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2024-04-27 11:44:14

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13)

Number of genes found: 142

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. JA-2-3Ba(2-13), JA-2-3Ba(2-13)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CYB_2783 RNA methyltransferase, TrmH family, group 1chromosome CDS2879809 831 - 0.612515
NA CYB_1840 conserved domain proteinchromosome CDS1927300 402 - 0.584577
NA CYB_1705 2',5' RNA ligase family proteinchromosome CDS1789719 561 - 0.593583
NA CYB_2829 RNA methyltransferase, TrmH family, group 3chromosome CDS2929069 1137 + 0.586631
NA CYB_0612 conserved hypothetical proteinchromosome CDS622509 588 - 0.595238
NA CYB_0635 cytidine and deoxycytidylate deaminase family proteinchromosome CDS646125 516 - 0.658915
NA CYB_1073 hemolysin Achromosome CDS1110359 828 - 0.599034
NA CYB_0847 putative ribosomal protein S1chromosome CDS880480 915 - 0.571585
NA CYB_1030 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS1073024 1092 + 0.645604
NA CYB_2037 MiaB-like tRNA modifying enzyme YliG, TIGR01125chromosome CDS2138247 1485 + 0.608081
NA CYB_1632 dihydrouridine synthase family proteinchromosome CDS1702789 1086 - 0.600368
NA CYB_0196 RNA pseudouridine synthase family proteinchromosome CDS209503 825 - 0.613333
NA CYB_1549 nucleotidyl transferase family proteinchromosome CDS1624023 1122 - 0.579323
NA CYB_0559 putative endoribonuclease L-PSPchromosome CDS569327 384 + 0.601562
NA CYB_1113 pseudouridine synthase, RluA familychromosome CDS1150124 954 - 0.632075
NA CYB_1823 ribonuclease, Rne/Rng familychromosome CDS1914255 2172 + 0.612799
NA CYB_1962 RNA methyltransferase, TrmH familychromosome CDS2058015 813 - 0.629766
NA CYB_2350 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS2457380 714 - 0.60084
NA CYB_0966 methyltransferase, HemK familychromosome CDS1002317 744 - 0.63172
NA CYB_0497 hypothetical proteinchromosome CDS508358 1089 + 0.514233
NA CYB_2924 GTP-binding protein YchFchromosome CDS3021852 1092 - 0.607143
NA CYB_2123 nucleotidyl transferase family proteinchromosome CDS2215664 948 - 0.591772
NA CYB_0753 hypothetical proteinchromosome CDS776569 276 + 0.539855
NA CYB_1483 conserved hypothetical proteinchromosome CDS1559947 885 + 0.59661
NA CYB_2659 amidohydrolase, AtzE familychromosome CDS2747957 1401 - 0.642398
NA CYB_0739 metallo-beta-lactamase family proteinchromosome CDS762417 1788 - 0.629754
NA CYB_0078 RNA pseudouridine synthase family proteinchromosome CDS90876 681 + 0.581498
NA CYB_1134 conserved hypothetical proteinchromosome CDS1170896 567 - 0.578483
NA CYB_2855 polyA polymerase family proteinchromosome CDS2953377 1383 - 0.644252
NA CYB_1361 3'-5' exonuclease family proteinchromosome CDS1432669 633 - 0.587678
NA CYB_0261 RNA methyltransferase, TrmH family, group 2chromosome CDS276171 459 - 0.59695
NA CYB_2744 Piwi domain proteinchromosome CDS2838369 2241 + 0.452923
alaS CYB_1521 alanyl-tRNA synthetasechromosome CDS1598112 2655 - 0.615066
argS CYB_1944 arginyl-tRNA synthetasechromosome CDS2036152 1797 + 0.581525
aspS CYB_1161 aspartyl-tRNA synthetasechromosome CDS1199191 1806 - 0.614064
cysS CYB_1821 cysteinyl-tRNA synthetasechromosome CDS1909095 1578 + 0.559569
def-1 CYB_2132 peptide deformylasechromosome CDS2226600 525 + 0.6
def-2 CYB_2769 peptide deformylasechromosome CDS2867669 591 - 0.593909
efp CYB_0435 translation elongation factor Pchromosome CDS445854 558 + 0.544803
fmt CYB_1993 methionyl-tRNA formyltransferasechromosome CDS2098812 969 + 0.609907
frr CYB_2897 ribosome recycling factorchromosome CDS2995100 549 + 0.579235
fusA CYB_0920 translation elongation factor Gchromosome CDS956750 2124 + 0.580979
gatA CYB_1605 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS1676295 1533 + 0.631442
gatB CYB_0708 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS724745 1473 - 0.592668
gatC CYB_2217 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS2324650 294 + 0.571429
gid CYB_0051 gid proteinchromosome CDS64391 1380 + 0.618841
gltX CYB_1680 glutamyl-tRNA synthetasechromosome CDS1756309 1440 - 0.603472
glyQ CYB_0066 glycyl-tRNA synthetase, alpha subunitchromosome CDS78035 987 - 0.554205
glyS CYB_2517 glycyl-tRNA synthetase, beta subunitchromosome CDS2613613 2193 + 0.626539
gshB CYB_1049 glutathione synthasechromosome CDS1088232 948 - 0.561181
hisS CYB_0694 histidyl-tRNA synthetasechromosome CDS711908 1299 - 0.625866
ileS CYB_1022 isoleucyl-tRNA synthetasechromosome CDS1061684 2829 - 0.597384
infA CYB_2618 translation initiation factor IF-1chromosome CDS2711790 225 + 0.528889
infB CYB_1127 translation initiation factor IF-2chromosome CDS1163984 3165 - 0.6297
infC CYB_0524 translation initiation factor IF-3chromosome CDS539421 558 - 0.571685
ksgA CYB_0986 dimethyladenosine transferasechromosome CDS1021057 849 - 0.63722
leuS CYB_2881 leucyl-tRNA synthetasechromosome CDS2979666 2649 - 0.618347
lysS CYB_1514 lysyl-tRNA synthetasechromosome CDS1587285 1536 + 0.628906
map-1 CYB_2149 methionine aminopeptidase, type Ichromosome CDS2249862 789 + 0.603295
map-2 CYB_2617 methionine aminopeptidase, type Ichromosome CDS2710886 774 + 0.595607
metG CYB_2229 methionyl-tRNA synthetasechromosome CDS2335086 1557 - 0.598587
miaA CYB_2044 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS2146323 1065 - 0.626291
miaB CYB_1683 tRNA-i(6)A37 thiotransferase enzyme MiaBchromosome CDS1758620 1335 - 0.619476
miaE CYB_1409 tRNA-(MS[2]IO[6]A)-hydroxylasechromosome CDS1477421 582 + 0.606529
pheS CYB_0735 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS759278 1002 + 0.588822
pnpA CYB_1445 polyribonucleotide nucleotidyltransferasechromosome CDS1514303 2139 + 0.605423
prfA CYB_1586 peptide chain release factor 1chromosome CDS1656499 1083 + 0.602955
prfC CYB_1875 peptide chain release factor 3chromosome CDS1959185 1626 - 0.52091
prmA CYB_0696 ribosomal protein L11 methyltransferasechromosome CDS714107 942 - 0.624204
proS CYB_1126 prolyl-tRNA synthetasechromosome CDS1162028 1830 - 0.606011
pth CYB_0725 peptidyl-tRNA hydrolasechromosome CDS744475 675 - 0.595556
queA CYB_1668 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1747081 1179 - 0.62341
rbfA CYB_0200 ribosome-binding factor Achromosome CDS212012 435 - 0.583908
rimM CYB_0323 16S rRNA processing protein RimMchromosome CDS339946 540 - 0.622222
rnpA CYB_2941 ribonuclease Pchromosome CDS3045885 402 - 0.594527
rph CYB_1741 ribonuclease PHchromosome CDS1823994 735 - 0.591837
rplA CYB_1222 ribosomal protein L1chromosome CDS1265312 711 + 0.586498
rplB CYB_2600 ribosomal protein L2chromosome CDS2701486 885 + 0.635028
rplC CYB_2597 ribosomal protein L3chromosome CDS2699499 645 + 0.624806
rplD CYB_2598 ribosomal protein L4chromosome CDS2700194 951 + 0.61409
rplE CYB_2609 ribosomal protein L5chromosome CDS2705792 543 + 0.558011
rplF CYB_2611 ribosomal protein L6chromosome CDS2706825 546 + 0.580586
rplI CYB_1080 ribosomal protein L9chromosome CDS1115958 450 + 0.555556
rplJ CYB_1223 ribosomal protein L10chromosome CDS1266321 564 + 0.597518
rplK CYB_1221 ribosomal protein L11chromosome CDS1264780 426 + 0.589202
rplL CYB_1224 ribosomal protein L7/L12chromosome CDS1266950 411 + 0.583942
rplM CYB_1583 ribosomal protein L13chromosome CDS1655281 456 + 0.592105
rplN CYB_2607 ribosomal protein L14chromosome CDS2704957 369 + 0.569106
rplO CYB_2614 ribosomal protein L15chromosome CDS2708363 453 + 0.633554
rplP CYB_2604 ribosomal protein L16chromosome CDS2704007 468 + 0.598291
rplQ CYB_1581 ribosomal protein L17chromosome CDS1654014 351 + 0.663818
rplR CYB_2612 ribosomal protein L18chromosome CDS2707402 369 + 0.588076
rplS CYB_2889 ribosomal protein L19chromosome CDS2987533 378 - 0.587302
rplT CYB_2849 ribosomal protein L20chromosome CDS2945347 357 + 0.596639
rplU CYB_0742 ribosomal protein L21chromosome CDS766524 426 - 0.570423
rplV CYB_2602 ribosomal protein L22chromosome CDS2702764 375 + 0.616
rplW CYB_2599 ribosomal protein L23chromosome CDS2701137 300 + 0.606667
rplX CYB_2608 ribosomal protein L24chromosome CDS2705325 399 + 0.551378
rpmA CYB_0741 ribosomal protein L27chromosome CDS766178 270 - 0.603704
rpmB CYB_1051 ribosomal protein L28chromosome CDS1090200 237 - 0.565401
rpmC CYB_2605 ribosomal protein L29chromosome CDS2704488 222 + 0.563063
rpmE CYB_1585 ribosomal protein L31chromosome CDS1656220 225 + 0.551111
rpmG CYB_1634 ribosomal protein L33chromosome CDS1704136 195 - 0.553846
rpmH CYB_2942 ribosomal protein L34chromosome CDS3046380 141 - 0.617021
rpmI CYB_2848 ribosomal protein L35chromosome CDS2945013 201 + 0.597015
rpmJ CYB_1577 ribosomal protein L36chromosome CDS1651588 117 + 0.606838
rpsA CYB_2353 ribosomal protein S1chromosome CDS2459786 969 + 0.579979
rpsB CYB_1534 ribosomal protein S2chromosome CDS1609362 795 + 0.569811
rpsC CYB_2603 ribosomal protein S3chromosome CDS2703181 771 + 0.605707
rpsD CYB_1094 ribosomal protein S4chromosome CDS1128616 612 - 0.558824
rpsE CYB_2613 ribosomal protein S5chromosome CDS2707789 537 + 0.608939
rpsF CYB_1664 ribosomal protein S6chromosome CDS1743827 291 - 0.549828
rpsG CYB_0919 ribosomal protein S7chromosome CDS956127 471 + 0.617834
rpsH CYB_2610 ribosomal protein S8chromosome CDS2706381 411 + 0.596107
rpsI CYB_1584 ribosomal protein S9chromosome CDS1655733 411 + 0.622871
rpsJ CYB_0922 ribosomal protein S10chromosome CDS960259 318 + 0.559748
rpsK CYB_1579 ribosomal protein S11chromosome CDS1652374 387 + 0.589147
rpsL CYB_0918 ribosomal protein S12chromosome CDS955636 408 + 0.607843
rpsM CYB_1578 ribosomal protein S13chromosome CDS1651906 384 + 0.622396
rpsN CYB_1362 ribosomal protein S14chromosome CDS1433359 306 - 0.607843
rpsO CYB_0184 ribosomal protein S15chromosome CDS198055 276 - 0.557971
rpsP CYB_0448 ribosomal protein S16chromosome CDS455532 480 - 0.570833
rpsQ CYB_2606 ribosomal protein S17chromosome CDS2704709 252 + 0.515873
rpsR CYB_1633 ribosomal protein S18chromosome CDS1703891 216 - 0.569444
rpsS CYB_2601 ribosomal protein S19chromosome CDS2702437 282 + 0.56383
rpsT CYB_2798 ribosomal protein S20chromosome CDS2897084 330 - 0.545455
rpsU CYB_1229 ribosomal protein S21chromosome CDS1271496 186 - 0.553763
rumA CYB_0500 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS511015 1395 + 0.601434
serS CYB_1790 seryl-tRNA synthetasechromosome CDS1877968 1308 + 0.608563
sun CYB_1963 ribosomal RNA small subunit methyltransferase Bchromosome CDS2058908 1374 - 0.622999
tgt CYB_0511 queuine tRNA-ribosyltransferasechromosome CDS524190 1098 + 0.602914
thrS CYB_1492 threonyl-tRNA synthetasechromosome CDS1566888 1812 - 0.574503
trmD CYB_1217 tRNA (guanine-N1)-methyltransferasechromosome CDS1262530 756 + 0.617725
trmU CYB_1191 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1229529 1107 + 0.618789
trpS CYB_2214 tryptophanyl-tRNA synthetasechromosome CDS2322455 996 - 0.572289
truA CYB_1582 tRNA pseudouridine synthase Achromosome CDS1654378 858 + 0.655012
truB CYB_2212 tRNA pseudouridine synthase Bchromosome CDS2320416 900 - 0.633333
tsf CYB_1535 translation elongation factor Tschromosome CDS1610316 777 + 0.540541
tuf CYB_0921 translation elongation factor Tuchromosome CDS958905 1230 + 0.585366
tyrS CYB_2511 tyrosyl-tRNA synthetasechromosome CDS2604700 1242 - 0.613527
valS CYB_0301 valyl-tRNA synthetasechromosome CDS313555 2739 + 0.598028
yfiA CYB_2541 ribosomal subunit interface proteinchromosome CDS2646246 573 - 0.558464