Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Organism: Rhodospirillum rubrum ATCC 11170, ATCC 11170
Number of genes found: 169
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Rhodospirillum rubrum ATCC 11170, ATCC 11170 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Rru_A2718 | DEAD/DEAH box helicase | SubName: Full=DEAD/DEAH box helicase; | chromosome | CDS | 3141659 | 2400 | + | 0.67875 |
| NA | Rru_A0280 | Queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 344596 | 1128 | - | 0.675532 |
| NA | Rru_A3746 | Ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 4294818 | 633 | + | 0.652449 |
| NA | Rru_A3179 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 3670725 | 627 | - | 0.674641 |
| NA | Rru_A2685 | Ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 3105453 | 840 | - | 0.644048 |
| NA | Rru_A2151 | Ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 2500053 | 477 | - | 0.66457 |
| NA | Rru_A1662 | SmpA/OmlA | SubName: Full=SmpA/OmlA; Flags: Precursor; | chromosome | CDS | 1954240 | 468 | - | 0.589744 |
| NA | Rru_A0733 | Peptidase M24A, methionine aminopeptidase, subfamily 1 | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 860118 | 816 | - | 0.613971 |
| NA | Rru_A2152 | Ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 2500533 | 465 | - | 0.608602 |
| NA | Rru_A0360 | Initiation factor 2B alpha/beta/delta | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 434241 | 1173 | - | 0.697357 |
| NA | Rru_A2675 | Ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 3101576 | 306 | - | 0.614379 |
| NA | Rru_A3521 | Ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 4053441 | 198 | + | 0.560606 |
| NA | Rru_A2683 | Ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 3104779 | 381 | - | 0.635171 |
| NA | Rru_A2043 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2363022 | 1044 | - | 0.627395 |
| NA | Rru_A3649 | 2',5' RNA ligase | SubName: Full=2,5 RNA ligase; | chromosome | CDS | 4188468 | 600 | - | 0.661667 |
| NA | Rru_A3747 | Aminoacyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 4295478 | 732 | + | 0.678962 |
| NA | Rru_A0366 | Polynucleotide adenylyltransferase region | SubName: Full=Polynucleotide adenylyltransferase region; EC=2.7.7.72; | chromosome | CDS | 439994 | 1578 | - | 0.725602 |
| NA | Rru_A1043 | Ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 1236100 | 243 | - | 0.613169 |
| NA | Rru_A1601 | Glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase 2; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 2; Short=GluRS 2; | chromosome | CDS | 1886099 | 1407 | - | 0.66027 |
| NA | Rru_A1757 | Gid protein | RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO; EC=2.1.1.74; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase; | chromosome | CDS | 2050135 | 1449 | + | 0.68254 |
| NA | Rru_A2672 | Ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 3100239 | 363 | - | 0.628099 |
| NA | Rru_A2032 | Tyrosyl-tRNA synthetase, class Ib | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 2344729 | 1257 | + | 0.666667 |
| NA | Rru_A1174 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 1390698 | 345 | + | 0.652174 |
| NA | Rru_A2699 | Ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 3123721 | 429 | - | 0.629371 |
| NA | Rru_A0983 | Amidase | SubName: Full=Amidase; EC=3.5.1.4; | chromosome | CDS | 1169495 | 1458 | + | 0.691358 |
| NA | Rru_A3196 | Plasmid stabilization system | SubName: Full=Plasmid stabilization system; | chromosome | CDS | 3684403 | 270 | + | 0.603704 |
| NA | Rru_A2665 | Ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 3095776 | 390 | - | 0.635897 |
| NA | Rru_A1576 | Prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 1856768 | 1308 | + | 0.63685 |
| NA | Rru_A3660 | tRNA and rRNA cytosine-C5-methylase | SubName: Full=tRNA and rRNA cytosine-C5-methylase; Flags: Precursor; | chromosome | CDS | 4201854 | 1317 | - | 0.730448 |
| NA | Rru_A0015 | 3'-5' exonuclease | SubName: Full=3-5 exonuclease; EC=2.7.7.7; | chromosome | CDS | 16232 | 621 | - | 0.647343 |
| NA | Rru_A3783 | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 4333312 | 927 | + | 0.644013 |
| NA | Rru_A1711 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 2003823 | 408 | + | 0.644608 |
| NA | Rru_A3436 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; EC=2.7.7.13; | chromosome | CDS | 3958953 | 762 | - | 0.66273 |
| NA | Rru_A2666 | Ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 3096259 | 369 | - | 0.601626 |
| NA | Rru_A0652 | Pseudouridine synthase, Rsu | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 772842 | 882 | + | 0.690476 |
| NA | Rru_A2620 | Hemolysin A | SubName: Full=Hemolysin A; | chromosome | CDS | 3048958 | 795 | + | 0.693082 |
| NA | Rru_A3770 | tRNA-i(6)A37 modification enzyme MiaB | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 4318290 | 1404 | + | 0.661681 |
| NA | Rru_A3212 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3702360 | 771 | - | 0.612192 |
| NA | Rru_A3175 | Glutamyl-tRNA(Gln) amidotransferase B subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 3666819 | 1458 | - | 0.636488 |
| NA | Rru_A1182 | MiaB-like tRNA modifying enzyme | SubName: Full=MiaB-like tRNA modifying enzyme; | chromosome | CDS | 1399551 | 1326 | - | 0.695324 |
| NA | Rru_A3352 | Pseudouridylate synthase | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 3865771 | 837 | + | 0.678614 |
| NA | Rru_A2671 | Ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 3099629 | 600 | - | 0.678333 |
| NA | Rru_A0421 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 496749 | 327 | - | 0.633027 |
| NA | Rru_A2767 | ribonuclease G (RNase G) | SubName: Full=Ribonuclease G (RNase G); | chromosome | CDS | 3201617 | 1383 | - | 0.757773 |
| NA | Rru_A2673 | Ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 3100611 | 534 | - | 0.608614 |
| NA | Rru_A1242 | Ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 1464820 | 303 | - | 0.623762 |
| NA | Rru_A0210 | Ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 262704 | 300 | - | 0.653333 |
| NA | Rru_A3631 | Leucyl-tRNA synthetase, class Ia | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 4171032 | 2589 | - | 0.658555 |
| NA | Rru_A2703 | RNA methyltransferase TrmH, group 3 | SubName: Full=RNA methyltransferase TrmH, group 3; | chromosome | CDS | 3127112 | 1047 | + | 0.726839 |
| NA | Rru_A2467 | Ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 2866924 | 177 | - | 0.632768 |
| NA | Rru_A2663 | Ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 3094007 | 423 | - | 0.631206 |
| NA | Rru_A2149 | Ribonuclease E and G | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 2496163 | 2670 | + | 0.673408 |
| NA | Rru_A0243 | tRNA/rRNA cytosine-C5-methylase | SubName: Full=tRNA/rRNA cytosine-C5-methylase; | chromosome | CDS | 301475 | 1365 | - | 0.706227 |
| NA | Rru_A1077 | Elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 1268670 | 564 | - | 0.585106 |
| NA | Rru_A0650 | Cytidine/deoxycytidylate deaminase, zinc-binding region | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 771381 | 480 | - | 0.70625 |
| NA | Rru_A2687 | Ribosomal protein L4/L1e | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 3106607 | 621 | - | 0.63124 |
| NA | Rru_A1044 | Peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 1236659 | 510 | + | 0.65098 |
| NA | Rru_A0281 | Queuosine biosynthesis protein | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 345720 | 1038 | - | 0.681118 |
| NA | Rru_A1587 | elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 1871368 | 930 | + | 0.664516 |
| NA | Rru_A3690 | Glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 4236261 | 957 | - | 0.625914 |
| NA | Rru_A1187 | tRNA (guanine-N(1)-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 1404850 | 720 | + | 0.656944 |
| NA | Rru_A0750 | Peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 879011 | 1065 | + | 0.680751 |
| NA | Rru_A1701 | Methionyl-tRNA synthetase, class Ia | RecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; | chromosome | CDS | 1990869 | 1560 | - | 0.650641 |
| NA | Rru_A0365 | tRNA/rRNA methyltransferase (SpoU) | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 439510 | 483 | + | 0.63354 |
| NA | Rru_A2686 | Ribosomal L23 protein | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 3106296 | 315 | - | 0.606349 |
| NA | Rru_A2954 | Glycine--tRNA ligase | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 3402562 | 888 | + | 0.648649 |
| NA | Rru_A3488 | Initiation factor 3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 4014437 | 522 | + | 0.584291 |
| NA | Rru_A3176 | Glutamyl-tRNA(Gln) amidotransferase A subunit | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 3668276 | 1503 | - | 0.673985 |
| NA | Rru_A2040 | Peptide chain release factor 2 | SubName: Full=Bacterial peptide chain release factor 2 (BRF-2); | chromosome | CDS | 2359390 | 969 | - | 0.615067 |
| NA | Rru_A1796 | Valyl-tRNA synthetase, class Ia | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; | chromosome | CDS | 2088061 | 2640 | - | 0.646591 |
| NA | Rru_A2677 | Ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 3102447 | 321 | - | 0.64486 |
| NA | Rru_A2698 | Ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 3123015 | 702 | - | 0.653846 |
| NA | Rru_A2681 | Ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 3103672 | 417 | - | 0.64988 |
| NA | Rru_A0411 | Ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 488893 | 588 | - | 0.64966 |
| NA | Rru_A1111 | Pseudouridine synthase, RluD | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1306656 | 1032 | - | 0.625 |
| NA | Rru_A3350 | Peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 3864323 | 519 | + | 0.608863 |
| NA | Rru_A2818 | Alanine--tRNA ligase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 3249244 | 2652 | - | 0.673454 |
| NA | Rru_A3523 | Phenylalanyl-tRNA synthetase, alpha subunit | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 4054235 | 1077 | + | 0.656453 |
| NA | Rru_A2107 | 23S rRNA (uracil-5-)-methyltransferase RumA | SubName: Full=23S rRNA (Uracil-5-)-methyltransferase RumA; EC=2.1.1.-; | chromosome | CDS | 2442015 | 1398 | + | 0.740343 |
| NA | Rru_A1665 | Ribosomal protein S32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1956259 | 186 | + | 0.607527 |
| NA | Rru_A0245 | Ribosomal RNA methyltransferase RrmJ/FtsJ | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 304661 | 792 | - | 0.67298 |
| NA | Rru_A0701 | Ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 830110 | 615 | + | 0.595122 |
| NA | Rru_A2955 | Glycine--tRNA ligase | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 3403455 | 2166 | + | 0.67867 |
| NA | Rru_A2457 | Endoribonuclease L-PSP | SubName: Full=Endoribonuclease L-PSP; | chromosome | CDS | 2855844 | 462 | + | 0.666667 |
| NA | Rru_A2227 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 2586494 | 531 | + | 0.561205 |
| NA | Rru_A0413 | Ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 490521 | 237 | - | 0.64557 |
| NA | Rru_A2696 | Ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 3121696 | 372 | - | 0.615591 |
| NA | Rru_A2691 | Translation elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 3109594 | 2079 | - | 0.618567 |
| NA | Rru_A0748 | Histidyl-tRNA synthetase, class IIa | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 876421 | 1248 | + | 0.677083 |
| NA | Rru_A0074 | Helicase-like | SubName: Full=Helicase-like; | chromosome | CDS | 85794 | 3201 | + | 0.690097 |
| NA | Rru_A3641 | Ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 4182078 | 723 | - | 0.672199 |
| NA | Rru_A2692 | Ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 3111709 | 471 | - | 0.615711 |
| NA | Rru_A2678 | Ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 3102767 | 369 | - | 0.601626 |
| NA | Rru_A3487 | Threonyl-tRNA synthetase, class IIa | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 4012361 | 1932 | + | 0.641822 |
| NA | Rru_A0097 | Class I peptide chain release factor | SubName: Full=Class I peptide chain release factor; | chromosome | CDS | 111258 | 423 | - | 0.673759 |
| NA | Rru_A0689 | Cysteine--tRNA ligase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 814140 | 1380 | + | 0.663043 |
| NA | Rru_A3748 | conserved hypothetical protein | RecName: Full=Ribosome-binding ATPase YchF; Flags: Precursor; | chromosome | CDS | 4296213 | 1104 | + | 0.643116 |
| NA | Rru_A2705 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3128927 | 246 | + | 0.581301 |
| NA | Rru_A0073 | ribosomal subunit interface protein, putative | SubName: Full=Ribosomal subunit interface protein, putative; | chromosome | CDS | 85297 | 381 | + | 0.538058 |
| NA | Rru_A3522 | Ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 4053693 | 378 | + | 0.640212 |
| NA | Rru_A2690 | Translation elongation factor Tu | RecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; | chromosome | CDS | 3108373 | 1191 | - | 0.628044 |
| NA | Rru_A2682 | ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 3104108 | 672 | - | 0.633929 |
| NA | Rru_A1939 | Pseudouridine synthase, Rsu | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2246881 | 600 | + | 0.703333 |
| NA | Rru_A2072 | Aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 2397395 | 1821 | - | 0.637013 |
| NA | Rru_A3450 | Ribonuclease T2 | SubName: Full=Ribonuclease T2; Flags: Precursor; | chromosome | CDS | 3973519 | 1071 | + | 0.718021 |
| NA | Rru_A2689 | Ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 3107969 | 309 | - | 0.61165 |
| NA | Rru_A2497 | Peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 2903546 | 1593 | - | 0.632768 |
| NA | Rru_A2676 | Ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 3101899 | 540 | - | 0.572222 |
| NA | Rru_A2024 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 2337841 | 1134 | - | 0.702822 |
| NA | Rru_A3351 | Methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 3864838 | 930 | + | 0.702151 |
| NA | Rru_A3784 | Ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 4334285 | 270 | + | 0.57037 |
| NA | Rru_A1072 | Ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 1263169 | 219 | - | 0.561644 |
| NA | Rru_A2688 | Ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 3107234 | 708 | - | 0.649718 |
| NA | Rru_A2764 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3198383 | 1470 | - | 0.619048 |
| NA | Rru_A0293 | Ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 358078 | 1722 | - | 0.634727 |
| NA | Rru_A1185 | Ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 1403752 | 375 | + | 0.698667 |
| NA | Rru_A2659 | Pseudouridine synthase, RluD | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3087919 | 993 | - | 0.691843 |
| NA | Rru_A1188 | Ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 1405566 | 492 | + | 0.628049 |
| NA | Rru_A2684 | Ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 3105162 | 279 | - | 0.577061 |
| NA | Rru_A3535 | Tryptophanyl-tRNA synthetase, class Ib | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; | chromosome | CDS | 4066271 | 999 | - | 0.635636 |
| NA | Rru_A2811 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 3244402 | 1326 | + | 0.657617 |
| NA | Rru_A1140 | Elongation factor G | SubName: Full=Elongation factor G; | chromosome | CDS | 1344652 | 2016 | + | 0.65377 |
| NA | Rru_A3802 | Ribosomal protein S20p | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 4352015 | 267 | + | 0.632959 |
| NA | Rru_A0466 | tRNA isopentenyltransferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 546394 | 981 | + | 0.707441 |
| NA | Rru_A2693 | Ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 3112195 | 372 | - | 0.61828 |
| NA | Rru_A1676 | Dihydrouridine synthase TIM-barrel protein nifR3 | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 1965546 | 1089 | + | 0.710744 |
| NA | Rru_A0431 | 16S rRNA dimethylase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 503183 | 867 | - | 0.712803 |
| NA | Rru_A0519 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 612937 | 189 | - | 0.661376 |
| NA | Rru_A1078 | tRNA synthetase, class II (D, K and N) | SubName: Full=tRNA synthetase, class II (D, K and N); EC=6.1.1.6; | chromosome | CDS | 1269339 | 1077 | + | 0.686165 |
| NA | Rru_A1178 | Anticodon-binding | SubName: Full=Anticodon-binding; | chromosome | CDS | 1394721 | 1164 | + | 0.737113 |
| NA | Rru_A3782 | Ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 4332821 | 495 | + | 0.69899 |
| NA | Rru_A1586 | Ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 1870364 | 789 | + | 0.629911 |
| NA | Rru_A2697 | Ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 3122126 | 519 | - | 0.630058 |
| NA | Rru_A0503 | Lysine--tRNA ligase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 591916 | 1653 | + | 0.626739 |
| NA | Rru_A3336 | Ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 3849462 | 135 | + | 0.674074 |
| NA | Rru_A1621 | Dihydrouridine synthase TIM-barrel protein yjbN | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 1913328 | 1050 | - | 0.674286 |
| NA | Rru_A3730 | asparaginase | SubName: Full=Asparaginase; EC=3.5.1.1; | chromosome | CDS | 4281965 | 519 | + | 0.645472 |
| NA | Rru_A1770 | Serine--tRNA ligase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 2062286 | 1272 | - | 0.671384 |
| NA | Rru_A0696 | RNA methyltransferase TrmH, group 1 | SubName: Full=RNA methyltransferase TrmH, group 1; Flags: Precursor; | chromosome | CDS | 825410 | 840 | + | 0.664286 |
| NA | Rru_A3781 | Initiation factor 2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 4329955 | 2622 | + | 0.666667 |
| NA | Rru_A1386 | DEAD/DEAH box helicase | SubName: Full=DEAD/DEAH box helicase; | chromosome | CDS | 1636167 | 2034 | + | 0.702065 |
| NA | Rru_A3337 | ribonuclease P protein | SubName: Full=Ribonuclease P protein; EC=3.1.26.5; | chromosome | CDS | 3849628 | 525 | + | 0.708571 |
| NA | Rru_A2966 | Isoleucyl-tRNA synthetase, class Ia | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; | chromosome | CDS | 3415796 | 2823 | + | 0.656394 |
| NA | Rru_A0075 | RNA-binding S4 | SubName: Full=RNA-binding S4; | chromosome | CDS | 88991 | 435 | + | 0.714943 |
| NA | Rru_A2679 | Ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 3103201 | 240 | - | 0.525 |
| NA | Rru_A3734 | Glutamyl-tRNA synthetase, class Ic | SubName: Full=Glutamyl-tRNA synthetase, class Ic; EC=6.1.1.17; | chromosome | CDS | 4284486 | 882 | + | 0.701814 |
| NA | Rru_A3780 | Protein of unknown function DUF448 | SubName: Full=LSU ribosomal protein L7AE; | chromosome | CDS | 4328991 | 792 | + | 0.69697 |
| NA | Rru_A2674 | Ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 3101161 | 399 | - | 0.629073 |
| NA | Rru_A2073 | Ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 2399339 | 1161 | + | 0.654608 |
| NA | Rru_A1589 | Ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1873238 | 576 | + | 0.637153 |
| NA | Rru_A0662 | Translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 786071 | 288 | - | 0.618056 |
| NA | Rru_A2866 | Ribosomal protein L11 methyltransferase | SubName: Full=LSU ribosomal protein L11P methyltransferase; EC=2.1.1.-; | chromosome | CDS | 3300435 | 894 | - | 0.671141 |
| NA | Rru_A0688 | Glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase 1; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase 1; Short=GluRS 1; | chromosome | CDS | 812746 | 1335 | + | 0.698876 |
| NA | Rru_A2680 | Ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 3103463 | 207 | - | 0.642512 |
| NA | Rru_A2702 | Translation elongation factor Tu | RecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; | chromosome | CDS | 3125604 | 1191 | - | 0.626364 |
| NA | Rru_A1241 | Ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 1464508 | 258 | - | 0.612403 |
| NA | Rru_A1186 | 16S rRNA processing protein RimM | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 1404248 | 606 | + | 0.665016 |
| NA | Rru_A3205 | Ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 3696846 | 168 | + | 0.571429 |
| NA | Rru_A1915 | DEAD/DEAH box helicase | SubName: Full=DEAD/DEAH box helicase; | chromosome | CDS | 2219219 | 1182 | + | 0.65736 |
| NA | Rru_A0552 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 652820 | 630 | - | 0.668254 |
| NA | Rru_A3372 | tRNA/rRNA methyltransferase (SpoU) | SubName: Full=tRNA/rRNA methyltransferase (SpoU); | chromosome | CDS | 3888170 | 612 | + | 0.655229 |
| NA | Rru_A3177 | Glutamyl-tRNA(Gln) amidotransferase C subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 3669787 | 288 | - | 0.625 |
| NA | Rru_A1779 | Arginine--tRNA ligase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 2070080 | 1779 | - | 0.657111 |
| NA | Rru_A0414 | Ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 490754 | 483 | - | 0.63354 |
| NA | Rru_A0751 | Modification methylase HemK | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 880072 | 978 | + | 0.712679 |
| NA | Rru_A3785 | 3' exoribonuclease | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 4334832 | 2127 | + | 0.64551 |
| NA | Rru_A2670 | Ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 3099426 | 192 | - | 0.640625 |
| NA | Rru_A2669 | Ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 3098920 | 489 | - | 0.654397 |
| NA | Rru_A0444 | Sua5/YciO/YrdC/YwlC | SubName: Full=Translation factor SUA5; | chromosome | CDS | 522974 | 969 | - | 0.749226 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|