA synthetasechromosome CDS3205115 1776 - 0.605856
NA Jann_1786 ribosomal protein L32chromosome CDS1774191 204 - 0.583333
NA Jann_3895 Sua5/YciO/YrdC/YwlCchromosome CDS3991614 945 + 0.687831
NA Jann_0319 MiaB-like tRNA modifying enzymechromosome CDS326486 1260 + 0.605556
NA Jann_1203 peptide chain release factor 3chromosome CDS1164035 1638 - 0.617827
NA Jann_0528 2',5' RNA ligasechromosome CDS518153 537 - 0.646182
NA Jann_2458 ribosome recycling factorchromosome CDS2451884 732 - 0.610656
NA Jann_4011 hypothetical proteinchromosome CDS4113597 606 - 0.630363
NA Jann_2507 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2506754 1143 + 0.632546
NA Jann_1098 threonyl-tRNA synthetasechromosome CDS1058300 1947 - 0.631741
NA Jann_0599 ribosomal protein L29chromosome CDS581343 210 + 0.590476
NA Jann_0961 ribosomal L11 methyltransferasechromosome CDS919728 873 + 0.643757
NA Jann_4040 Fmu (Sun)chromosome CDS4142035 1233 + 0.647202
NA Jann_1654 Endoribonuclease L-PSPchromosome CDS1638620 357 + 0.588235
NA Jann_2282 acetyltransferase, GNAT familychromosome CDS2288080 570 + 0.591228
NA Jann_0618 ribosomal protein L17chromosome CDS592005 417 + 0.616307
NA Jann_3477 valyl-tRNA synthetasechromosome CDS3528059 3090 - 0.624919
NA Jann_1200 DEAD/DEAH box helicase-likechromosome CDS1160864 1935 - 0.648062
NA Jann_1109 Endoribonuclease L-PSPchromosome CDS1069721 399 + 0.64411
NA Jann_4034 tRNA pseudouridine synthase Bchromosome CDS4138214 906 - 0.654525
NA Jann_0038 translation initiation factor IF-2chromosome CDS35188 2475 - 0.630303
NA Jann_0721 ribosomal protein S1chromosome CDS690962 1677 + 0.608229
NA Jann_0641 ribonuclease P protein componentchromosome CDS613281 399 - 0.636591
NA Jann_3310 RNA-binding S4chromosome CDS3363991 327 - 0.654434
NA Jann_0741 ribosomal protein L31chromosome CDS711792 222 - 0.594595
NA Jann_3610 tRNA/rRNA methyltransferase (SpoU)chromosome CDS3684693 501 - 0.59481
NA Jann_3467 isoleucyl-tRNA synthetasechromosome CDS3518700 2979 + 0.631756
NA Jann_0592 ribosomal protein L16chromosome CDS576780 414 + 0.615942
NA Jann_0567 ribosomal protein L7/L12chromosome CDS551508 375 + 0.589333
NA Jann_2675 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS2685808 444 + 0.632883
NA Jann_0451 ribosomal protein L20chromosome CDS453200 360 + 0.611111
NA Jann_1809 dimethyladenosine transferasechromosome CDS1797474 918 - 0.671024
NA Jann_0564 ribosomal protein L1chromosome CDS549578 699 + 0.610873
NA Jann_0467 formylmethionine deformylasechromosome CDS466513 486 + 0.625514
NA Jann_1987 alanyl-tRNA synthetasechromosome CDS1985000 2655 + 0.624859
NA Jann_0607 ribosomal protein L18chromosome CDS584391 360 + 0.602778
NA Jann_0603 ribosomal protein L5chromosome CDS582541 561 + 0.568627
NA Jann_3879 ribonuclease T2chromosome CDS3978043 633 - 0.611374
NA Jann_1717 Queuosine biosynthesis proteinchromosome CDS1700998 1068 + 0.628277
NA Jann_1621 ribosomal protein S18chromosome CDS1609552 228 - 0.609649
NA Jann_3187 GCN5-related N-acetyltransferasechromosome CDS3229657 594 + 0.649832
NA Jann_2634 hypothetical proteinchromosome CDS2649753 612 + 0.629085
NA Jann_2731 Glycine--tRNA ligasechromosome CDS2743519 2220 - 0.604054
NA Jann_2138 TIM-barrel protein, yjbN familychromosome CDS2145849 990 + 0.624242
NA Jann_4058 GCN5-related N-acetyltransferasechromosome CDS4163082 537 + 0.642458
NA Jann_0894 tryptophanyl-tRNA synthetasechromosome CDS848001 1026 - 0.614035
NA Jann_3706 Endoribonuclease L-PSPchromosome CDS3791507 396 - 0.585859
NA Jann_1838 ribonuclease Dchromosome CDS1823833 1161 + 0.605512
NA Jann_0317 GCN5-related N-acetyltransferasechromosome CDS324813 555 - 0.587387
NA Jann_0945 Histidine--tRNA ligasechromosome CDS902524 1518 + 0.623188
NA Jann_0752 GCN5-related N-acetyltransferasechromosome CDS718244 513 - 0.614035
NA Jann_2425 ribosomal protein S9chromosome CDS2420771 495 - 0.644444
NA Jann_0206 ribonuclease PHchromosome CDS197503 630 - 0.607937
NA Jann_0611 ribosomal protein L15chromosome CDS586533 474 + 0.622363
NA Jann_2426 ribosomal protein L13chromosome CDS2421265 552 - 0.588768
NA Jann_0609 ribosomal protein L30chromosome CDS585464 186 + 0.596774
NA Jann_4024 pseudouridine synthasechromosome CDS4126524 654 + 0.642202
NA Jann_0578 translation elongation factor Tuchromosome CDS567648 1176 + 0.610544
NA Jann_2297 Endoribonuclease L-PSPchromosome CDS2302848 342 - 0.611111
NA Jann_3596 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5chromosome CDS3672330 651 - 0.606759
NA Jann_1983 Fmu (Sun)chromosome CDS1979289 1164 + 0.647766
NA Jann_0608 ribosomal protein S5chromosome CDS584867 594 + 0.636364
NA Jann_2236 Dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS2240715 1044 + 0.652299
NA Jann_1768 translation initiation factor IF-3chromosome CDS1757083 666 - 0.575075
NA Jann_3617 lysyl-tRNA synthetasechromosome CDS3689164 1647 - 0.574985
NA Jann_2520 queuine tRNA-ribosyltransferasechromosome CDS2520139 1131 - 0.643678
NA Jann_4030 ribosomal protein S15chromosome CDS4134541 270 - 0.596296
NA Jann_1670 Endoribonuclease L-PSPchromosome CDS1653914 396 + 0.598485
NA Jann_3997 ribosomal protein L36chromosome CDS4101762 126 + 0.595238
NA Jann_0624 Pseudouridine synthase, RluDchromosome CDS596769 1065 + 0.664789
NA Jann_1218 CMP/dCMP deaminase, zinc-bindingchromosome CDS1177648 429 + 0.666667
NA Jann_0452 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS453704 1074 + 0.638734
NA Jann_1792 tyrosyl-tRNA synthetasechromosome CDS1778873 795 - 0.615094
NA Jann_3977 Amidasechromosome CDS4076868 1278 + 0.62989
NA Jann_0605 ribosomal protein S8chromosome CDS583440 393 + 0.603053
NA Jann_1060 prolyl-tRNA synthetasechromosome CDS1015865 1359 + 0.618837
NA Jann_2872 translation initiation factor IF-1chromosome CDS2893447 219 - 0.547945
NA Jann_0468 formylmethionine deformylasechromosome CDS466988 495 + 0.628283
NA Jann_2800 conserved hypothetical proteinchromosome CDS2813686 318 - 0.628931
NA Jann_3110 conserved hypothetical proteinchromosome CDS3144270 339 + 0.610619
NA Jann_0081 Polynucleotide adenylyltransferase proteinchromosome CDS74838 1140 + 0.654386
NA Jann_4036 ribosome-binding factor Achromosome CDS4139915 432 - 0.622685
NA Jann_0753 acetyltransferase, GNAT familychromosome CDS718753 519 - 0.66474
NA Jann_0606 ribosomal protein L6chromosome CDS583846 534 + 0.593633
NA Jann_3145 methionyl-tRNA synthetasechromosome CDS3184792 1713 + 0.619381
NA Jann_0591 ribosomal protein S3chromosome CDS576023 744 + 0.603495
NA Jann_3891 ribosomal protein S21chromosome CDS3987535 207 + 0.560386
NA Jann_0576 ribosomal protein S7chromosome CDS564886 471 + 0.607219
NA Jann_1070 seryl-tRNA synthetasechromosome CDS1031167 1293 - 0.637278
NA Jann_2461 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS2454720 867 + 0.686275
NA Jann_0751 GCN5-related N-acetyltransferasechromosome CDS717753 495 - 0.636364
NA Jann_1304 Amidasechromosome CDS1263079 1314 - 0.652207
NA Jann_3254 translation elongation factor Pchromosome CDS3304481 564 + 0.565603
NA Jann_0577 translation elongation factor Gchromosome CDS565452 2121 + 0.595002
NA Jann_0285 methionine aminopeptidase, type Ichromosome CDS290667 810 + 0.602469
NA Jann_0749 ribosomal protein S16chromosome CDS717028 393 - 0.633588
NA Jann_3592 Aminoacyl-tRNA hydrolasechromosome CDS3669005 720 - 0.640278
NA Jann_2433 tRNA/rRNA methyltransferase (SpoU)chromosome CDS2427327 777 - 0.647362
NA Jann_2733 Glycine--tRNA ligasechromosome CDS2746196 930 - 0.629032
NA Jann_0026 Class I peptide chain release factorchromosome CDS24321 420 - 0.680952
NA Jann_0563 ribosomal protein L11chromosome CDS549119 453 + 0.587196
NA Jann_1807 modification methylase, HemK familychromosome CDS1795690 831 + 0.630566
NA Jann_2533 peptide chain release factor 2chromosome CDS2532747 1128 - 0.602837
NA Jann_0615 ribosomal protein S13chromosome CDS589931 369 + 0.628726
NA Jann_1788 SmpA/OmlAchromosome CDS1775404 465 + 0.621505
NA Jann_1878 hypothetical proteinchromosome CDS1866800 534 - 0.638577
NA Jann_1221 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS1179939 1485 - 0.639731
NA Jann_0602 ribosomal protein L24chromosome CDS582236 306 + 0.611111
NA Jann_1143 hypothetical proteinchromosome CDS1104473 339 + 0.663717
NA Jann_4064 Nucleotidyl transferasechromosome CDS4169061 681 + 0.654919
NA Jann_0744 tRNA (guanine-N1)-methyltransferasechromosome CDS713070 828 - 0.654589
NA Jann_0466 Peptide deformylasechromosome CDS465992 525 + 0.620952
NA Jann_2281 ribosomal protein L27chromosome CDS2287691 270 + 0.588889
NA Jann_0589 ribosomal protein S19chromosome CDS575368 279 + 0.562724
NA Jann_0582 ribosomal protein S10chromosome CDS570883 312 + 0.583333
NA Jann_2306 ribosomal protein S2chromosome CDS2309915 831 - 0.618532
NA Jann_1470 Endoribonuclease L-PSPchromosome CDS1439931 390 - 0.64359
NA Jann_1330 Endoribonuclease L-PSPchromosome CDS1294788 405 + 0.560494
NA Jann_0754 GCN5-related N-acetyltransferasechromosome CDS719268 540 - 0.648148
NA Jann_2498 gid proteinchromosome CDS2496542 1377 + 0.637618
NA Jann_0469 methionyl-tRNA formyltransferasechromosome CDS467482 906 + 0.644592
NA Jann_1225 ribosomal protein L33chromosome CDS1182769 168 - 0.517857
NA Jann_3311 helicase-likechromosome CDS3364359 2937 - 0.660878
NA Jann_1622 ribosomal protein S6chromosome CDS1609842 354 - 0.596045
NA Jann_1015 conserved hypothetical proteinchromosome CDS968162 1377 - 0.627451
NA Jann_0642 ribosomal protein L34chromosome CDS613685 138 - 0.652174
NA Jann_1981 ribosomal RNA methyltransferase RrmJ/FtsJchromosome CDS1977006 714 + 0.640056
NA Jann_1866 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS1852825 1512 - 0.632937
NA Jann_3147 GCN5-related N-acetyltransferasechromosome CDS3188027 585 - 0.622222
NA Jann_2801 RNA methyltransferase TrmH, group 3chromosome CDS2814008 783 - 0.666667
NA Jann_1685 Pseudouridine synthase, Rsuchromosome CDS1669181 567 + 0.633157
NA Jann_0411 leucyl-tRNA synthetasechromosome CDS412990 2592 - 0.616127
NA Jann_2539 ribonuclease, Rne/Rng familychromosome CDS2540632 2673 - 0.63786
NA Jann_0228 3'-5' exonucleasechromosome CDS222405 612 - 0.576797
NA Jann_0039 protein of unknown function DUF448chromosome CDS37659 633 - 0.619273
NA Jann_3884 methyltransferase smallchromosome CDS3981439 1011 - 0.626113
NA Jann_0823 hypothetical proteinchromosome CDS779984 591 + 0.612521
NA Jann_0555 translation elongation factor Tuchromosome CDS543640 1176 + 0.610544
NA Jann_1507 arginyl-tRNA synthetasechromosome CDS1476738 1728 + 0.601273