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2024-04-28 04:44:45

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Rhodospirillum rubrum ATCC 11170, ATCC 11170

Number of genes found: 169

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodospirillum rubrum ATCC 11170, ATCC 11170
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rru_A2670 Ribosomal protein L30chromosome CDS3099426 192 - 0.640625
NA Rru_A2718 DEAD/DEAH box helicasechromosome CDS3141659 2400 + 0.67875
NA Rru_A3337 ribonuclease P proteinchromosome CDS3849628 525 + 0.708571
NA Rru_A2673 Ribosomal protein L6chromosome CDS3100611 534 - 0.608614
NA Rru_A1188 Ribosomal protein L19chromosome CDS1405566 492 + 0.628049
NA Rru_A2702 Translation elongation factor Tuchromosome CDS3125604 1191 - 0.626364
NA Rru_A2683 Ribosomal protein L22chromosome CDS3104779 381 - 0.635171
NA Rru_A2676 Ribosomal protein L5chromosome CDS3101899 540 - 0.572222
NA Rru_A1072 Ribosomal protein L31chromosome CDS1263169 219 - 0.561644
NA Rru_A2690 Translation elongation factor Tuchromosome CDS3108373 1191 - 0.628044
NA Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbNchromosome CDS1913328 1050 - 0.674286
NA Rru_A2663 Ribosomal protein L17chromosome CDS3094007 423 - 0.631206
NA Rru_A2811 conserved hypothetical proteinchromosome CDS3244402 1326 + 0.657617
NA Rru_A0652 Pseudouridine synthase, Rsuchromosome CDS772842 882 + 0.690476
NA Rru_A2659 Pseudouridine synthase, RluDchromosome CDS3087919 993 - 0.691843
NA Rru_A1589 Ribosome recycling factorchromosome CDS1873238 576 + 0.637153
NA Rru_A3488 Initiation factor 3chromosome CDS4014437 522 + 0.584291
NA Rru_A0662 Translation initiation factor IF-1chromosome CDS786071 288 - 0.618056
NA Rru_A2685 Ribosomal protein L2chromosome CDS3105453 840 - 0.644048
NA Rru_A3747 Aminoacyl-tRNA hydrolasechromosome CDS4295478 732 + 0.678962
NA Rru_A1187 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS1404850 720 + 0.656944
NA Rru_A3175 Glutamyl-tRNA(Gln) amidotransferase B subunitchromosome CDS3666819 1458 - 0.636488
NA Rru_A2955 Glycine--tRNA ligasechromosome CDS3403455 2166 + 0.67867
NA Rru_A2698 Ribosomal protein L1chromosome CDS3123015 702 - 0.653846
NA Rru_A2680 Ribosomal protein L29chromosome CDS3103463 207 - 0.642512
NA Rru_A0983 Amidasechromosome CDS1169495 1458 + 0.691358
NA Rru_A2764 conserved hypothetical proteinchromosome CDS3198383 1470 - 0.619048
NA Rru_A1043 Ribosomal protein S21chromosome CDS1236100 243 - 0.613169
NA Rru_A0688 Glutamyl-tRNA synthetasechromosome CDS812746 1335 + 0.698876
NA Rru_A3523 Phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS4054235 1077 + 0.656453
NA Rru_A2691 Translation elongation factor Gchromosome CDS3109594 2079 - 0.618567
NA Rru_A2043 hypothetical proteinchromosome CDS2363022 1044 - 0.627395
NA Rru_A2699 Ribosomal protein L11chromosome CDS3123721 429 - 0.629371
NA Rru_A2954 Glycine--tRNA ligasechromosome CDS3402562 888 + 0.648649
NA Rru_A3351 Methionyl-tRNA formyltransferasechromosome CDS3864838 930 + 0.702151
NA Rru_A2696 Ribosomal protein L7/L12chromosome CDS3121696 372 - 0.615591
NA Rru_A0751 Modification methylase HemKchromosome CDS880072 978 + 0.712679
NA Rru_A3781 Initiation factor 2chromosome CDS4329955 2622 + 0.666667
NA Rru_A2818 Alanine--tRNA ligasechromosome CDS3249244 2652 - 0.673454
NA Rru_A1185 Ribosomal protein S16chromosome CDS1403752 375 + 0.698667
NA Rru_A0245 Ribosomal RNA methyltransferase RrmJ/FtsJchromosome CDS304661 792 - 0.67298
NA Rru_A0210 Ribosomal protein L28chromosome CDS262704 300 - 0.653333
NA Rru_A2666 Ribosomal protein S13chromosome CDS3096259 369 - 0.601626
NA Rru_A0075 RNA-binding S4chromosome CDS88991 435 + 0.714943
NA Rru_A3205 Ribosomal protein L33chromosome CDS3696846 168 + 0.571429
NA Rru_A2024 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2337841 1134 - 0.702822
NA Rru_A1077 Elongation factor Pchromosome CDS1268670 564 - 0.585106
NA Rru_A1186 16S rRNA processing protein RimMchromosome CDS1404248 606 + 0.665016
NA Rru_A0293 Ribosomal protein S1chromosome CDS358078 1722 - 0.634727
NA Rru_A2457 Endoribonuclease L-PSPchromosome CDS2855844 462 + 0.666667
NA Rru_A0733 Peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS860118 816 - 0.613971
NA Rru_A2674 Ribosomal protein S8chromosome CDS3101161 399 - 0.629073
NA Rru_A1044 Peptide deformylasechromosome CDS1236659 510 + 0.65098
NA Rru_A2467 Ribosomal protein L36chromosome CDS2866924 177 - 0.632768
NA Rru_A3746 Ribosomal protein L25chromosome CDS4294818 633 + 0.652449
NA Rru_A1939 Pseudouridine synthase, Rsuchromosome CDS2246881 600 + 0.703333
NA Rru_A2151 Ribosomal protein S9chromosome CDS2500053 477 - 0.66457
NA Rru_A3196 Plasmid stabilization systemchromosome CDS3684403 270 + 0.603704
NA Rru_A0444 Sua5/YciO/YrdC/YwlCchromosome CDS522974 969 - 0.749226
NA Rru_A1586 Ribosomal protein S2chromosome CDS1870364 789 + 0.629911
NA Rru_A3641 Ribonuclease PHchromosome CDS4182078 723 - 0.672199
NA Rru_A2697 Ribosomal protein L10chromosome CDS3122126 519 - 0.630058
NA Rru_A1757 Gid proteinchromosome CDS2050135 1449 + 0.68254
NA Rru_A3177 Glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS3669787 288 - 0.625
NA Rru_A3802 Ribosomal protein S20pchromosome CDS4352015 267 + 0.632959
NA Rru_A0360 Initiation factor 2B alpha/beta/deltachromosome CDS434241 1173 - 0.697357
NA Rru_A0466 tRNA isopentenyltransferasechromosome CDS546394 981 + 0.707441
NA Rru_A2703 RNA methyltransferase TrmH, group 3chromosome CDS3127112 1047 + 0.726839
NA Rru_A3487 Threonyl-tRNA synthetase, class IIachromosome CDS4012361 1932 + 0.641822
NA Rru_A1796 Valyl-tRNA synthetase, class Iachromosome CDS2088061 2640 - 0.646591
NA Rru_A2677 Ribosomal protein L24chromosome CDS3102447 321 - 0.64486
NA Rru_A3350 Peptide deformylasechromosome CDS3864323 519 + 0.608863
NA Rru_A0074 Helicase-likechromosome CDS85794 3201 + 0.690097
NA Rru_A2679 Ribosomal protein S17chromosome CDS3103201 240 - 0.525
NA Rru_A2072 Aspartyl-tRNA synthetasechromosome CDS2397395 1821 - 0.637013
NA Rru_A3734 Glutamyl-tRNA synthetase, class Icchromosome CDS4284486 882 + 0.701814
NA Rru_A3436 Nucleotidyl transferasechromosome CDS3958953 762 - 0.66273
NA Rru_A1676 Dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS1965546 1089 + 0.710744
NA Rru_A2692 Ribosomal protein S7chromosome CDS3111709 471 - 0.615711
NA Rru_A3336 Ribosomal protein L34chromosome CDS3849462 135 + 0.674074
NA Rru_A3212 conserved hypothetical proteinchromosome CDS3702360 771 - 0.612192
NA Rru_A2678 Ribosomal protein L14chromosome CDS3102767 369 - 0.601626
NA Rru_A3770 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS4318290 1404 + 0.661681
NA Rru_A0701 Ribosomal protein S4chromosome CDS830110 615 + 0.595122
NA Rru_A0431 16S rRNA dimethylasechromosome CDS503183 867 - 0.712803
NA Rru_A2693 Ribosomal protein S12chromosome CDS3112195 372 - 0.61828
NA Rru_A3660 tRNA and rRNA cytosine-C5-methylasechromosome CDS4201854 1317 - 0.730448
NA Rru_A3450 Ribonuclease T2chromosome CDS3973519 1071 + 0.718021
NA Rru_A3649 2',5' RNA ligasechromosome CDS4188468 600 - 0.661667
NA Rru_A2686 Ribosomal L23 proteinchromosome CDS3106296 315 - 0.606349
NA Rru_A2682 ribosomal protein S3chromosome CDS3104108 672 - 0.633929
NA Rru_A0097 Class I peptide chain release factorchromosome CDS111258 423 - 0.673759
NA Rru_A1182 MiaB-like tRNA modifying enzymechromosome CDS1399551 1326 - 0.695324
NA Rru_A0552 GCN5-related N-acetyltransferasechromosome CDS652820 630 - 0.668254
NA Rru_A0414 Ribosomal protein S6chromosome CDS490754 483 - 0.63354
NA Rru_A0421 hypothetical proteinchromosome CDS496749 327 - 0.633027
NA Rru_A2687 Ribosomal protein L4/L1echromosome CDS3106607 621 - 0.63124
NA Rru_A3176 Glutamyl-tRNA(Gln) amidotransferase A subunitchromosome CDS3668276 1503 - 0.673985
NA Rru_A1779 Arginine--tRNA ligasechromosome CDS2070080 1779 - 0.657111
NA Rru_A1701 Methionyl-tRNA synthetase, class Iachromosome CDS1990869 1560 - 0.650641
NA Rru_A0696 RNA methyltransferase TrmH, group 1chromosome CDS825410 840 + 0.664286
NA Rru_A0281 Queuosine biosynthesis proteinchromosome CDS345720 1038 - 0.681118
NA Rru_A1601 Glutamyl-tRNA synthetasechromosome CDS1886099 1407 - 0.66027
NA Rru_A3179 GCN5-related N-acetyltransferasechromosome CDS3670725 627 - 0.674641
NA Rru_A2152 Ribosomal protein L13chromosome CDS2500533 465 - 0.608602
NA Rru_A1111 Pseudouridine synthase, RluDchromosome CDS1306656 1032 - 0.625
NA Rru_A3748 conserved hypothetical proteinchromosome CDS4296213 1104 + 0.643116
NA Rru_A0280 Queuine tRNA-ribosyltransferasechromosome CDS344596 1128 - 0.675532
NA Rru_A2684 Ribosomal protein S19chromosome CDS3105162 279 - 0.577061
NA Rru_A2227 GCN5-related N-acetyltransferasechromosome CDS2586494 531 + 0.561205
NA Rru_A2681 Ribosomal protein L16chromosome CDS3103672 417 - 0.64988
NA Rru_A2688 Ribosomal protein L3chromosome CDS3107234 708 - 0.649718
NA Rru_A1770 Serine--tRNA ligasechromosome CDS2062286 1272 - 0.671384
NA Rru_A2149 Ribonuclease E and Gchromosome CDS2496163 2670 + 0.673408
NA Rru_A3730 asparaginasechromosome CDS4281965 519 + 0.645472
NA Rru_A3784 Ribosomal protein S15chromosome CDS4334285 270 + 0.57037
NA Rru_A3631 Leucyl-tRNA synthetase, class Iachromosome CDS4171032 2589 - 0.658555
NA Rru_A1178 Anticodon-bindingchromosome CDS1394721 1164 + 0.737113
NA Rru_A1078 tRNA synthetase, class II (D, K and N)chromosome CDS1269339 1077 + 0.686165
NA Rru_A3780 Protein of unknown function DUF448chromosome CDS4328991 792 + 0.69697
NA Rru_A1711 Endoribonuclease L-PSPchromosome CDS2003823 408 + 0.644608
NA Rru_A0503 Lysine--tRNA ligasechromosome CDS591916 1653 + 0.626739
NA Rru_A1587 elongation factor Tschromosome CDS1871368 930 + 0.664516
NA Rru_A2620 Hemolysin Achromosome CDS3048958 795 + 0.693082
NA Rru_A0411 Ribosomal protein L9chromosome CDS488893 588 - 0.64966
NA Rru_A2671 Ribosomal protein S5chromosome CDS3099629 600 - 0.678333
NA Rru_A2669 Ribosomal protein L15chromosome CDS3098920 489 - 0.654397
NA Rru_A3785 3' exoribonucleasechromosome CDS4334832 2127 + 0.64551
NA Rru_A3783 tRNA pseudouridine synthase Bchromosome CDS4333312 927 + 0.644013
NA Rru_A0413 Ribosomal protein S18chromosome CDS490521 237 - 0.64557
NA Rru_A3690 Glutathione synthetasechromosome CDS4236261 957 - 0.625914
NA Rru_A0689 Cysteine--tRNA ligasechromosome CDS814140 1380 + 0.663043
NA Rru_A2107 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS2442015 1398 + 0.740343
NA Rru_A1174 Endoribonuclease L-PSPchromosome CDS1390698 345 + 0.652174
NA Rru_A2032 Tyrosyl-tRNA synthetase, class Ibchromosome CDS2344729 1257 + 0.666667
NA Rru_A1662 SmpA/OmlAchromosome CDS1954240 468 - 0.589744
NA Rru_A0750 Peptide chain release factor 1chromosome CDS879011 1065 + 0.680751
NA Rru_A2966 Isoleucyl-tRNA synthetase, class Iachromosome CDS3415796 2823 + 0.656394
NA Rru_A3352 Pseudouridylate synthasechromosome CDS3865771 837 + 0.678614
NA Rru_A2073 Ribonuclease Dchromosome CDS2399339 1161 + 0.654608
NA Rru_A3372 tRNA/rRNA methyltransferase (SpoU)chromosome CDS3888170 612 + 0.655229
NA Rru_A3522 Ribosomal protein L20chromosome CDS4053693 378 + 0.640212
NA Rru_A2497 Peptide chain release factor 3chromosome CDS2903546 1593 - 0.632768
NA Rru_A1665 Ribosomal protein S32chromosome CDS1956259 186 + 0.607527
NA Rru_A0519 hypothetical proteinchromosome CDS612937 189 - 0.661376
NA Rru_A0073 ribosomal subunit interface protein, putativechromosome CDS85297 381 + 0.538058
NA Rru_A0015 3'-5' exonucleasechromosome CDS16232 621 - 0.647343
NA Rru_A1241 Ribosomal protein L27chromosome CDS1464508 258 - 0.612403
NA Rru_A2866 Ribosomal protein L11 methyltransferasechromosome CDS3300435 894 - 0.671141
NA Rru_A1140 Elongation factor Gchromosome CDS1344652 2016 + 0.65377
NA Rru_A3521 Ribosomal protein L35chromosome CDS4053441 198 + 0.560606
NA Rru_A2689 Ribosomal protein S10chromosome CDS3107969 309 - 0.61165
NA Rru_A2672 Ribosomal protein L18chromosome CDS3100239 363 - 0.628099
NA Rru_A1915 DEAD/DEAH box helicasechromosome CDS2219219 1182 + 0.65736
NA Rru_A1242 Ribosomal protein L21chromosome CDS1464820 303 - 0.623762
NA Rru_A2040 Peptide chain release factor 2chromosome CDS2359390 969 - 0.615067
NA Rru_A2675 Ribosomal protein S14chromosome CDS3101576 306 - 0.614379
NA Rru_A3535 Tryptophanyl-tRNA synthetase, class Ibchromosome CDS4066271 999 - 0.635636
NA Rru_A0365 tRNA/rRNA methyltransferase (SpoU)chromosome CDS439510 483 + 0.63354
NA Rru_A0650 Cytidine/deoxycytidylate deaminase, zinc-binding regionchromosome CDS771381 480 - 0.70625
NA Rru_A3782 Ribosome-binding factor Achromosome CDS4332821 495 + 0.69899
NA Rru_A2665 Ribosomal protein S11chromosome CDS3095776 390 - 0.635897
NA Rru_A2767 ribonuclease G (RNase G)chromosome CDS3201617 1383 - 0.757773
NA Rru_A2705 hypothetical proteinchromosome CDS3128927 246 + 0.581301
NA Rru_A1576 Prolyl-tRNA synthetasechromosome CDS1856768 1308 + 0.63685
NA Rru_A0366 Polynucleotide adenylyltransferase regionchromosome CDS439994 1578 - 0.725602
NA Rru_A0748 Histidyl-tRNA synthetase, class IIachromosome CDS876421 1248 + 0.677083
NA Rru_A1386 DEAD/DEAH box helicasechromosome CDS1636167 2034 + 0.702065
NA Rru_A0243 tRNA/rRNA cytosine-C5-methylasechromosome CDS301475 1365 - 0.706227