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2024-05-05 21:46:41

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Syntrophus aciditrophicus SB

Number of genes found: 158

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Syntrophus aciditrophicus SB
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYN_03314 LSU ribosomal protein L5Pchromosome CDS319360 540 + 0.414815
NA SYN_01721 phenylalanyl-tRNA synthetase alpha chainchromosome CDS656245 1017 + 0.492625
NA SYN_00166 metallo-beta-lactamase proteinchromosome CDS76434 1626 + 0.53936
NA SYN_02029 2'-5' RNA ligasechromosome CDS342615 588 - 0.608844
NA SYN_01794 peptide release factor-glutamine N5-methyltransferasechromosome CDS2705431 951 - 0.580442
NA SYN_01454 isoleucyl-tRNA synthetasechromosome CDS1537905 2802 + 0.536759
NA SYN_01969 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1562883 918 + 0.525054
NA SYN_01592 SSU ribosomal protein S5Pchromosome CDS321598 495 + 0.450505
NA SYN_01918 protein translation Elongation Factor G (EF-G)chromosome CDS1970921 2034 - 0.514258
NA SYN_00641 LSU ribosomal protein L9Pchromosome CDS1951585 450 + 0.506667
NA SYN_00902 ribonuclease PHchromosome CDS1656484 723 + 0.50899
NA SYN_01795 bacterial peptide chain release factor 1 (rf-1)chromosome CDS2706378 1074 - 0.565177
NA SYN_00643 SSU ribosomal protein S18Pchromosome CDS1950205 267 + 0.490637
NA SYN_01518 poly A polymerasechromosome CDS1290237 1488 + 0.615591
NA SYN_01603 LSU ribosomal protein L17Pchromosome CDS328052 378 + 0.449735
NA SYN_01717 threonyl-tRNA synthetasechromosome CDS652895 1938 + 0.49484
NA SYN_02649 glucose-1-phosphate cytidylyltransferasechromosome CDS2654623 789 - 0.479087
NA SYN_00233 SSU ribosomal protein S9Pchromosome CDS334264 405 + 0.483951
NA SYN_02886 valyl-tRNA synthetasechromosome CDS2022603 2664 - 0.552553
NA SYN_00308 aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit Achromosome CDS2974726 1458 - 0.578189
NA SYN_00944 ribosome-associated factor Ychromosome CDS1232126 630 + 0.439683
NA SYN_00991 SSU ribosomal protein S3Pchromosome CDS316979 651 + 0.450077
NA SYN_01282 23S rRNA Gm2251 methyltransferasechromosome CDS291368 750 + 0.565333
NA SYN_02888 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS2026727 936 - 0.575855
NA SYN_00990 LSU ribosomal protein L22Pchromosome CDS316628 333 + 0.414414
NA SYN_00765 SSU ribosomal protein S16Pchromosome CDS2377977 252 - 0.452381
NA SYN_01783 tRNA pseudouridine synthase Bchromosome CDS2695069 939 - 0.578275
NA SYN_02604 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Bchromosome CDS462933 1437 + 0.609603
NA SYN_00069 LSU ribosomal protein L11chromosome CDS300242 435 + 0.498851
NA SYN_01395 tRNA pseudouridine synthase Achromosome CDS2041889 780 - 0.533333
NA SYN_00039 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS2257507 1089 + 0.5427
NA SYN_02603 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Achromosome CDS461569 1362 + 0.619677
NA SYN_02443 sua5/yciO/yrdC/ywlC family proteinchromosome CDS725951 654 - 0.525994
NA SYN_02856 RNA pseudouridylate synthase S4 domainchromosome CDS1333300 756 + 0.587302
NA SYN_01129 mannose-1-phosphate guanyltransferasechromosome CDS398540 723 + 0.57953
NA SYN_03311 ribosomal protein S12chromosome CDS311397 135 + 0.525926
NA SYN_01273 tRNA 2-methylthioadenine synthetase-like proteinchromosome CDS283392 1362 - 0.599119
NA SYN_00905 prolyl-tRNA synthetasechromosome CDS1651552 1794 + 0.515608
NA SYN_01719 LSU ribosomal protein L35Pchromosome CDS655541 198 + 0.469697
NA SYN_02602 aspartyl-tRNA synthetasechromosome CDS459534 2172 + 0.619705
NA SYN_00075 cysteinyl-tRNA synthetasechromosome CDS294520 2310 + 0.514286
NA SYN_00767 16S rRNA processing proteinchromosome CDS2377029 501 - 0.447106
NA SYN_01012 ribonuclease P protein componentchromosome CDS1167438 360 - 0.402778
NA SYN_00310 methylthioribose salvage proteinchromosome CDS2972166 1104 - 0.605072
NA SYN_00232 LSU ribosomal protein L13Pchromosome CDS333783 429 + 0.505827
NA SYN_00986 LSU ribosomal protein L4chromosome CDS314511 654 + 0.437309
NA SYN_02374 leucyl-tRNA synthetasechromosome CDS188856 2589 - 0.557744
NA SYN_00072 LSU ribosomal protein L33Pchromosome CDS299162 150 + 0.446667
NA SYN_01803 peptide deformylasechromosome CDS2714698 570 + 0.519298
NA SYN_01590 LSU ribosomal protein L6Pchromosome CDS320600 540 + 0.433333
NA SYN_01023 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferasechromosome CDS1156677 1290 + 0.543411
NA SYN_03255 SSU ribosomal protein S7Pchromosome CDS311541 477 + 0.457023
NA SYN_03026 cysteinyl-tRNA synthetasechromosome CDS335988 1653 + 0.517241
NA SYN_02769 peptidyl-tRNA hydrolasechromosome CDS1961192 591 + 0.50423
NA SYN_01574 protein translation elongation factor G (EF-G)chromosome CDS1477836 2088 + 0.526341
NA SYN_02903 sugar-phosphate nucleotidyltransferasechromosome CDS825381 828 - 0.574879
NA SYN_00985 LSU ribosomal protein L3Pchromosome CDS313858 657 + 0.473364
NA SYN_01444 23S rRNA methyltransferasechromosome CDS263947 819 + 0.590965
NA SYN_01780 polyribonucleotide nucleotidyltransferasechromosome CDS2692330 2118 - 0.559962
NA SYN_00994 arginyl-tRNA synthetasechromosome CDS2380925 1689 - 0.513322
NA SYN_00993 LSU ribosomal protein L29Pchromosome CDS318103 198 + 0.434343
NA SYN_02707 methionyl-tRNA formyltransferasechromosome CDS988025 939 - 0.561235
NA SYN_00770 LSU ribosomal protein L19Pchromosome CDS2375260 348 - 0.505747
NA SYN_00184 truncated lysyl-tRNA synthetasechromosome CDS895474 999 + 0.568569
NA SYN_00984 SSU ribosomal protein S10Pchromosome CDS313449 330 + 0.454545
NA SYN_01298 superfamily II DNA and RNA helicaseschromosome CDS3116599 1719 + 0.535777
NA SYN_03313 LSU ribosomal protein L24Pchromosome CDS319028 321 + 0.4081
NA SYN_02116 glutaminyl-tRNA synthetasechromosome CDS1084271 1689 - 0.531083
NA SYN_01536 glycyl-tRNA synthetase alpha chainchromosome CDS2272111 879 + 0.551763
NA SYN_00038 queuine tRNA-ribosyltransferasechromosome CDS2258633 1131 + 0.543767
NA SYN_01785 ribosome-binding factor Achromosome CDS2696946 372 - 0.537634
NA SYN_01419 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / fibronectin/fibrinogen-binding proteinchromosome CDS1991598 1002 + 0.525948
NA SYN_00989 SSU ribosomal protein S19Pchromosome CDS316294 282 + 0.386525
NA SYN_01600 SSU ribosomal protein S4Pchromosome CDS326296 630 + 0.442857
NA SYN_00768 tRNA (Guanine-N(1)-)-methyltransferasechromosome CDS2376264 753 - 0.498008
NA SYN_00992 LSU ribosomal protein L16Pchromosome CDS317691 423 + 0.470449
NA SYN_01929 ATP-dependent RNA helicasechromosome CDS1879588 1242 - 0.52818
NA SYN_00102 seryl-tRNA synthetasechromosome CDS1816704 1347 + 0.491462
NA SYN_00798 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2345709 1029 + 0.559767
NA SYN_00983 protein translation Elongation Factor Tu (EF-TU)chromosome CDS312244 1194 + 0.497487
NA SYN_00067 LSU ribosomal protein L10chromosome CDS301793 525 + 0.499048
NA SYN_02790 bacterial peptide Chain Release Factor 2 (RF-2)chromosome CDS1587973 840 + 0.453571
NA SYN_02708 16S rRNA m(5)C 967 methyltransferasechromosome CDS986665 1416 - 0.548023
NA SYN_01537 glycyl-tRNA synthetase beta chainchromosome CDS2273066 2073 + 0.53835
NA SYN_00924 lysyl-tRNA synthetasechromosome CDS2306626 1629 - 0.529773
NA SYN_02857 tryptophanyl-tRNA synthetasechromosome CDS1332129 1026 + 0.562378
NA SYN_02930 protein translation elongation factor Gchromosome CDS1621250 2076 - 0.515896
NA SYN_00885 ribosomal protein L28chromosome CDS1675601 198 + 0.434343
NA SYN_02430 ATP-dependent RNA helicasechromosome CDS2870357 1272 + 0.527516
NA SYN_02768 LSU ribosomal protein L25Pchromosome CDS1960536 603 + 0.482587
NA SYN_00068 LSU ribosomal protein L1Pchromosome CDS300805 699 + 0.494993
NA SYN_00164 tRNA-specific adenosine deaminasechromosome CDS78720 564 + 0.553191
NA SYN_03316 SSU ribosomal protein S8Pchromosome CDS320150 402 + 0.420398
NA SYN_03254 SSU ribosomal protein S12Pchromosome CDS311162 189 + 0.507937
NA SYN_00848 bacterial peptide Chain Release Factor 3 (RF-3)chromosome CDS2533651 1590 + 0.577987
NA SYN_00919 ribosome recycling factorchromosome CDS1638315 558 + 0.433692
NA SYN_02277 ribosomal protein L11 methyltransferasechromosome CDS564431 960 - 0.540625
NA SYN_00581 peptide chain release factorchromosome CDS2392998 411 + 0.542579
NA SYN_01718 translation initiation factor 3 (IF-3)chromosome CDS654872 546 + 0.474359
NA SYN_02014 hypothetical cytosolic proteinchromosome CDS1832659 2481 + 0.457074
NA SYN_01596 methionine aminopeptidasechromosome CDS324088 750 + 0.428
NA SYN_02977 tyrosyl-tRNA synthetasechromosome CDS736415 1287 + 0.420357
NA SYN_02191 Selenocysteine-specific protein translation Elongation Factorchromosome CDS1804118 1911 + 0.530612
NA SYN_01796 LSU ribosomal protein L31Pchromosome CDS2707680 216 - 0.458333
NA SYN_00178 superfamily II DNA and RNA helicaseschromosome CDS64776 1578 + 0.579214
NA SYN_01352 LSU ribosomal protein L27Pchromosome CDS713830 258 - 0.5
NA SYN_03257 LSU ribosomal protein L14Pchromosome CDS318538 423 + 0.465721
NA SYN_00307 aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit Cchromosome CDS2976270 288 - 0.520833
NA SYN_02363 LSU ribosomal protein L32Pchromosome CDS199378 186 - 0.516129
NA SYN_03197 SSU ribosomal protein S1Pchromosome CDS1270708 1761 + 0.457695
NA SYN_02701 tRNA pseudouridine synthase Achromosome CDS2591342 987 + 0.614995
NA SYN_01599 SSU ribosomal protein S11Pchromosome CDS325816 393 + 0.455471
NA SYN_02534 histidyl-tRNA synthetasechromosome CDS1513355 1281 - 0.522248
NA SYN_00899 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS1659062 450 + 0.446667
NA SYN_00987 LSU ribosomal protein L23Pchromosome CDS315161 291 + 0.402062
NA SYN_01594 LSU ribosomal protein L15Pchromosome CDS322305 444 + 0.472973
NA SYN_01767 SSU ribosomal protein S21Pchromosome CDS2681816 192 - 0.453125
NA SYN_02149 tRNA 2-methylthioadenosine synthasechromosome CDS1452986 1386 + 0.44228
NA SYN_01814 translation initiation inhibitorchromosome CDS2725210 390 + 0.561538
NA SYN_00558 methionyl-tRNA synthetase / protein secretion chaperoninchromosome CDS1868414 1935 + 0.521964
NA SYN_02196 ribonuclease Echromosome CDS1811486 1893 + 0.494981
NA SYN_00066 LSU ribosomal protein L7/L12chromosome CDS302330 423 + 0.50591
NA SYN_02026 alanyl-tRNA synthetasechromosome CDS338234 2637 - 0.565415
NA SYN_00309 aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit Bchromosome CDS2973296 1431 - 0.580713
NA SYN_02557 glutamyl glutaminyl-tRNA synthetasechromosome CDS200427 1419 + 0.55673
NA SYN_00797 tRNA 2-methylthioadenosine synthase-like proteinchromosome CDS2346685 1356 + 0.580383
NA SYN_03315 SSU ribosomal protein S14Pchromosome CDS319939 186 + 0.424731
NA SYN_01800 ribosomal large subunit pseudouridine synthase Dchromosome CDS2710676 1002 - 0.585828
NA SYN_00183 protein translation Elongation Factor P (EF-P)chromosome CDS894901 564 + 0.503546
NA SYN_02055 rRNA methylase, spoU familychromosome CDS3175871 792 - 0.541667
NA SYN_01723 phenylalanyl-tRNA synthetase beta chainchromosome CDS657491 2415 + 0.508075
NA SYN_02195 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS1810693 609 + 0.45156
NA SYN_00995 cell division proteinchromosome CDS2379790 1104 - 0.502717
NA SYN_01598 SSU ribosomal protein S13Pchromosome CDS325405 369 + 0.422764
NA SYN_02461 deoxyhypusine synthasechromosome CDS1855891 1176 - 0.557823
NA SYN_01597 bacterial protein translation Initiation Factor 1 (IF-1)chromosome CDS324959 219 + 0.415525
NA SYN_01256 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2511282 1119 - 0.550492
NA SYN_00730 ribosomal large subunit pseudouridine synthase Dchromosome CDS2215218 975 - 0.453333
NA SYN_01720 LSU ribosomal protein L20Pchromosome CDS655889 360 + 0.5
NA SYN_00427 ATP-dependent DNA helicasechromosome CDS699671 2103 + 0.521636
NA SYN_02376 SSU ribosomal protein S20chromosome CDS187885 270 + 0.514815
NA SYN_02700 ribonuclease Dchromosome CDS2592451 1020 - 0.567647
NA SYN_01032 ribosomal protein S2chromosome CDS1636069 834 + 0.473621
NA SYN_00644 SSU ribosomal protein S6Pchromosome CDS1949669 522 + 0.532567
NA SYN_01591 LSU ribosomal protein L18Pchromosome CDS321192 366 + 0.404372
NA SYN_00421 dimethyladenosine transferasechromosome CDS1254476 843 + 0.465006
NA SYN_02455 rRNA methylasechromosome CDS1861745 834 + 0.577938
NA SYN_01787 bacterial protein translation Initiation Factor 2 (IF-2)chromosome CDS2697765 2775 - 0.548108
NA SYN_03145 translation elongation factor Tschromosome CDS1636927 606 + 0.443894
NA SYN_01593 LSU ribosomal protein L30Pchromosome CDS322111 195 + 0.435897
NA SYN_00752 hypothetical RNA binding proteinchromosome CDS2237002 327 - 0.452599
NA SYN_03256 SSU ribosomal protein S17Pchromosome CDS318297 258 + 0.418605
NA SYN_01782 SSU ribosomal protein S15Pchromosome CDS2694741 267 - 0.449438
NA SYN_01353 LSU ribosomal protein L21Pchromosome CDS714100 318 - 0.45283
NA SYN_02535 aspartyl-tRNA synthetasechromosome CDS1511574 1776 - 0.538288
NA SYN_00533 tRNA nucleotidyltransferasechromosome CDS643544 2628 + 0.541096
NA SYN_00988 LSU ribosomal protein L2Pchromosome CDS315469 822 + 0.463504
NA SYN_01399 glutamyl-tRNA synthetasechromosome CDS2046082 1461 - 0.523614