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2024-05-19 13:28:11

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Neorickettsia sennetsu str. Miyayama, Miyayama

Number of genes found: 120

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Neorickettsia sennetsu str. Miyayama, Miyayama
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA NSE_0910 GTP-binding protein YchFRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS808080 1053 + 0.402659
NA NSE_0579 Sua5/YciO/YrdC/YwlC family proteinSubName: Full=Sua5/YciO/YrdC/YwlC family protein; chromosome CDS505364 588 - 0.392857
NA NSE_0128 modification methylase, HemK familySubName: Full=Modification methylase, HemK family; chromosome CDS105557 870 + 0.425287
NA NSE_0214 ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS181579 207 + 0.429952
NA NSE_0197 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS167307 399 - 0.41604
NA NSE_0306 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS249797 585 + 0.437607
NA NSE_0529 3'-5' exonuclease family proteinSubName: Full=3-5 exonuclease family protein; chromosome CDS455796 621 - 0.436393
NA NSE_0085 cytidine/deoxycytidylate deaminase family proteinSubName: Full=Cytidine/deoxycytidylate deaminase family protein; chromosome CDS73527 435 + 0.422989
NA NSE_0262 RNA methyltransferase, TrmH family, group 3SubName: Full=RNA methyltransferase, TrmH family, group 3; chromosome CDS223091 732 - 0.400273
NA NSE_0503 conserved hypothetical proteinRecName: Full=50S ribosomal protein L31; chromosome CDS424002 231 - 0.424242
NA NSE_0785 tRNA modification enzyme, MiaB familySubName: Full=tRNA modification enzyme, MiaB family; chromosome CDS697345 1290 - 0.409302
NA NSE_0321 ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS265024 309 + 0.381877
NA NSE_0646 polyA polymerase family proteinSubName: Full=PolyA polymerase family protein; chromosome CDS566524 1179 + 0.402884
NA NSE_0603 putative valyl-tRNA synthetaseSubName: Full=Putative valyl-tRNA synthetase; chromosome CDS524240 2634 - 0.409263
NA NSE_0124 putative 16S rRNA processing protein RimMRecName: Full=Ribosome maturation factor RimM; chromosome CDS101917 492 + 0.45935
NA NSE_0523 putative ribosome-binding factor ASubName: Full=Putative ribosome-binding factor A; chromosome CDS448388 294 + 0.384354
NA NSE_0120 ribonuclease, Rne/Rng familySubName: Full=Ribonuclease, Rne/Rng family; chromosome CDS97557 1650 + 0.408485
NA NSE_0343 ribosomal subunit interface proteinSubName: Full=Ribosomal subunit interface protein; chromosome CDS282179 561 + 0.365419
NA NSE_0365 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS296771 1125 + 0.370667
NA NSE_0373 putative tRNA-dihydrouridine synthaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS306962 996 - 0.403614
NA NSE_0138 putative RNA pseudouridylate synthase, truncationSubName: Full=Putative RNA pseudouridylate synthase, truncation; chromosome CDS112840 360 - 0.436111
NA NSE_0927 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS821998 135 - 0.407407
NA NSE_0038 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS29541 303 + 0.40264
NA NSE_0146 ribosomal large subunit pseudouridine synthases, RluA familySubName: Full=Ribosomal large subunit pseudouridine synthases, RluA family; chromosome CDS118090 993 + 0.431017
alaS NSE_0156 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS124722 2547 - 0.414605
argS NSE_0049 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS38541 1713 + 0.410975
aspS NSE_0477 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; chromosome CDS394279 1767 + 0.4103
cysS NSE_0333 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS271801 1524 + 0.41273
def NSE_0392 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS320139 561 + 0.442068
efp NSE_0196 translation elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS166629 576 - 0.421875
fmt NSE_0094 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS78013 924 - 0.405844
frr NSE_0945 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS833159 558 - 0.410394
fusA NSE_0687 translation elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS606585 2079 - 0.45695
gatA NSE_0256 glutamyl-tRNA(Gln) amidotransferase, A subunitRecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS217455 1449 + 0.432022
gatB NSE_0084 glutamyl-tRNA(Gln) amidotransferase, B subunitRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS72068 1467 + 0.430811
gltX-1 NSE_0518 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase 1; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 1; Short=GluRS 1; chromosome CDS441445 1302 - 0.384793
gltX-2 NSE_0737 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase 2; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 2; Short=GluRS 2; chromosome CDS656477 1230 - 0.401626
glyQ NSE_0757 glycyl-tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; chromosome CDS674421 918 - 0.412854
glyS NSE_0756 glycyl-tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; chromosome CDS672338 2091 - 0.409373
gshB NSE_0186 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome CDS156485 975 - 0.412308
hisS NSE_0781 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS693305 1242 - 0.401771
ileS NSE_0537 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; chromosome CDS463967 3138 + 0.395793
infA NSE_0882 translation initiation factor IF-1SubName: Full=Translation initiation factor IF-1; chromosome CDS787815 282 - 0.429078
infB NSE_0522 translation initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS446040 2340 + 0.42094
infC NSE_0293 translation initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS237738 570 - 0.391228
ksgA NSE_0362 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS295681 789 - 0.410646
leuS NSE_0506 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS425402 2556 - 0.391236
lysS NSE_0773 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; chromosome CDS688535 1518 - 0.416337
map NSE_0337 methionine aminopeptidase, type IRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS277355 789 - 0.416984
metG NSE_0893 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; chromosome CDS797690 1512 + 0.406746
miaA NSE_0570 tRNA delta(2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS495140 918 - 0.433551
miaB NSE_0832 tRNA-i(6)A37 modification enzyme MiaBRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS737392 1416 + 0.403955
pheS NSE_0216 phenylalanyl-tRNA synthetase, alpha subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; chromosome CDS182149 978 + 0.451943
pnp NSE_0057 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS49726 2274 - 0.458223
prfA NSE_0406 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS329625 1104 + 0.422101
prfB NSE_0604 peptide chain release factor 2, programmed frameshiftRecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS527159 1098 + 0.423497
proS NSE_0367 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS300119 1311 + 0.427155
pth NSE_0307 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS250381 585 + 0.42735
rluC NSE_0556 ribosomal large subunit pseudouridine synthase CRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS483642 918 - 0.391068
rnpA NSE_0857 ribonuclease P protein componentSubName: Full=Ribonuclease P protein component; EC=3.1.26.5; chromosome CDS758205 342 + 0.450292
rplA NSE_0681 ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS603379 630 - 0.412698
rplB NSE_0269 ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS226016 840 + 0.466667
rplC NSE_0266 ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS224453 633 + 0.461295
rplD NSE_0267 ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS225085 645 + 0.454264
rplE NSE_0278 ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS229652 534 + 0.440075
rplF NSE_0281 ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS230925 531 + 0.431262
rplI NSE_0060 ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS53784 483 - 0.465839
rplJ NSE_0680 50S ribosomal protein L10SubName: Full=50S ribosomal protein L10; chromosome CDS602843 525 - 0.419048
rplK NSE_0682 ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS604010 423 - 0.432624
rplL NSE_0679 ribosomal protein L7/L12SubName: Full=Ribosomal protein L7/L12; chromosome CDS602388 414 - 0.425121
rplM NSE_0840 ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS742460 459 - 0.442266
rplN NSE_0276 ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS228966 360 + 0.416667
rplO NSE_0284 ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS232360 450 + 0.446667
rplP NSE_0273 ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS228112 420 + 0.454762
rplQ NSE_0290 ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS236560 354 + 0.435028
rplR NSE_0282 ribosomal protein L18SubName: Full=Ribosomal protein L18; chromosome CDS231475 354 + 0.435028
rplS NSE_0895 ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS799555 363 - 0.413223
rplT NSE_0215 ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS181799 354 + 0.463277
rplU NSE_0898 ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS800931 300 - 0.456667
rplV NSE_0271 ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS227136 342 + 0.418129
rplW NSE_0268 ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS225726 285 + 0.407018
rplX NSE_0277 ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS229322 315 + 0.434921
rpmA NSE_0897 ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS800634 249 - 0.477912
rpmC NSE_0274 ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS228528 195 + 0.430769
rpmF NSE_0633 ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS554089 192 - 0.489583
rpmG NSE_0257 ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS218995 180 + 0.394444
rpmH NSE_0856 ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS758080 135 + 0.414815
rpsA NSE_0408 ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS331727 1662 + 0.422984
rpsB NSE_0948 ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS835332 897 - 0.429208
rpsC NSE_0272 ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS227461 636 + 0.429245
rpsD NSE_0583 ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS507288 618 - 0.435275
rpsE NSE_0283 ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS231845 519 + 0.431599
rpsF NSE_0062 ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS54545 345 - 0.446377
rpsG NSE_0688 ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS608672 528 - 0.460227
rpsH NSE_0280 ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS230527 396 + 0.431818
rpsI NSE_0839 ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS742020 438 - 0.509132
rpsJ NSE_0265 ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS224149 312 + 0.471154
rpsK NSE_0288 ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS235140 363 + 0.465565
rpsL NSE_0689 ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS609211 372 - 0.465054
rpsM NSE_0287 ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS234756 372 + 0.427419
rpsN NSE_0279 ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS230202 306 + 0.441176
rpsO NSE_0058 ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS52003 261 - 0.37931
rpsP NSE_0123 ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS101663 258 + 0.430233
rpsQ NSE_0275 ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS228724 225 + 0.466667
rpsR NSE_0061 ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS54279 222 - 0.490991
rpsS NSE_0270 ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS226864 276 + 0.423913
rpsT NSE_0792 ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS703922 264 - 0.492424
rpsU NSE_0827 ribosomal protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS734719 195 - 0.45641
rrmJ NSE_0546 ribosomal RNA large subunit methyltransferase JRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS475908 642 - 0.404984
serS NSE_0569 seryl-tRNA synthetaseSubName: Full=Seryl-tRNA synthetase; EC=6.1.1.11; chromosome CDS493675 1248 - 0.40625
tgt NSE_0016 queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; chromosome CDS13098 1209 - 0.397849
thrS NSE_0294 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS238350 1914 - 0.417973
trmD NSE_0896 tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS799941 678 - 0.483776
trmU NSE_0468 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS385977 1116 - 0.405018
trpS NSE_0213 tryptophanyl-tRNA synthetaseSubName: Full=Tryptophanyl-tRNA synthetase; EC=6.1.1.2; chromosome CDS180524 993 + 0.434038
truA NSE_0020 tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS17293 732 + 0.40847
truB NSE_0101 tRNA pseudouridine synthase BRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS81266 708 + 0.44209
tsf NSE_0947 translation elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS834437 873 - 0.442153
tuf NSE_0686 translation elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS605262 1293 - 0.460944
tyrS NSE_0345 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; chromosome CDS283091 1176 - 0.406463