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2024-05-06 06:08:41

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Porphyromonas gingivalis W83, W83

Number of genes found: 141

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Porphyromonas gingivalis W83, W83
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PG1625 hypothetical proteinchromosome CDS1707576 1203 + 0.475478
NA PG0738 cytidine/deoxycytidylate deaminase family proteinchromosome CDS786603 453 + 0.567329
NA PG0840 hypothetical proteinchromosome CDS898512 4032 + 0.384673
NA PG1903 conserved hypothetical proteinchromosome CDS2002320 1992 - 0.520582
NA PG1365 16S rRNA processing protein RimM, putativechromosome CDS1445632 528 - 0.471591
NA PG1690 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS1775261 603 - 0.545605
NA PG0048 conserved hypothetical protein TIGR00092chromosome CDS59544 1104 - 0.497283
NA PG1481 conjugative transposon protein TraGchromosome CDS1556012 2526 - 0.537213
NA PG2152 DNA-binding protein, histone-like familychromosome CDS2259890 486 + 0.547325
NA PG1254 acetyltransferase, GNAT familychromosome CDS1331684 528 - 0.482955
NA PG0969 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putativechromosome CDS1028291 1218 - 0.519704
NA PG2099 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS2206739 1284 - 0.560748
NA PG0801 polyA polymerase family proteinchromosome CDS856353 1452 - 0.492424
NA PG0286 hypothetical proteinchromosome CDS320257 258 + 0.406977
NA PG0933 translation elongation factor G, putativechromosome CDS990137 2160 + 0.522685
NA PG1728 cytidine/deoxycytidylate deaminase family proteinchromosome CDS1817784 453 + 0.490066
NA PG0241 lipoprotein, putativechromosome CDS277450 855 - 0.472515
NA PG2221 MiaB-like tRNA modifying enzymechromosome CDS2335566 1335 + 0.540824
NA PG1012 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS1070179 1392 - 0.545259
NA PG1847 endoribonuclease L-PSP, putativechromosome CDS1946317 381 - 0.472441
NA PG0086 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS100635 1815 - 0.50303
NA PG1596 isoleucyl-tRNA synthetase, putativechromosome CDS1674683 3414 + 0.52812
NA PG2101 hypothetical proteinchromosome CDS2210368 996 - 0.517068
NA PG1507 hypothetical proteinchromosome CDS1583760 2430 + 0.462551
NA PG1963 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS2052478 576 + 0.572917
NA PG1492 hypothetical proteinchromosome CDS1566190 717 + 0.365411
NA PG0150 conserved hypothetical protein TIGR01125chromosome CDS172330 1305 - 0.550192
NA PG0021 TIM-barrel protein, putative, NifR3 familychromosome CDS24212 1002 - 0.52994
NA PG0495 hypothetical proteinchromosome CDS535587 1410 + 0.424113
NA PG1848 RNA methyltransferase, TrmH familychromosome CDS1946723 750 - 0.517333
NA PG0365 3'-5' exonuclease domain proteinchromosome CDS399702 567 - 0.571429
NA PG0744 RNA methyltransferase, TrmH familychromosome CDS791223 765 - 0.554248
NA PG1358 acetyltransferase, GNAT familychromosome CDS1436743 681 - 0.424376
NA PG0248 translation initation factor SUI1, putativechromosome CDS281600 333 - 0.522523
NA PG0386 site-specific recombinase, phage integrase family/ribosomal subunit interface proteinchromosome CDS419187 1203 + 0.465503
NA PG0156 modification methylase, HemK familychromosome CDS178968 882 + 0.531746
NA PG1156 S4 domain proteinchromosome CDS1236875 453 + 0.461369
NA PG1745 phosphoribulokinase family proteinchromosome CDS1829525 1590 - 0.496226
NA PG1256 ribonuclease, Rne/Rng familychromosome CDS1332838 1515 - 0.493069
NA PG0853 DNA-binding protein, histone-like familychromosome CDS914524 486 + 0.547325
NA PG1095 RNA methyltransferase, TrmA familychromosome CDS1160365 1398 + 0.537196
alaS PG1246 alanyl-tRNA synthetasechromosome CDS1321939 2631 + 0.527176
ansA PG2121 L-asparaginasechromosome CDS2228635 1080 - 0.498148
argS PG0267 arginyl-tRNA synthetasechromosome CDS299240 1794 + 0.48495
asnS PG1121 asparaginyl-tRNA synthetasechromosome CDS1196236 1410 - 0.48156
aspS PG0153 aspartyl-tRNA synthetasechromosome CDS175757 1764 - 0.57483
cysS PG1878 cysteinyl-tRNA synthetasechromosome CDS1973068 1473 + 0.513917
def PG2201 polypeptide deformylasechromosome CDS2308933 570 - 0.52807
dtd PG1994 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS2085267 453 + 0.494481
efp-1 PG0568 translation elongation factor Pchromosome CDS624089 567 - 0.537919
efp-2 PG1274 translation elongation factor Pchromosome CDS1351983 567 + 0.54321
fmt PG2023 methionyl-tRNA formyltransferasechromosome CDS2117655 972 - 0.501029
frr PG1901 ribosome recycling factorchromosome CDS2000921 522 - 0.538314
fusA PG1940 translation elongation factor Gchromosome CDS2025187 2124 - 0.521186
glnS PG1951 glutaminyl-tRNA synthetasechromosome CDS2041282 1701 + 0.52087
gltX PG1566 glutamyl-tRNA synthetasechromosome CDS1645974 1518 - 0.522398
glyS PG2165 glycyl-tRNA synthetasechromosome CDS2270212 1548 - 0.505814
hisS PG2062 histidyl-tRNA synthetasechromosome CDS2159111 1365 + 0.536264
hslR PG0165 heat shock protein 15chromosome CDS187460 438 - 0.527397
infA PG1916 translation initiation factor IF-1chromosome CDS2013574 219 - 0.401826
infB PG0255 translation initiation factor IF-2chromosome CDS286682 2940 + 0.522109
infC PG0991 translation initiation factor IF-3chromosome CDS1051524 606 - 0.450495
ksgA PG0135 dimethyladenosine transferasechromosome CDS157257 777 - 0.516088
leuS PG0796 leucyl-tRNA synthetasechromosome CDS849763 2778 - 0.492801
lysS PG1370 lysyl-tRNA synthetasechromosome CDS1450583 1737 - 0.501439
map PG1917 methionine aminopeptidase, type Ichromosome CDS2013795 786 - 0.451654
miaA-1 PG0335 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS369894 903 - 0.554817
miaA-2 PG0522 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS566083 909 - 0.536854
pheS PG1771 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS1858178 1023 + 0.518084
pnpA PG0766 polyribonucleotide nucleotidyltransferasechromosome CDS816264 2232 - 0.540771
prfA PG0074 peptide chain release factor 1chromosome CDS88177 1086 - 0.546961
prfC PG0205 peptide chain release factor 3chromosome CDS240603 1581 - 0.516129
prmA PG0635 ribosomal protein L11 methyltransferasechromosome CDS686928 936 - 0.494658
proS PG0962 prolyl-tRNA synthetasechromosome CDS1022417 1482 - 0.492578
pth PG0166 peptidyl-tRNA hydrolasechromosome CDS187903 558 - 0.537634
queA PG1540 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1619417 1053 + 0.482431
rbfA PG0923 ribosome-binding factor Achromosome CDS982569 336 - 0.458333
rplA PG0391 ribosomal protein L1chromosome CDS423420 699 + 0.433476
rplB PG1935 ribosomal protein L2chromosome CDS2022458 825 - 0.511515
rplC PG1938 ribosomal protein L3chromosome CDS2024226 618 - 0.487055
rplD PG1937 ribosomal protein L4chromosome CDS2023597 630 - 0.480952
rplE PG1926 ribosomal protein L5chromosome CDS2018767 561 - 0.431373
rplF PG1923 ribosomal protein L6chromosome CDS2017480 552 - 0.451087
rplI PG0597 ribosomal protein L9chromosome CDS653802 540 + 0.477778
rplJ PG0392 ribosomal protein L10chromosome CDS424134 525 + 0.438095
rplK PG0390 ribosomal protein L11chromosome CDS422962 438 + 0.440639
rplL PG0393 ribosomal protein L7/L12chromosome CDS424700 378 + 0.47619
rplM PG0375 ribosomal protein L13chromosome CDS406074 456 + 0.495614
rplN PG1928 ribosomal protein L14chromosome CDS2019670 366 - 0.47541
rplO PG1919 ribosomal protein L15chromosome CDS2015925 447 - 0.438479
rplP PG1931 ribosomal protein L16chromosome CDS2020505 435 - 0.457471
rplQ PG1910 ribosomal protein L17chromosome CDS2010372 483 - 0.455487
rplR PG1922 ribosomal protein L18chromosome CDS2017117 345 - 0.431884
rplS PG0037 ribosomal protein L19chromosome CDS46659 366 + 0.448087
rplT PG0989 ribosomal protein L20chromosome CDS1050789 348 - 0.45977
rplU PG0314 ribosomal protein L21chromosome CDS347830 363 + 0.46281
rplV PG1933 ribosomal protein L22chromosome CDS2021707 351 - 0.490029
rplW PG1936 ribosomal protein L23chromosome CDS2023289 294 - 0.421769
rplX PG1927 ribosomal protein L24chromosome CDS2019327 321 - 0.429907
rplY PG0167 ribosomal protein L25chromosome CDS188602 579 - 0.518135
rpmA PG0315 ribosomal protein L27chromosome CDS348220 258 + 0.465116
rpmB PG1960 ribosomal protein L28chromosome CDS2048514 240 - 0.475
rpmC PG1930 ribosomal protein L29chromosome CDS2020305 195 - 0.45641
rpmD PG1920 ribosomal protein L30chromosome CDS2016397 177 - 0.378531
rpmE PG0592 ribosomal protein L31chromosome CDS650028 258 + 0.468992
rpmF PG2140 ribosomal protein L32chromosome CDS2246274 186 + 0.473118
rpmG PG1959 ribosomal protein L33chromosome CDS2048307 189 - 0.433862
rpmH PG0656 ribosomal protein L34chromosome CDS707035 153 - 0.503268
rpmI PG0990 ribosomal protein L35chromosome CDS1051249 198 - 0.429293
rpmJ PG1915 ribosomal protein L36chromosome CDS2013441 117 - 0.393162
rpsA PG1297 ribosomal protein S1chromosome CDS1375971 1800 + 0.489444
rpsB PG0377 ribosomal protein S2chromosome CDS407060 846 + 0.518913
rpsC PG1932 ribosomal protein S3chromosome CDS2020960 741 - 0.497976
rpsD PG1912 ribosomal protein S4chromosome CDS2011865 606 - 0.460396
rpsE PG1921 ribosomal protein S5chromosome CDS2016593 519 - 0.468208
rpsF PG0595 ribosomal protein S6chromosome CDS653148 354 + 0.483051
rpsG PG1941 ribosomal protein S7chromosome CDS2027323 477 - 0.480084
rpsH PG1924 ribosomal protein S8chromosome CDS2018050 396 - 0.424242
rpsI PG0376 ribosomal protein S9chromosome CDS406539 387 + 0.501292
rpsJ PG1939 ribosomal protein S10chromosome CDS2024866 306 - 0.454248
rpsK PG1913 ribosomal protein S11chromosome CDS2012630 387 - 0.447028
rpsL PG1942 ribosomal protein S12chromosome CDS2028036 405 - 0.548148
rpsM PG1914 ribosomal protein S13chromosome CDS2013028 381 - 0.451444
rpsN PG1925 ribosomal protein S14chromosome CDS2018496 270 - 0.477778
rpsO PG1758 ribosomal protein S15chromosome CDS1845325 270 + 0.462963
rpsP PG2117 ribosomal protein S16chromosome CDS2225325 579 - 0.500864
rpsQ PG1929 ribosomal protein S17chromosome CDS2020037 255 - 0.4
rpsR PG0596 ribosomal protein S18chromosome CDS653505 273 + 0.483516
rpsS PG1934 ribosomal protein S19chromosome CDS2022166 270 - 0.444444
rpsT PG1723 ribosomal protein S20chromosome CDS1813209 255 + 0.466667
rpsU PG0385 ribosomal protein S21chromosome CDS418919 192 + 0.463542
serS PG0316 seryl-tRNA synthetasechromosome CDS348577 1272 + 0.545597
tgt PG0500 queuine tRNA-ribosyltransferasechromosome CDS539337 1131 + 0.547303
thrS PG0992 threonyl-tRNA synthetasechromosome CDS1052233 1962 - 0.474006
trmD PG2035 tRNA (guanine-N1)-methyltransferasechromosome CDS2135992 678 + 0.522124
trmU PG0268 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS301038 1086 + 0.478821
trpS PG2085 tryptophanyl-tRNA synthetasechromosome CDS2185672 984 + 0.490854
tsf PG0378 translation elongation factor Tschromosome CDS408044 825 + 0.521212
tuf PG0387 translation elongation factor Tuchromosome CDS420783 1188 + 0.492424
tyrS PG0263 tyrosyl-tRNA synthetasechromosome CDS295803 1293 + 0.524362
valS PG1132 valyl-tRNA synthetasechromosome CDS1211052 2631 + 0.541619