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2024-05-03 13:30:01

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bacteriophage Sal3

Number of genes found: 141

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacteriophage Sal3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSL_1207 ComF operon protein 1chromosome CDS1239115 1338 - 0.301196
NA LSL_0537 Hemolysinchromosome CDS579972 828 + 0.321256
NA LSL_1136 23S rRNA methyltransferasechromosome CDS1170455 513 - 0.298246
NA LSL_0374 Bacterial Peptide Chain Release Factor 3chromosome CDS405426 1578 + 0.346641
NA LSL_0591 Peptide release factor-glutamine N5-methyltransferasechromosome CDS634747 840 + 0.292857
NA LSL_1358 Heat shock protein 15chromosome CDS1421113 270 - 0.27037
NA LSL_1188 Ribosome-associated factor Ychromosome CDS1227384 555 - 0.354955
NA LSL_0501 Conserved hypothetical proteinchromosome CDS550450 321 + 0.274143
NA LSL_0440 Polyribonucleotide nucleotidyltransferasechromosome CDS479626 411 + 0.321168
NA LSL_1356 S1-type RNA-binding domainchromosome CDS1420126 465 - 0.354839
NA LSL_0615 16S rRNA m(5)C 967 methyltransferasechromosome CDS657156 1338 + 0.296712
NA LSL_0955 Ribosomal proteinchromosome CDS980559 327 - 0.324159
NA LSL_0999 Putative 23S rRNA m(5)C methyltransferasechromosome CDS1016726 1371 - 0.350109
NA LSL_0370 Conserved hypothetical proteinchromosome CDS400884 546 + 0.336996
NA LSL_0592 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS635604 1011 + 0.33729
NA LSL_1229 Cytosine/adenosine deaminasechromosome CDS1262491 501 - 0.329341
alaS LSL_1111 Alanyl-tRNA synthetasechromosome CDS1136973 2643 - 0.360197
ansB LSL_1219 L-asparaginasechromosome CDS1254525 981 + 0.333333
argS LSL_0677 Arginyl-tRNA synthetasechromosome CDS725008 1692 + 0.323877
asnS LSL_0689 Asparaginyl-tRNA synthetasechromosome CDS740300 1302 + 0.347158
aspS LSL_0853 Aspartyl-tRNA synthetasechromosome CDS872279 1773 + 0.357586
cysS LSL_1247 Cysteinyl-tRNA synthetasechromosome CDS1276159 1413 - 0.300778
def LSL_0363 Peptide deformylasechromosome CDS395291 312 - 0.298077
def LSL_0649 Peptide deformylasechromosome CDS694232 561 - 0.358289
dtd LSL_0823 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS841246 447 + 0.322148
efg LSL_0202 Protein Translation Elongation Factor Gchromosome CDS244403 2094 + 0.403534
efp LSL_0530 Protein Translation Elongation Factor Pchromosome CDS575133 558 + 0.342294
efp LSL_1701 Protein Translation Elongation Factor Pchromosome CDS1783118 558 - 0.344086
fmt LSL_0614 Methionyl-tRNA formyltransferasechromosome CDS656210 957 + 0.319749
frr LSL_0562 Ribosome Recycling Factor, RRFchromosome CDS600955 564 + 0.338652
gatA LSL_1345 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Achromosome CDS1397989 1464 - 0.358607
gatB LSL_1344 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Bchromosome CDS1396556 1434 - 0.366109
gatC LSL_1346 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Cchromosome CDS1399455 300 - 0.35
glnS LSL_1248 Glutamyl-tRNA synthetasechromosome CDS1277725 1488 - 0.34879
glyQ LSL_0912 Glycyl-tRNA synthetase alpha chainchromosome CDS938001 918 - 0.356209
glyS LSL_0911 Glycyl-tRNA synthetase beta chainchromosome CDS935920 2082 - 0.340538
hisS LSL_0852 Histidyl-tRNA synthetasechromosome CDS870981 1296 + 0.339506
ileS LSL_1042 Isoleucyl-tRNA synthetasechromosome CDS1065203 2796 - 0.364092
infA LSL_1413 Bacterial Protein Translation Initiation Factor 1 (IF-1)chromosome CDS1484871 219 - 0.383562
infB LSL_0572 Bacterial Protein Translation Initiation Factor 2 (IF-2)chromosome CDS613229 2214 + 0.330623
infC LSL_0495 Bacterial Protein Translation Initiation Factor 3 (IF-3)chromosome CDS545916 525 + 0.358095
ksgA LSL_0229 Dimethyladenosine transferasechromosome CDS283497 891 + 0.331089
leuS LSL_0442 Leucyl-tRNA synthetasechromosome CDS488667 2418 + 0.343259
lysS LSL_1351 Lysyl-tRNA synthetasechromosome CDS1412321 1488 - 0.356183
map LSL_1269 Methionine aminopeptidasechromosome CDS1305255 792 - 0.359848
metG LSL_0226 Methionyl-tRNA synthetase / Protein secretion chaperonin CsaAchromosome CDS279986 2028 + 0.349112
miaA LSL_0555 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS594722 924 + 0.306277
pcnB LSL_0706 Poly(A) polymerase / tRNA nucleotidyltransferasechromosome CDS752562 1215 + 0.299588
pheS LSL_0813 Phenylalanyl-tRNA synthetase alpha chainchromosome CDS829184 1047 + 0.355301
pheT LSL_0814 Phenylalanyl-tRNA synthetase beta chainchromosome CDS830237 2418 + 0.340364
prfA LSL_0590 Bacterial Peptide Chain Release Factor 1chromosome CDS633672 1083 + 0.339797
prfB LSL_1185 Bacterial Peptide Chain Release Factor 2chromosome CDS1222388 1068 - 0.354869
proS LSL_0566 Prolyl-tRNA synthetasechromosome CDS604579 1716 + 0.335082
pth LSL_1361 Peptidyl-tRNA hydrolasechromosome CDS1426515 558 - 0.301075
queA LSL_1124 S-adenosylmethionine tRNA ribosyltransferase-isomerasechromosome CDS1152457 1044 - 0.344828
rPL LSL_0571 LSU ribosomal protein L7AEchromosome CDS612852 306 + 0.29085
rbfA LSL_0573 Ribosome-binding factor Achromosome CDS615466 360 + 0.327778
rimL LSL_0319 Ribosomal-protein-serine acetyltransferasechromosome CDS349079 525 + 0.295238
rimM LSL_0632 16S rRNA processing proteinchromosome CDS676851 507 + 0.274162
rluB LSL_0938 Ribosomal large subunit pseudouridine synthase Bchromosome CDS967428 729 - 0.345679
rluD LSL_1303 Ribosomal large subunit pseudouridine synthase Dchromosome CDS1350377 888 - 0.313063
rluD LSL_1482 Ribosomal large subunit pseudouridine synthase Dchromosome CDS1539467 891 - 0.344557
rluD LSL_1457 Ribosomal large subunit pseudouridine synthase Dchromosome CDS1517675 915 - 0.328962
rluD LSL_0826 Ribosomal large subunit pseudouridine synthase Dchromosome CDS842817 897 + 0.326644
rnpA LSL_1737 Ribonuclease P protein componentchromosome CDS1826091 342 - 0.385965
rplA LSL_1239 LSU ribosomal protein L1Pchromosome CDS1272059 693 - 0.392496
rplB LSL_1432 LSU ribosomal protein L2Pchromosome CDS1493766 834 - 0.410072
rplC LSL_1435 LSU ribosomal protein L3Pchromosome CDS1495557 624 - 0.400641
rplD LSL_1434 LSU ribosomal protein L1Echromosome CDS1494909 624 - 0.383013
rplE LSL_1423 LSU ribosomal protein L5Pchromosome CDS1490153 543 - 0.364641
rplF LSL_1420 LSU ribosomal protein L6Pchromosome CDS1488953 537 - 0.379888
rplI LSL_1727 LSU ribosomal protein L9Pchromosome CDS1809124 450 - 0.342222
rplJ LSL_1238 LSU ribosomal protein L10Pchromosome CDS1271311 504 - 0.39881
rplK LSL_1240 LSU ribosomal protein L11Pchromosome CDS1272854 426 - 0.422535
rplL LSL_1237 LSU ribosomal protein L12Pchromosome CDS1270871 369 - 0.401084
rplM LSL_1403 LSU ribosomal protein L13Pchromosome CDS1478312 444 - 0.387387
rplN LSL_1425 LSU ribosomal protein L14Pchromosome CDS1491060 369 - 0.406504
rplO LSL_1416 LSU ribosomal protein L15Pchromosome CDS1487364 435 - 0.390805
rplP LSL_1428 LSU ribosomal protein L16Pchromosome CDS1491964 435 - 0.432184
rplQ LSL_1408 LSU ribosomal protein L17Pchromosome CDS1482471 384 - 0.380208
rplR LSL_1419 LSU ribosomal protein L18Pchromosome CDS1488552 357 - 0.428571
rplS LSL_0636 LSU ribosomal protein L19Pchromosome CDS680239 357 + 0.408964
rplT LSL_0497 LSU ribosomal protein L20Pchromosome CDS546770 363 + 0.38292
rplU LSL_0956 LSU ribosomal protein L21Pchromosome CDS980910 309 - 0.381877
rplV LSL_1430 LSU ribosomal protein L22Pchromosome CDS1493072 348 - 0.399425
rplW LSL_1433 LSU ribosomal protein L23Pchromosome CDS1494625 285 - 0.354386
rplX LSL_1424 LSU ribosomal protein L24Pchromosome CDS1490720 306 - 0.366013
rpmA LSL_0954 LSU ribosomal protein L27Pchromosome CDS980256 282 - 0.421986
rpmB LSL_0619 LSU ribosomal protein L28Pchromosome CDS662644 186 - 0.392473
rpmC LSL_1427 LSU ribosomal protein L29Pchromosome CDS1491780 195 - 0.317949
rpmD LSL_1417 LSU ribosomal protein L30Pchromosome CDS1487834 183 - 0.377049
rpmE LSL_0347 LSU ribosomal protein L31Pchromosome CDS378175 249 + 0.37751
rpmF LSL_0507 LSU ribosomal protein L32chromosome CDS554993 177 + 0.40678
rpmG LSL_0548 LSU ribosomal protein L33Pchromosome CDS591222 150 + 0.313333
rpmG LSL_1243 LSU ribosomal protein L33Pchromosome CDS1274264 153 - 0.333333
rpmH LSL_1738 LSU ribosomal protein L34Pchromosome CDS1826490 135 - 0.414815
rpmI LSL_0496 LSU ribosomal protein L35Pchromosome CDS546477 201 + 0.38806
rpmJ LSL_1412 LSU ribosomal protein L36Pchromosome CDS1484722 114 - 0.359649
rpsA LSL_0887 SSU ribosomal protein S1Pchromosome CDS910860 1200 - 0.380833
rpsB LSL_0511 SSU ribosomal protein S2Pchromosome CDS557234 798 + 0.369674
rpsC LSL_1429 SSU ribosomal protein S3Pchromosome CDS1492402 657 - 0.39726
rpsD LSL_1077 SSU ribosomal protein S4Pchromosome CDS1101963 606 + 0.40264
rpsE LSL_1418 SSU ribosomal protein S5Pchromosome CDS1488030 501 - 0.42515
rpsF LSL_0007 SSU ribosomal protein S6Pchromosome CDS9217 291 + 0.371134
rpsG LSL_0201 SSU ribosomal protein S7Pchromosome CDS243812 471 + 0.409766
rpsH LSL_1421 SSU ribosomal protein S8Pchromosome CDS1489522 399 - 0.358396
rpsI LSL_1402 SSU ribosomal protein S9Pchromosome CDS1477906 393 - 0.422392
rpsJ LSL_1436 SSU ribosomal protein S10Pchromosome CDS1496224 309 - 0.378641
rpsK LSL_1410 SSU ribosomal protein S11Pchromosome CDS1483917 387 - 0.431525
rpsL LSL_0200 SSU ribosomal protein S12Pchromosome CDS243364 414 + 0.384058
rpsM LSL_1411 SSU ribosomal protein S13Pchromosome CDS1484331 366 - 0.412568
rpsN LSL_1422 SSU ribosomal protein S14Pchromosome CDS1489955 186 - 0.419355
rpsO LSL_0638 SSU ribosomal protein S15Pchromosome CDS681489 270 + 0.366667
rpsP LSL_0630 SSU ribosomal protein S16Pchromosome CDS676236 276 + 0.380435
rpsQ LSL_1426 SSU ribosomal protein S17Pchromosome CDS1491487 267 - 0.359551
rpsR LSL_0009 SSU ribosomal protein S18Pchromosome CDS10121 237 + 0.42616
rpsS LSL_1431 SSU ribosomal protein S19Pchromosome CDS1493437 282 - 0.37234
rpsT LSL_0637 SSU ribosomal protein S20Pchromosome CDS680931 255 - 0.352941
rpsU LSL_0700 SSU ribosomal protein S21Pchromosome CDS748897 186 + 0.408602
rsuA LSL_0445 Ribosomal small subunit pseudouridine synthase Achromosome CDS494432 723 + 0.305671
serS LSL_0189 Seryl-tRNA synthetasechromosome CDS215973 1278 + 0.344288
spoU LSL_0810 23S rRNA methyltransferasechromosome CDS826972 762 + 0.332021
spoU LSL_1245 TRNA/rRNA methyltransferasechromosome CDS1275013 747 - 0.340027
srmB LSL_1112 ATP-dependent RNA helicasechromosome CDS1139922 1323 - 0.343915
srmB LSL_0356 ATP-dependent RNA helicasechromosome CDS389363 1479 + 0.354293
srmB LSL_1286 ATP-dependent RNA helicasechromosome CDS1326739 1281 - 0.330211
tgt LSL_1123 Queuine tRNA-ribosyltransferasechromosome CDS1151296 1146 - 0.347295
thrS LSL_0494 Threonyl-tRNA synthetasechromosome CDS543759 1950 + 0.334359
trmA LSL_0369 tRNA (Uracil-5-)-methyltransferasechromosome CDS399377 1380 + 0.322464
trmA LSL_1341 tRNA (Uracil-5-)-methyltransferasechromosome CDS1392529 1380 - 0.327536
trmD LSL_0633 tRNA (Guanine-N(1)-)-methyltransferasechromosome CDS677360 753 + 0.346614
trmU LSL_0862 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS881042 1128 + 0.35461
trpS LSL_0218 Tryptophanyl-tRNA synthetasechromosome CDS271973 1020 + 0.341176
truA LSL_1404 tRNA pseudouridine synthase Achromosome CDS1478890 771 - 0.328145
truB LSL_0574 tRNA pseudouridine synthase Bchromosome CDS615895 909 + 0.29703
tsf LSL_0512 Protein Translation Elongation Factor Tschromosome CDS558125 876 + 0.366438
tufB LSL_0642 Protein Translation Elongation Factor Tuchromosome CDS685773 1188 + 0.420875
tyrS LSL_1366 Tyrosyl-tRNA synthetasechromosome CDS1433144 1251 - 0.347722
valS LSL_1072 Valyl-tRNA synthetasechromosome CDS1093919 2661 - 0.354378
wecD LSL_0185 Acetyltransferase, GNAT familychromosome CDS210768 471 + 0.276008
wecD LSL_1003 Acetyltransferasechromosome CDS1020863 528 - 0.382576