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2024-04-28 22:12:35

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Salinibacter ruber DSM 13855, DSM 13855; M31

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salinibacter ruber DSM 13855, DSM 13855; M31
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SRU_0882 rRNA methylasechromosome CDS1125454 744 + 0.712366
NA SRU_1323 probable cytidine deaminasechromosome CDS1666436 714 - 0.655462
NA SRU_1787 ribosomal protein S1, putativechromosome CDS2207688 2616 - 0.646407
NA SRU_1340 CRS1 / YhbY domain superfamilychromosome CDS1687865 324 + 0.700617
NA SRU_2518 putative cytidine and deoxycytidylate deaminasechromosome CDS3131243 666 + 0.71021
NA SRU_1582 conserved hypothetical proteinchromosome CDS1965323 819 - 0.699634
NA SRU_1325 nucleotidyl transferase, putativechromosome CDS1668363 882 - 0.71542
NA SRU_2436 tRNA nucleotidyltransferase/poly(A) polymerase family proteinchromosome CDS3042992 1785 + 0.693557
NA SRU_1356 acetyltransferase, gnat family, putativechromosome CDS1704921 759 + 0.631094
NA SRU_1902 glutamyl-tRNAchromosome CDS2346090 1527 + 0.684348
NA SRU_2329 glutathione synthasechromosome CDS2903056 948 - 0.687764
NA SRU_0813 peptidyl-tRNA hydrolasechromosome CDS1036035 567 - 0.698413
NA SRU_1700 conserved hypothetical proteinchromosome CDS2107578 348 + 0.66954
NA SRU_1327 conserved hypothetical proteinchromosome CDS1670282 333 - 0.645646
NA SRU_1790 SpoU rRNA methylase family proteinchromosome CDS2211984 564 + 0.640071
NA SRU_1939 conserved hypothetical proteinchromosome CDS2397738 1290 - 0.717054
NA SRU_2463 conserved hypothetical proteinchromosome CDS3069528 735 + 0.704762
NA SRU_2843 hypothetical proteinchromosome CDS3516412 957 + 0.633229
NA SRU_0140 hypothetical proteinchromosome CDS188299 1044 + 0.692529
NA SRU_1365 30S ribosomal protein S6chromosome CDS1715034 609 + 0.600985
NA SRU_1795 glutaminyl-tRNA synthetasechromosome CDS2218611 2367 + 0.672159
NA SRU_0414 Amidase, putativechromosome CDS558409 1584 - 0.732955
NA SRU_2495 endoribonuclease L-PSP, putativechromosome CDS3100999 399 + 0.64411
NA SRU_1090 RhoA-specific guanine exchange factorchromosome CDS1371436 267 - 0.576779
NA SRU_0504 putative RNA methyltransferasechromosome CDS676772 939 - 0.729499
NA SRU_1284 conserved hypothetical proteinchromosome CDS1620792 360 + 0.575
NA SRU_1597 SUA5 proteinchromosome CDS1985006 993 - 0.704935
NA SRU_0274 collagen a1chromosome CDS368061 1278 + 0.685446
NA SRU_1461 RNA methyltransferase, TrmH family, group 3chromosome CDS1820639 762 + 0.707349
NA SRU_0489 ribonuclease, Rne/Rng family subfamilychromosome CDS664474 1791 + 0.659408
NA SRU_2011 putative transposase, orfAchromosome CDS2489797 471 - 0.598726
NA SRU_0714 Ribosomal protein S10p/S20e, putativechromosome CDS923101 717 + 0.680614
NA SRU_1047 50S ribosomal protein L5chromosome CDS1326329 576 + 0.640625
NA SRU_0603 formyltransferase, putativechromosome CDS793870 897 + 0.539576
NA SRU_0817 translation initiation factor eIF-2B alpha subunitchromosome CDS1038837 1341 - 0.719612
NA SRU_1044 30S ribosomal protein S17chromosome CDS1325009 309 + 0.585761
NA SRU_1058 30S ribosomal protein S11chromosome CDS1332972 477 + 0.631027
NA SRU_0797 acetyltransferase, gnat familychromosome CDS1011372 591 - 0.668359
NA SRU_0671 Amidase, putativechromosome CDS875168 1545 - 0.698382
NA SRU_2744 conserved hypothetical proteinchromosome CDS3393684 1449 - 0.730849
NA SRU_0054 hypothetical proteinchromosome CDS49795 441 + 0.709751
NA SRU_2698 hypothetical proteinchromosome CDS3336517 597 + 0.703518
NA SRU_1568 2'-5' RNA ligasechromosome CDS1950792 540 + 0.683333
NA SRU_1655 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS2054038 1791 - 0.696259
NA SRU_1762 ribosomal protein L11, putativechromosome CDS2179834 597 - 0.624791
NA SRU_0814 50S ribosomal protein L25chromosome CDS1036702 753 - 0.653386
NA SRU_0046 ATP-dependent RNA helicasechromosome CDS41983 1437 + 0.658316
NA SRU_2804 conserved domain proteinchromosome CDS3461613 348 + 0.603448
NA SRU_2519 NifR3 family enzymechromosome CDS3132058 1332 - 0.662162
NA SRU_2540 conserved hypothetical proteinchromosome CDS3155346 1035 - 0.651208
NA SRU_0471 hypothetical proteinchromosome CDS636458 375 - 0.637333
NA SRU_2645 hypothetical proteinchromosome CDS3274248 1092 + 0.75641
NA SRU_1653 Queuosine biosynthesis proteinchromosome CDS2051801 1050 - 0.615238
alaS SRU_1544 alanyl-tRNA synthetasechromosome CDS1923136 2901 - 0.670803
ansA SRU_1709 L-asparaginasechromosome CDS2118242 1089 - 0.704316
argS SRU_0986 arginyl-tRNA synthetasechromosome CDS1258846 1689 - 0.674956
asnS SRU_1832 asparaginyl-tRNA synthetasechromosome CDS2266701 1635 - 0.661774
aspS SRU_1963 aspartyl-tRNA synthetasechromosome CDS2428395 1890 + 0.693122
cysS SRU_1014 cysteinyl-tRNA synthetasechromosome CDS1294327 1710 - 0.676023
def SRU_1291 peptide deformylasechromosome CDS1629197 588 + 0.646259
dtd SRU_1171 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS1477217 453 - 0.690949
efp SRU_0935 translation elongation factor Pchromosome CDS1199939 579 + 0.64076
fmt SRU_2171 methionyl-tRNA formyltransferasechromosome CDS2686024 924 - 0.715368
frr SRU_0033 ribosome recycling factorchromosome CDS30705 570 - 0.615789
fus SRU_1150 elongation factor Gchromosome CDS1447095 2124 - 0.666196
fusA SRU_1032 translation elongation factor Gchromosome CDS1315666 2121 + 0.635549
gatC SRU_1282 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS1619807 288 + 0.638889
gltX SRU_1796 glutamyl-tRNA synthetasechromosome CDS2221011 1521 - 0.659435
glyS SRU_2334 glycyl-tRNA synthetasechromosome CDS2908804 1539 - 0.642625
hemK SRU_2066 hemK proteinchromosome CDS2562919 912 - 0.708333
hisS SRU_0839 histidyl-tRNA synthetasechromosome CDS1069525 1308 + 0.685015
ileS SRU_0456 isoleucyl-tRNA synthetasechromosome CDS611236 3243 + 0.66975
infA SRU_1056 translation initiation factor IF-1chromosome CDS1332263 222 + 0.527027
infB SRU_1777 translation initiation factor IF-2chromosome CDS2194527 3090 - 0.653722
infC SRU_2803 translation initiation factor IF-3chromosome CDS3461133 462 + 0.627706
ksgA SRU_2194 dimethyladenosine transferasechromosome CDS2718012 891 - 0.683502
leuS SRU_0933 leucyl-tRNA synthetasechromosome CDS1196295 2592 + 0.662037
lysS SRU_0905 lysyl-tRNA synthetasechromosome CDS1162313 1545 + 0.651133
map SRU_1055 methionine aminopeptidase, type Ichromosome CDS1331439 825 + 0.621818
miaA SRU_1498 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1866556 975 - 0.633846
miaB SRU_2575 tRNA-i(6)A37 thiotransferase enzyme MiaBchromosome CDS3198996 1719 + 0.666085
pheS SRU_2806 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS3462777 1011 + 0.657765
pnp SRU_1773 polyribonucleotide nucleotidyltransferasechromosome CDS2190178 2169 - 0.643154
prfA SRU_1364 peptide chain release factor 1chromosome CDS1713883 1074 + 0.640596
prfB SRU_1780 peptide chain release factor 2chromosome CDS2201200 1137 - 0.620053
prfC SRU_1658 peptide chain release factor 3chromosome CDS2058480 1602 - 0.644819
prmA SRU_0823 ribosomal protein L11 methyltransferasechromosome CDS1045360 843 - 0.692764
proS SRU_2541 prolyl-tRNA synthetasechromosome CDS3156711 1584 - 0.661616
rbfA SRU_1776 ribosome-binding factor Achromosome CDS2194052 399 - 0.616541
rimM SRU_1628 16S rRNA processing protein RimMchromosome CDS2024200 597 - 0.663317
rluA SRU_1743 ribosomal large subunit pseudouridine synthase Achromosome CDS2154564 699 - 0.701001
rluB SRU_1495 ribosomal large subunit pseudouridine synthase Bchromosome CDS1861703 750 + 0.633333
rluD SRU_1189 ribosomal large subunit pseudouridine synthase Dchromosome CDS1501033 1050 + 0.692381
rpS SRU_1048 ribosomal protein S14chromosome CDS1326979 270 + 0.607407
rplA SRU_1761 ribosomal protein L1chromosome CDS2179000 714 - 0.645658
rplB SRU_1038 ribosomal protein L2chromosome CDS1321747 852 + 0.659624
rplC SRU_1035 ribosomal protein L3chromosome CDS1319991 627 + 0.633174
rplD SRU_1036 ribosomal protein L4/L1 familychromosome CDS1320691 648 + 0.654321
rplF SRU_1050 ribosomal protein L6chromosome CDS1327811 555 + 0.621622
rplI SRU_1367 ribosomal protein L9chromosome CDS1715958 450 + 0.624444
rplJ SRU_1760 ribosomal protein L10chromosome CDS2178412 537 - 0.629423
rplL SRU_1759 ribosomal protein L7/L12chromosome CDS2177890 384 - 0.622396
rplM SRU_0038 ribosomal protein L13chromosome CDS34873 471 - 0.636943
rplN SRU_1045 ribosomal protein L14chromosome CDS1325402 369 + 0.634146
rplO SRU_1053 ribosomal protein L15chromosome CDS1329478 501 + 0.640719
rplP SRU_1042 ribosomal protein L16chromosome CDS1324254 438 + 0.634703
rplQ SRU_1061 ribosomal protein L17chromosome CDS1335330 594 + 0.661616
rplR SRU_1051 ribosomal protein L18chromosome CDS1328441 360 + 0.633333
rplS SRU_1626 ribosomal protein L19chromosome CDS2023011 357 - 0.638655
rplT SRU_2805 ribosomal protein L20chromosome CDS3462117 348 + 0.62931
rplU SRU_1420 ribosomal protein L21chromosome CDS1775742 519 - 0.614644
rplV SRU_1040 ribosomal protein L22chromosome CDS1323056 366 + 0.661202
rplW SRU_1037 ribosomal protein L23chromosome CDS1321395 300 + 0.6
rplX SRU_1046 ribosomal protein L24chromosome CDS1325860 336 + 0.625
rpmA SRU_1419 ribosomal protein L27chromosome CDS1775432 261 - 0.624521
rpmB SRU_0021 ribosomal protein L28chromosome CDS22022 237 + 0.586498
rpmC SRU_1043 ribosomal protein L29chromosome CDS1324700 249 + 0.586345
rpmE SRU_1162 ribosomal protein L31chromosome CDS1463613 255 + 0.619608
rpmF SRU_0040 ribosomal protein L32chromosome CDS36363 198 + 0.616162
rpmG SRU_0022 ribosomal protein L33chromosome CDS22333 165 + 0.563636
rpmH SRU_0053 conserved domain proteinchromosome CDS49558 225 + 0.582222
rpsB SRU_0036 ribosomal protein S2chromosome CDS33185 1095 - 0.630137
rpsC SRU_1041 ribosomal protein S3chromosome CDS1323483 711 + 0.658228
rpsD SRU_1059 ribosomal protein S4chromosome CDS1333558 603 + 0.603648
rpsE SRU_1052 ribosomal protein S5chromosome CDS1328851 528 + 0.643939
rpsG SRU_1031 ribosomal protein S7chromosome CDS1315119 474 + 0.635021
rpsH SRU_1049 ribosomal protein S8chromosome CDS1327342 402 + 0.59204
rpsI SRU_0037 ribosomal protein S9chromosome CDS34420 399 - 0.666667
rpsJ SRU_1034 ribosomal protein S10chromosome CDS1319147 312 + 0.599359
rpsL SRU_1030 ribosomal protein S12chromosome CDS1314619 453 + 0.649007
rpsM SRU_1057 ribosomal protein S13p/S18echromosome CDS1332573 384 + 0.622396
rpsO SRU_1774 ribosomal protein S15chromosome CDS2192458 267 - 0.539326
rpsP SRU_1629 ribosomal protein S16chromosome CDS2024826 618 - 0.68932
rpsR SRU_1366 ribosomal protein S18chromosome CDS1715696 213 + 0.619718
rpsS SRU_1039 ribosomal protein S19chromosome CDS1322674 294 + 0.598639
rpsT SRU_0907 ribosomal protein S20chromosome CDS1165441 321 - 0.576324
serS SRU_1855 seryl-tRNA synthetasechromosome CDS2291084 1287 + 0.668998
sun SRU_0884 ribosomal RNA small subunit methyltransferase Bchromosome CDS1129132 1284 + 0.725857
thrS SRU_2802 threonyl-tRNA synthetasechromosome CDS3458810 2085 + 0.671463
trmD SRU_1627 tRNA (guanine-N1)-methyltransferasechromosome CDS2023429 726 - 0.670799
trmU SRU_2494 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS3099615 1152 - 0.663194
trpS SRU_1664 tryptophanyl-tRNA synthetasechromosome CDS2067116 1035 + 0.667633
truA SRU_0664 tRNA pseudouridine synthase Achromosome CDS867693 798 + 0.730576
tsf SRU_0035 translation elongation factor Tschromosome CDS32287 831 - 0.666667
tuf SRU_1033 translation elongation factor Tuchromosome CDS1317874 1191 + 0.639798
tuf SRU_1766 translation elongation factor Tuchromosome CDS2181463 1191 - 0.63644
tyrS SRU_1623 tyrosyl-tRNA synthetasechromosome CDS2020196 1239 - 0.672316
valS SRU_2044 valyl-tRNA synthetasechromosome CDS2528211 2706 - 0.667406
ychF SRU_0017 GTP-binding protein YchFchromosome CDS17091 1203 + 0.651704
yfiA SRU_2093 ribosomal subunit interface proteinchromosome CDS2589151 399 + 0.614035