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2024-05-07 04:46:41

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Neorickettsia sennetsu str. Miyayama, Miyayama

Number of genes found: 120

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Neorickettsia sennetsu str. Miyayama, Miyayama
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NSE_0343 ribosomal subunit interface proteinchromosome CDS282179 561 + 0.365419
NA NSE_0038 conserved hypothetical proteinchromosome CDS29541 303 + 0.40264
NA NSE_0579 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS505364 588 - 0.392857
NA NSE_0503 conserved hypothetical proteinchromosome CDS424002 231 - 0.424242
NA NSE_0646 polyA polymerase family proteinchromosome CDS566524 1179 + 0.402884
NA NSE_0197 putative lipoproteinchromosome CDS167307 399 - 0.41604
NA NSE_0910 GTP-binding protein YchFchromosome CDS808080 1053 + 0.402659
NA NSE_0529 3'-5' exonuclease family proteinchromosome CDS455796 621 - 0.436393
NA NSE_0214 ribosomal protein L35chromosome CDS181579 207 + 0.429952
NA NSE_0120 ribonuclease, Rne/Rng familychromosome CDS97557 1650 + 0.408485
NA NSE_0365 hypothetical proteinchromosome CDS296771 1125 + 0.370667
NA NSE_0146 ribosomal large subunit pseudouridine synthases, RluA familychromosome CDS118090 993 + 0.431017
NA NSE_0306 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5chromosome CDS249797 585 + 0.437607
NA NSE_0128 modification methylase, HemK familychromosome CDS105557 870 + 0.425287
NA NSE_0785 tRNA modification enzyme, MiaB familychromosome CDS697345 1290 - 0.409302
NA NSE_0262 RNA methyltransferase, TrmH family, group 3chromosome CDS223091 732 - 0.400273
NA NSE_0138 putative RNA pseudouridylate synthase, truncationchromosome CDS112840 360 - 0.436111
NA NSE_0927 conserved hypothetical proteinchromosome CDS821998 135 - 0.407407
NA NSE_0085 cytidine/deoxycytidylate deaminase family proteinchromosome CDS73527 435 + 0.422989
NA NSE_0373 putative tRNA-dihydrouridine synthasechromosome CDS306962 996 - 0.403614
NA NSE_0124 putative 16S rRNA processing protein RimMchromosome CDS101917 492 + 0.45935
NA NSE_0321 ribosomal protein L28chromosome CDS265024 309 + 0.381877
NA NSE_0603 putative valyl-tRNA synthetasechromosome CDS524240 2634 - 0.409263
NA NSE_0523 putative ribosome-binding factor Achromosome CDS448388 294 + 0.384354
alaS NSE_0156 alanyl-tRNA synthetasechromosome CDS124722 2547 - 0.414605
argS NSE_0049 arginyl-tRNA synthetasechromosome CDS38541 1713 + 0.410975
aspS NSE_0477 aspartyl-tRNA synthetasechromosome CDS394279 1767 + 0.4103
cysS NSE_0333 cysteinyl-tRNA synthetasechromosome CDS271801 1524 + 0.41273
def NSE_0392 peptide deformylasechromosome CDS320139 561 + 0.442068
efp NSE_0196 translation elongation factor Pchromosome CDS166629 576 - 0.421875
fmt NSE_0094 methionyl-tRNA formyltransferasechromosome CDS78013 924 - 0.405844
frr NSE_0945 ribosome recycling factorchromosome CDS833159 558 - 0.410394
fusA NSE_0687 translation elongation factor Gchromosome CDS606585 2079 - 0.45695
gatA NSE_0256 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS217455 1449 + 0.432022
gatB NSE_0084 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS72068 1467 + 0.430811
gltX-1 NSE_0518 glutamyl-tRNA synthetasechromosome CDS441445 1302 - 0.384793
gltX-2 NSE_0737 glutamyl-tRNA synthetasechromosome CDS656477 1230 - 0.401626
glyQ NSE_0757 glycyl-tRNA synthetase, alpha subunitchromosome CDS674421 918 - 0.412854
glyS NSE_0756 glycyl-tRNA synthetase, beta subunitchromosome CDS672338 2091 - 0.409373
gshB NSE_0186 glutathione synthetasechromosome CDS156485 975 - 0.412308
hisS NSE_0781 histidyl-tRNA synthetasechromosome CDS693305 1242 - 0.401771
ileS NSE_0537 isoleucyl-tRNA synthetasechromosome CDS463967 3138 + 0.395793
infA NSE_0882 translation initiation factor IF-1chromosome CDS787815 282 - 0.429078
infB NSE_0522 translation initiation factor IF-2chromosome CDS446040 2340 + 0.42094
infC NSE_0293 translation initiation factor IF-3chromosome CDS237738 570 - 0.391228
ksgA NSE_0362 dimethyladenosine transferasechromosome CDS295681 789 - 0.410646
leuS NSE_0506 leucyl-tRNA synthetasechromosome CDS425402 2556 - 0.391236
lysS NSE_0773 lysyl-tRNA synthetasechromosome CDS688535 1518 - 0.416337
map NSE_0337 methionine aminopeptidase, type Ichromosome CDS277355 789 - 0.416984
metG NSE_0893 methionyl-tRNA synthetasechromosome CDS797690 1512 + 0.406746
miaA NSE_0570 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS495140 918 - 0.433551
miaB NSE_0832 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS737392 1416 + 0.403955
pheS NSE_0216 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS182149 978 + 0.451943
pnp NSE_0057 polyribonucleotide nucleotidyltransferasechromosome CDS49726 2274 - 0.458223
prfA NSE_0406 peptide chain release factor 1chromosome CDS329625 1104 + 0.422101
prfB NSE_0604 peptide chain release factor 2, programmed frameshiftchromosome CDS527159 1098 + 0.423497
proS NSE_0367 prolyl-tRNA synthetasechromosome CDS300119 1311 + 0.427155
pth NSE_0307 peptidyl-tRNA hydrolasechromosome CDS250381 585 + 0.42735
rluC NSE_0556 ribosomal large subunit pseudouridine synthase Cchromosome CDS483642 918 - 0.391068
rnpA NSE_0857 ribonuclease P protein componentchromosome CDS758205 342 + 0.450292
rplA NSE_0681 ribosomal protein L1chromosome CDS603379 630 - 0.412698
rplB NSE_0269 ribosomal protein L2chromosome CDS226016 840 + 0.466667
rplC NSE_0266 ribosomal protein L3chromosome CDS224453 633 + 0.461295
rplD NSE_0267 ribosomal protein L4chromosome CDS225085 645 + 0.454264
rplE NSE_0278 ribosomal protein L5chromosome CDS229652 534 + 0.440075
rplF NSE_0281 ribosomal protein L6chromosome CDS230925 531 + 0.431262
rplI NSE_0060 ribosomal protein L9chromosome CDS53784 483 - 0.465839
rplJ NSE_0680 50S ribosomal protein L10chromosome CDS602843 525 - 0.419048
rplK NSE_0682 ribosomal protein L11chromosome CDS604010 423 - 0.432624
rplL NSE_0679 ribosomal protein L7/L12chromosome CDS602388 414 - 0.425121
rplM NSE_0840 ribosomal protein L13chromosome CDS742460 459 - 0.442266
rplN NSE_0276 ribosomal protein L14chromosome CDS228966 360 + 0.416667
rplO NSE_0284 ribosomal protein L15chromosome CDS232360 450 + 0.446667
rplP NSE_0273 ribosomal protein L16chromosome CDS228112 420 + 0.454762
rplQ NSE_0290 ribosomal protein L17chromosome CDS236560 354 + 0.435028
rplR NSE_0282 ribosomal protein L18chromosome CDS231475 354 + 0.435028
rplS NSE_0895 ribosomal protein L19chromosome CDS799555 363 - 0.413223
rplT NSE_0215 ribosomal protein L20chromosome CDS181799 354 + 0.463277
rplU NSE_0898 ribosomal protein L21chromosome CDS800931 300 - 0.456667
rplV NSE_0271 ribosomal protein L22chromosome CDS227136 342 + 0.418129
rplW NSE_0268 ribosomal protein L23chromosome CDS225726 285 + 0.407018
rplX NSE_0277 ribosomal protein L24chromosome CDS229322 315 + 0.434921
rpmA NSE_0897 ribosomal protein L27chromosome CDS800634 249 - 0.477912
rpmC NSE_0274 ribosomal protein L29chromosome CDS228528 195 + 0.430769
rpmF NSE_0633 ribosomal protein L32chromosome CDS554089 192 - 0.489583
rpmG NSE_0257 ribosomal protein L33chromosome CDS218995 180 + 0.394444
rpmH NSE_0856 ribosomal protein L34chromosome CDS758080 135 + 0.414815
rpsA NSE_0408 ribosomal protein S1chromosome CDS331727 1662 + 0.422984
rpsB NSE_0948 ribosomal protein S2chromosome CDS835332 897 - 0.429208
rpsC NSE_0272 ribosomal protein S3chromosome CDS227461 636 + 0.429245
rpsD NSE_0583 ribosomal protein S4chromosome CDS507288 618 - 0.435275
rpsE NSE_0283 ribosomal protein S5chromosome CDS231845 519 + 0.431599
rpsF NSE_0062 ribosomal protein S6chromosome CDS54545 345 - 0.446377
rpsG NSE_0688 ribosomal protein S7chromosome CDS608672 528 - 0.460227
rpsH NSE_0280 ribosomal protein S8chromosome CDS230527 396 + 0.431818
rpsI NSE_0839 ribosomal protein S9chromosome CDS742020 438 - 0.509132
rpsJ NSE_0265 ribosomal protein S10chromosome CDS224149 312 + 0.471154
rpsK NSE_0288 ribosomal protein S11chromosome CDS235140 363 + 0.465565
rpsL NSE_0689 ribosomal protein S12chromosome CDS609211 372 - 0.465054
rpsM NSE_0287 ribosomal protein S13chromosome CDS234756 372 + 0.427419
rpsN NSE_0279 ribosomal protein S14chromosome CDS230202 306 + 0.441176
rpsO NSE_0058 ribosomal protein S15chromosome CDS52003 261 - 0.37931
rpsP NSE_0123 ribosomal protein S16chromosome CDS101663 258 + 0.430233
rpsQ NSE_0275 ribosomal protein S17chromosome CDS228724 225 + 0.466667
rpsR NSE_0061 ribosomal protein S18chromosome CDS54279 222 - 0.490991
rpsS NSE_0270 ribosomal protein S19chromosome CDS226864 276 + 0.423913
rpsT NSE_0792 ribosomal protein S20chromosome CDS703922 264 - 0.492424
rpsU NSE_0827 ribosomal protein S21chromosome CDS734719 195 - 0.45641
rrmJ NSE_0546 ribosomal RNA large subunit methyltransferase Jchromosome CDS475908 642 - 0.404984
serS NSE_0569 seryl-tRNA synthetasechromosome CDS493675 1248 - 0.40625
tgt NSE_0016 queuine tRNA-ribosyltransferasechromosome CDS13098 1209 - 0.397849
thrS NSE_0294 threonyl-tRNA synthetasechromosome CDS238350 1914 - 0.417973
trmD NSE_0896 tRNA (guanine-N1)-methyltransferasechromosome CDS799941 678 - 0.483776
trmU NSE_0468 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS385977 1116 - 0.405018
trpS NSE_0213 tryptophanyl-tRNA synthetasechromosome CDS180524 993 + 0.434038
truA NSE_0020 tRNA pseudouridine synthase Achromosome CDS17293 732 + 0.40847
truB NSE_0101 tRNA pseudouridine synthase Bchromosome CDS81266 708 + 0.44209
tsf NSE_0947 translation elongation factor Tschromosome CDS834437 873 - 0.442153
tuf NSE_0686 translation elongation factor Tuchromosome CDS605262 1293 - 0.460944
tyrS NSE_0345 tyrosyl-tRNA synthetasechromosome CDS283091 1176 - 0.406463