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2024-04-29 12:19:36

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380

Number of genes found: 179

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pelobacter carbinolicus DSM 2380, DSM 2380
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pcar_1434 ribosomal protein L32chromosome CDS1681429 177 + 0.531073
NA Pcar_0405 gid proteinchromosome CDS495259 1380 - 0.618841
NA Pcar_0705 probable 30S ribosomal protein S19chromosome CDS855695 276 + 0.478261
NA Pcar_0685 RNA methyltransferase, TrmH family, group 3chromosome CDS833793 741 + 0.580297
NA Pcar_1301 ribosomal large subunit pseudouridine synthase Bchromosome CDS1522362 711 + 0.587904
NA Pcar_2348 tyrosyl-tRNA synthetasechromosome CDS2757915 1227 - 0.539527
NA Pcar_0707 ribosomal protein S3chromosome CDS856356 633 + 0.515008
NA Pcar_1920 elongation factor EF-Tschromosome CDS2235626 912 - 0.51864
NA Pcar_1561 polyribonucleotide nucleotidyltransferasechromosome CDS1825757 2100 + 0.535238
NA Pcar_2169 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS2529861 1437 + 0.583159
NA Pcar_1469 HDIG domain proteinchromosome CDS1716771 573 + 0.586387
NA Pcar_0742 arginyl-tRNA synthetasechromosome CDS880526 1665 + 0.565165
NA Pcar_0583 probable peptide chain release factor 3chromosome CDS706339 1587 + 0.570888
NA Pcar_1132 glucose-1-phosphate cytidylyltransferasechromosome CDS1330085 777 - 0.472329
NA Pcar_0727 ribosomal protein S4chromosome CDS865700 630 + 0.539683
NA Pcar_1041 histidyl-tRNA synthetasechromosome CDS1219472 1260 - 0.585714
NA Pcar_0690 ribosomal protein L11chromosome CDS837716 423 + 0.508274
NA Pcar_0550 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)-likechromosome CDS672912 564 + 0.578014
NA Pcar_1418 threonyl-tRNA synthetasechromosome CDS1666242 1917 + 0.535211
NA Pcar_1858 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2173377 1059 - 0.585458
NA Pcar_1901 tRNA pseudouridine synthase Achromosome CDS2215867 759 - 0.603426
NA Pcar_0101 glutaminyl-tRNA synthetasechromosome CDS122438 1719 - 0.589878
NA Pcar_2369 RNA methyltransferase, TrmA familychromosome CDS2790232 1470 + 0.59932
NA Pcar_0699 translation elongation factor Tuchromosome CDS851687 1200 + 0.549167
NA Pcar_0599 glycyl-tRNA synthetase, beta subunitchromosome CDS728401 2067 + 0.577165
NA Pcar_3044 hypothetical proteinchromosome CDS3557962 300 - 0.57
NA Pcar_1555 translation initiation factor IF-2chromosome CDS1819796 2844 + 0.542897
NA Pcar_1645 polyA polymerase family proteinchromosome CDS1918684 1317 - 0.557327
NA Pcar_1998 Ribosomal protein S18-likechromosome CDS2330034 276 - 0.557971
NA Pcar_2532 Protein chain release factor B-likechromosome CDS2975211 324 - 0.614198
NA Pcar_1288 endoribonuclease L-PSP, putativechromosome CDS1510030 387 + 0.571059
NA Pcar_1420 probable 50S ribosomal protein L35chromosome CDS1668787 198 + 0.464646
NA Pcar_0735 ATP-dependent RNA helicase RhlBchromosome CDS872856 1302 + 0.549155
NA Pcar_1705 conserved hypothetical proteinchromosome CDS1990253 276 - 0.481884
NA Pcar_0696 probable 30S ribosomal protein S12chromosome CDS848680 372 + 0.548387
NA Pcar_1214 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS1421571 1317 + 0.568717
NA Pcar_1419 translation initiation factor IF-3chromosome CDS1668245 441 + 0.526077
NA Pcar_2255 ribosomal protein S21chromosome CDS2634205 195 - 0.471795
NA Pcar_2003 50S ribosomal protein L25chromosome CDS2334683 627 - 0.547049
NA Pcar_2672 ribosomal protein S1chromosome CDS3123315 1200 - 0.585
NA Pcar_0687 ribosomal protein L33chromosome CDS836601 180 + 0.511111
NA Pcar_1999 ribosomal protein S6chromosome CDS2330361 348 - 0.525862
NA Pcar_0713 ribosomal protein L5chromosome CDS858657 555 + 0.486486
NA Pcar_0718 ribosomal protein S5chromosome CDS860804 492 + 0.534553
NA Pcar_1550 RNA methyltransferase, TrmH family, group 1chromosome CDS1815194 735 + 0.553742
NA Pcar_0501 6-aminohexanoate-cyclic-dimer hydrolasechromosome CDS610640 1512 + 0.536376
NA Pcar_2692 peptide chain release factor 1chromosome CDS3144351 1071 - 0.579832
NA Pcar_1694 methionyl-tRNA synthetasechromosome CDS1977740 1536 + 0.547526
NA Pcar_2584 ribonuclease Gchromosome CDS3031637 1512 - 0.553571
NA Pcar_1421 ribosomal protein L20chromosome CDS1669093 357 + 0.515406
NA Pcar_1969 translation elongation factor Gchromosome CDS2290361 2079 - 0.542088
NA Pcar_1848 dimethyladenosine transferasechromosome CDS2162787 795 - 0.574843
NA Pcar_1416 ribosomal protein S20chromosome CDS1663855 264 - 0.537879
NA Pcar_0715 ribosomal protein S8chromosome CDS859429 399 + 0.496241
NA Pcar_0706 ribosomal protein L22chromosome CDS856005 333 + 0.546547
NA Pcar_0693 ribosomal protein L7/L12chromosome CDS839667 384 + 0.546875
NA Pcar_2170 translation initiation factor, putative, aIF-2BI familychromosome CDS2531411 1035 + 0.633816
NA Pcar_1058 rRNA methylase-likechromosome CDS1244950 759 + 0.592885
NA Pcar_1899 ribosomal protein S9chromosome CDS2214925 393 - 0.53944
NA Pcar_1557 ribosome-binding factor Achromosome CDS1822957 360 + 0.519444
NA Pcar_2039 ribonuclease, Rne/Rng family proteinchromosome CDS2370354 2781 + 0.565983
NA Pcar_2221 tRNA (guanine-N1)-methyltransferasechromosome CDS2593962 744 - 0.577957
NA Pcar_1937 ribosomal subunit interface proteinchromosome CDS2251822 549 - 0.477231
NA Pcar_1305 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1528910 945 + 0.539683
NA Pcar_0528 hypothetical proteinchromosome CDS638283 291 + 0.412371
NA Pcar_1626 hypothetical proteinchromosome CDS1901010 351 - 0.441595
NA Pcar_2950 ribosomal large subunit pseudouridine synthase Dchromosome CDS3454968 981 + 0.610601
NA Pcar_0034 MiaB-like tRNA modifying enzyme YliGchromosome CDS37919 1368 + 0.576023
NA Pcar_0326 seryl-tRNA synthetasechromosome CDS408304 1272 + 0.558962
NA Pcar_0682 prolyl-tRNA synthetasechromosome CDS830030 1716 + 0.555361
NA Pcar_1921 ribosomal protein S2chromosome CDS2236660 804 - 0.523632
NA Pcar_3146 ribosomal protein L34chromosome CDS3665480 153 - 0.529412
NA Pcar_1564 SUA5/YciO/YrdC/YwlC family proteinchromosome CDS1829652 615 + 0.507317
NA Pcar_2224 ribosomal protein S16chromosome CDS2595525 261 - 0.536398
NA Pcar_0709 50S ribosomal protein L29chromosome CDS857433 189 + 0.492063
NA Pcar_1554 ribosomal protein L7Ae family proteinchromosome CDS1819165 639 + 0.533646
NA Pcar_2583 ribosomal protein L21chromosome CDS3031126 309 - 0.514563
NA Pcar_2691 modification methylase, HemK familychromosome CDS3143485 864 - 0.625
NA Pcar_0570 ATP-dependent RNA helicase RhlEchromosome CDS694183 1299 + 0.599692
NA Pcar_0832 selenocysteine-specific translation elongation factorchromosome CDS981819 1914 + 0.579937
NA Pcar_0724 50S ribosomal protein L36chromosome CDS864769 114 + 0.447368
NA Pcar_1040 aspartyl-tRNA synthetasechromosome CDS1217542 1791 - 0.583473
NA Pcar_0723 methionine aminopeptidase, type Ichromosome CDS863934 747 + 0.554217
NA Pcar_0691 ribosomal protein L1chromosome CDS838165 702 + 0.525641
NA Pcar_2465 conserved hypothetical proteinchromosome CDS2902839 840 - 0.546429
NA Pcar_0642 exonuclease of the beta-lactamase fold involved in RNA processingchromosome CDS775053 1410 - 0.53617
NA Pcar_2698 tRNA synthetases class I (E and Q), catalytic domain proteinchromosome CDS3150324 936 - 0.608974
NA Pcar_1488 metallo-beta-lactamase family proteinchromosome CDS1741315 1503 + 0.552229
NA Pcar_2582 ribosomal protein L27chromosome CDS3030859 255 - 0.552941
NA Pcar_2694 ribosomal protein L31chromosome CDS3146285 210 - 0.504762
NA Pcar_2404 conserved hypothetical proteinchromosome CDS2829483 579 + 0.588946
NA Pcar_1996 ribosomal protein L9chromosome CDS2328593 447 - 0.494407
NA Pcar_1117 conserved hypothetical proteinchromosome CDS1313208 945 - 0.610582
NA Pcar_1894 queuine tRNA-ribosyltransferasechromosome CDS2208997 1068 - 0.559925
NA Pcar_2219 ribosomal protein L19chromosome CDS2593010 348 - 0.488506
NA Pcar_2167 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS2527914 288 + 0.541667
NA Pcar_1413 leucyl-tRNA synthetasechromosome CDS1659718 2556 + 0.539124
NA Pcar_2030 ribonuclease PHchromosome CDS2360574 735 - 0.583673
NA Pcar_0725 ribosomal protein S13chromosome CDS864904 369 + 0.550135
NA Pcar_0327 cytidine/deoxycytidylate deaminase family proteinchromosome CDS410113 480 + 0.58125
NA Pcar_1289 ribosomal protein L28chromosome CDS1510522 192 - 0.53125
NA Pcar_0323 ribonuclease D, putativechromosome CDS404724 1128 + 0.585993
NA Pcar_1900 ribosomal protein L13chromosome CDS2215347 429 - 0.519814
NA Pcar_2916 hypothetical proteinchromosome CDS3405032 1161 - 0.555556
NA Pcar_1857 MiaB-like tRNA modifying enzymechromosome CDS2172082 1299 - 0.591994
NA Pcar_3101 polyA polymerasechromosome CDS3617327 1329 + 0.622272
NA Pcar_2490 lysyl-tRNA synthetase-related proteinchromosome CDS2928451 915 + 0.597814
NA Pcar_0586 asparaginyl-tRNA synthetasechromosome CDS711163 1407 + 0.588486
NA Pcar_1882 ribosomal protein S1chromosome CDS2195202 1722 - 0.518583
NA Pcar_0328 ATP-dependent RNA helicase DeaDchromosome CDS410936 1752 + 0.593037
NA Pcar_0708 ribosomal protein L16chromosome CDS857018 426 + 0.523474
NA Pcar_0726 ribosomal protein S11chromosome CDS865284 396 + 0.515152
NA Pcar_0703 ribosomal protein L23chromosome CDS854525 288 + 0.5
NA Pcar_1650 glutamyl-tRNA synthetasechromosome CDS1926880 1401 - 0.528194
NA Pcar_1480 translation initation factor SUI1, putativechromosome CDS1727960 363 + 0.592287
NA Pcar_3100 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS3616283 981 - 0.59633
NA Pcar_0700 ribosomal protein S10chromosome CDS852898 309 + 0.485437
NA Pcar_0692 ribosomal protein L10chromosome CDS839082 519 + 0.527938
NA Pcar_3080 ribosomal protein L11 methyltransferasechromosome CDS3592751 924 - 0.603896
NA Pcar_2769 conserved hypothetical proteinchromosome CDS3227752 978 + 0.599182
NA Pcar_0717 ribosomal protein L18chromosome CDS860420 369 + 0.555556
NA Pcar_0197 translation elongation factor Gchromosome CDS252219 2076 - 0.612717
NA Pcar_0716 ribosomal protein L6chromosome CDS859854 540 + 0.52037
NA Pcar_1895 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS2210202 1032 - 0.567829
NA Pcar_2489 translation elongation factor Pchromosome CDS2927884 564 + 0.556738
NA Pcar_0660 cytidine and deoxycytidylate deaminase family proteinchromosome CDS798049 582 - 0.659794
NA Pcar_2455 isoleucyl-tRNA synthetasechromosome CDS2889925 2784 - 0.559267
NA Pcar_1637 conserved hypothetical protein TIGR00253chromosome CDS1913393 312 + 0.512821
NA Pcar_0588 probable tryptophanyl-tRNA ligasechromosome CDS713292 966 - 0.574534
NA Pcar_0697 ribosomal protein S7chromosome CDS849073 471 + 0.539278
NA Pcar_1878 conserved hypothetical proteinchromosome CDS2192138 906 - 0.540839
NA Pcar_0310 Cytosine/adenosine deaminases-likechromosome CDS389908 666 + 0.570571
NA Pcar_1560 ribosomal protein S15chromosome CDS1825286 267 + 0.460674
NA Pcar_0719 50S ribosomal protein L30chromosome CDS861320 180 + 0.494444
NA Pcar_0017 conserved hypothetical proteinchromosome CDS19795 519 + 0.533719
NA Pcar_2357 ribosomal large subunit pseudouridine synthase Cchromosome CDS2768861 891 + 0.588103
NA Pcar_2002 peptidyl-tRNA hydrolasechromosome CDS2334090 576 - 0.532986
NA Pcar_0245 polypeptide deformylasechromosome CDS307474 516 - 0.515504
NA Pcar_1422 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS1669568 1017 + 0.485742
NA Pcar_0711 ribosomal protein L14chromosome CDS857924 369 + 0.544715
NA Pcar_0720 ribosomal protein L15chromosome CDS861519 444 + 0.493243
NA Pcar_0100 cysteinyl-tRNA synthetasechromosome CDS120952 1446 - 0.569848
NA Pcar_2168 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS2528297 1458 + 0.613169
NA Pcar_2000 GTP binding protein YchFchromosome CDS2330870 1095 - 0.555251
NA Pcar_2534 polypeptide deformylasechromosome CDS2976163 504 + 0.569444
NA Pcar_0729 ribosomal protein L17chromosome CDS867431 468 + 0.555556
NA Pcar_1559 tRNA pseudouridine synthase Bchromosome CDS1824265 921 + 0.538545
NA Pcar_0701 ribosomal protein L3chromosome CDS853236 633 + 0.537125
NA Pcar_0712 ribosomal protein L24chromosome CDS858315 330 + 0.521212
NA Pcar_1106 hypothetical proteinchromosome CDS1302486 1014 - 0.532544
NA Pcar_1551 RNA methyltransferase, TrmA familychromosome CDS1815928 1305 + 0.563218
NA Pcar_1412 translation initiation factor IF-1chromosome CDS1659316 219 + 0.497717
NA Pcar_1452 RNA methyltransferase, TrmH family, group 2, putativechromosome CDS1696682 471 - 0.537155
NA Pcar_0368 ATP-dependent RNA helicase RhlEchromosome CDS457280 1308 + 0.594801
NA Pcar_1248 lysyl-tRNA synthetasechromosome CDS1466968 1485 + 0.534007
NA Pcar_0702 ribosomal protein L4chromosome CDS853905 621 + 0.521739
NA Pcar_2958 phosphoglucomutase/phosphomannomutase family proteinchromosome CDS3465713 2529 - 0.578885
NA Pcar_0598 glycyl-tRNA synthetase, alpha subunitchromosome CDS727451 873 + 0.536082
NA Pcar_2315 valyl-tRNA synthetasechromosome CDS2706026 2700 - 0.555926
NA Pcar_2310 ribosomal protein S6 modification proteinchromosome CDS2696867 906 + 0.582781
NA Pcar_0686 translation elongation factor Tuchromosome CDS835370 1200 + 0.549167
NA Pcar_1918 ribosome recycling factorchromosome CDS2234324 558 - 0.519713
NA Pcar_0202 histidyl-tRNA synthetase, putativechromosome CDS259587 1287 + 0.591298
NA Pcar_0241 Sun proteinchromosome CDS303257 1356 - 0.613569
NA Pcar_0244 methionyl-tRNA formyltransferasechromosome CDS306530 948 - 0.592827
NA Pcar_1777 conserved hypothetical proteinchromosome CDS2079667 297 - 0.488215
NA Pcar_2408 alanyl-tRNA synthetasechromosome CDS2832835 2571 + 0.62077
NA Pcar_1992 dihydrouridine synthase family proteinchromosome CDS2323418 1029 + 0.56171
NA Pcar_1228 queuine tRNA-ribosyltransferasechromosome CDS1439917 1110 - 0.567568
NA Pcar_3070 putative D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS3585355 450 - 0.622222
NA Pcar_1247 peptide chain release factor 2chromosome CDS1465855 981 + 0.529052
NA Pcar_3145 ribonuclease Pchromosome CDS3665102 366 - 0.502732
NA Pcar_0904 tRNA-dihydrouridine synthase-likechromosome CDS1068830 912 + 0.594298
NA Pcar_0710 ribosomal protein S17chromosome CDS857645 267 + 0.475655
NA Pcar_0698 translation elongation factor Gchromosome CDS849580 2079 + 0.535354
NA Pcar_0704 ribosomal protein L2chromosome CDS854846 822 + 0.553528
NA Pcar_3054 hypothetical proteinchromosome CDS3566711 300 - 0.553333
NA Pcar_0714 ribosomal protein S14chromosome CDS859223 186 + 0.516129
NA Pcar_2222 16S rRNA processing protein RimMchromosome CDS2594705 528 - 0.535985