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2024-05-06 14:47:40

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Carboxydothermus hydrogenoformans Z-2901, Z-2901

Number of genes found: 148

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Carboxydothermus hydrogenoformans Z-2901, Z-2901
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CHY_1469 ribosomal protein L28chromosome CDS1311653 189 + 0.402116
NA CHY_1984 hemolysin Achromosome CDS1773068 801 - 0.43196
NA CHY_2049 metallo-beta-lactamase family proteinchromosome CDS1834712 1515 - 0.409241
NA CHY_1122 RNA methyltransferase, TrmH family, group 2chromosome CDS996081 462 + 0.409091
NA CHY_2440 polyA polymerase/tRNA nucleotidyltransferase family proteinchromosome CDS2182950 1326 - 0.421569
NA CHY_0451 putative 2'-5' RNA ligasechromosome CDS395202 534 + 0.327715
NA CHY_2471 hypothetical proteinchromosome CDS2214723 423 - 0.458629
NA CHY_1573 RNA methyltransferase, TrmH family proteinchromosome CDS1415038 777 - 0.395109
NA CHY_2568 conserved hypothetical proteinchromosome CDS2287919 816 - 0.463235
NA CHY_2316 ribosomal protein L7ae family proteinchromosome CDS2078089 264 - 0.458333
NA CHY_2562 modification methylase, HemK familychromosome CDS2282606 858 - 0.513986
NA CHY_2650 hypothetical proteinchromosome CDS2347803 810 - 0.346914
NA CHY_1081 conserved hypothetical proteinchromosome CDS958255 1017 - 0.457227
NA CHY_1556 putative translation initiation factor, aIF-2BI familychromosome CDS1391496 1032 - 0.395349
NA CHY_2682 cytidine/deoxycytidylate deaminase family proteinchromosome CDS2376975 462 - 0.469697
NA CHY_0364 ribonuclease, Rne/Rng familychromosome CDS313214 1179 + 0.433418
NA CHY_1080 conserved hypothetical proteinchromosome CDS957163 999 - 0.443443
NA CHY_1400 conserved domain proteinchromosome CDS1254870 225 + 0.351111
NA CHY_2287 conserved hypothetical proteinchromosome CDS2062397 273 - 0.43956
NA CHY_2335 RNA methyltransferase, TrmH family, group 3chromosome CDS2092483 714 - 0.442577
NA CHY_2561 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS2281387 1029 - 0.487852
NA CHY_0042 conserved hypothetical proteinchromosome CDS34295 663 + 0.438914
NA CHY_1925 hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1chromosome CDS1724361 1962 - 0.436289
NA CHY_1505 ribosomal large subunit pseudouridine synthase, RluA familychromosome CDS1346661 918 - 0.406318
NA CHY_0253 endoribonuclease L-PSP family proteinchromosome CDS217349 459 + 0.492375
NA CHY_2369 putative TIM-barrel protein, NifR3 familychromosome CDS2123596 966 - 0.458592
NA CHY_1164 MiaB-like tRNA modifying enzyme YliG, TIGR01125chromosome CDS1037859 1317 + 0.359909
NA CHY_2029 NOL1/NOP2/sun family proteinchromosome CDS1812401 1350 - 0.417037
NA CHY_1767 ribosomal protein L7ae family proteinchromosome CDS1581375 315 - 0.377778
NA CHY_0229 ATP-dependent RNA helicase, DEAD box familychromosome CDS196711 1293 + 0.481052
NA CHY_0796 fdhE domain proteinchromosome CDS706649 735 + 0.331973
NA CHY_0419 MiaB-like tRNA modifying enzymechromosome CDS362572 1305 + 0.42682
NA CHY_1379 hypothetical proteinchromosome CDS1235852 207 - 0.381643
NA CHY_2460 endoribonuclease L-PSP family proteinchromosome CDS2205542 378 - 0.380952
NA CHY_1119 ribosomal large subunit pseudouridine synthase, RluA familychromosome CDS993948 906 - 0.415011
alaS CHY_0538 alanyl-tRNA synthetasechromosome CDS467080 2625 + 0.46019
argS CHY_0124 arginyl-tRNA synthetasechromosome CDS106601 1674 + 0.461768
aspS CHY_2204 aspartyl-tRNA synthetasechromosome CDS1984597 1779 - 0.462057
cysS CHY_2338 cysteinyl-tRNA synthetasechromosome CDS2094273 1398 - 0.405579
def CHY_1484 peptide deformylasechromosome CDS1324915 459 - 0.409586
dtd CHY_2222 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS2005536 438 - 0.452055
efp CHY_1872 translation elongation factor Pchromosome CDS1678352 558 - 0.444444
fmt CHY_1483 methionyl-tRNA formyltransferasechromosome CDS1323984 927 - 0.419633
frr CHY_1784 ribosome recycling factorchromosome CDS1597325 558 - 0.462366
fusA1 CHY_0961 translation elongation factor Gchromosome CDS849185 2019 + 0.449728
fusA2 CHY_2313 translation elongation factor Gchromosome CDS2075102 2079 - 0.466089
gatA CHY_1102 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS977010 1458 + 0.489712
gatB CHY_1103 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS978478 1446 + 0.456432
gatC CHY_1101 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS976711 285 + 0.396491
gidA2 CHY_1793 glucose inhibited division protein Achromosome CDS1603928 1302 - 0.43318
gltX CHY_2340 glutamyl-tRNA synthetasechromosome CDS2096343 1443 - 0.424809
glyQ CHY_0439 glycyl-tRNA synthetase, alpha subunitchromosome CDS383147 873 + 0.469645
glyS CHY_0440 glycyl-tRNA synthetase, beta subunitchromosome CDS384037 2073 + 0.429329
hisS CHY_2205 histidyl-tRNA synthetasechromosome CDS1986368 1272 - 0.475629
ileS CHY_0534 isoleucyl-tRNA synthetasechromosome CDS462751 2778 + 0.467243
infA CHY_2286 translation initiation factor IF-1chromosome CDS2062162 219 - 0.47032
infB CHY_1766 translation initiation factor IF-2chromosome CDS1578892 2484 - 0.463366
infC CHY_1578 translation initiation factor IF-3chromosome CDS1418466 510 - 0.405882
ksgA CHY_2616 dimethyladenosine transferasechromosome CDS2324990 876 - 0.456621
leuS CHY_0393 leucyl-tRNA synthetasechromosome CDS336058 2466 + 0.457421
lysS CHY_2365 lysyl-tRNA synthetasechromosome CDS2119803 1467 - 0.42604
map CHY_2288 methionine aminopeptidase, type Ichromosome CDS2062692 756 - 0.47619
miaA CHY_1394 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1247249 936 - 0.388889
miaB CHY_1398 tRNA-i(6)A37 thiotransferase enzyme MiaBchromosome CDS1253239 1323 - 0.407407
pheS CHY_1571 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS1413598 1023 - 0.42522
pnpA CHY_1758 polyribonucleotide nucleotidyltransferasechromosome CDS1572855 2196 - 0.472678
prfA CHY_2563 peptide chain release factor 1chromosome CDS2283456 1077 - 0.526462
prfB CHY_0163 peptide chain release factor 2chromosome CDS137034 1116 + 0.469534
prmA CHY_0417 ribosomal protein L11 methyltransferasechromosome CDS360904 918 + 0.410675
proS CHY_1775 prolyl-tRNA synthetasechromosome CDS1589214 1710 - 0.460234
pth CHY_0196 peptidyl-tRNA hydrolasechromosome CDS163814 564 + 0.429078
queA CHY_1516 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1355062 1017 - 0.417896
rbfA CHY_1765 ribosome-binding factor Achromosome CDS1578508 378 - 0.412698
rimM CHY_1431 16S rRNA processing protein RimMchromosome CDS1279491 519 - 0.344894
rluB CHY_1938 ribosomal large subunit pseudouridine synthase Bchromosome CDS1734465 726 - 0.472452
rnpA CHY_0002 ribonuclease P protein componentchromosome CDS426 351 + 0.327635
rph CHY_0314 ribonuclease PHchromosome CDS276278 765 + 0.473203
rplA CHY_2322 ribosomal protein L1chromosome CDS2086995 696 - 0.439655
rplB CHY_2306 ribosomal protein L2chromosome CDS2071049 825 - 0.494545
rplC CHY_2309 ribosomal protein L3chromosome CDS2072839 630 - 0.44127
rplD CHY_2308 ribosomal protein L4chromosome CDS2072190 621 - 0.455717
rplE CHY_2297 ribosomal protein L5chromosome CDS2067465 540 - 0.433333
rplF CHY_2294 ribosomal protein L6chromosome CDS2066276 549 - 0.471767
rplI CHY_0039 ribosomal protein L9chromosome CDS30426 456 + 0.385965
rplJ CHY_2321 ribosomal protein L10chromosome CDS2086276 531 - 0.438795
rplK CHY_2323 ribosomal protein L11chromosome CDS2087768 426 - 0.450704
rplL CHY_2320 ribosomal protein L7/L12chromosome CDS2085825 384 - 0.46875
rplM CHY_2274 ribosomal protein L13chromosome CDS2054514 432 - 0.428241
rplN CHY_2299 ribosomal protein L14chromosome CDS2068365 369 - 0.457995
rplO CHY_2290 ribosomal protein L15chromosome CDS2064711 441 - 0.489796
rplP CHY_2302 ribosomal protein L16chromosome CDS2069277 432 - 0.511574
rplQ CHY_2280 ribosomal protein L17chromosome CDS2059257 339 - 0.460177
rplR CHY_2293 ribosomal protein L18chromosome CDS2065880 369 - 0.485095
rplS CHY_1428 ribosomal protein L19chromosome CDS1277712 342 - 0.435673
rplT CHY_1576 ribosomal protein L20chromosome CDS1417861 354 - 0.375706
rplU CHY_0367 ribosomal protein L21chromosome CDS315852 312 + 0.423077
rplV CHY_2304 ribosomal protein L22chromosome CDS2070381 342 - 0.476608
rplW CHY_2307 ribosomal protein L23chromosome CDS2071902 288 - 0.333333
rplX CHY_2298 ribosomal protein L24chromosome CDS2068029 324 - 0.45679
rplY CHY_0195 ribosomal protein L25chromosome CDS163198 594 + 0.506734
rpmA CHY_0368 ribosomal protein L27chromosome CDS316182 267 + 0.41573
rpmC CHY_2301 ribosomal protein L29chromosome CDS2069078 210 - 0.414286
rpmD CHY_2291 ribosomal protein L30chromosome CDS2065163 183 - 0.409836
rpmE CHY_2565 ribosomal protein L31chromosome CDS2285452 198 - 0.5
rpmF CHY_1453 ribosomal protein L32chromosome CDS1300986 177 - 0.451977
rpmG CHY_2326 ribosomal protein L33chromosome CDS2089038 159 - 0.358491
rpmH CHY_0001 ribosomal protein L34chromosome CDS225 135 + 0.466667
rpmI CHY_1577 ribosomal protein L35chromosome CDS1418256 195 - 0.358974
rpmJ CHY_2285 ribosomal protein L36chromosome CDS2062027 114 - 0.438596
rpsB CHY_1787 ribosomal protein S2chromosome CDS1599452 699 - 0.44206
rpsC CHY_2303 ribosomal protein S3chromosome CDS2069711 669 - 0.442451
rpsD CHY_2282 ribosomal protein S4chromosome CDS2060589 627 - 0.489633
rpsE CHY_2292 ribosomal protein S5chromosome CDS2065358 504 - 0.470238
rpsF CHY_0035 ribosomal protein S6chromosome CDS28352 291 + 0.436426
rpsG CHY_2314 ribosomal protein S7chromosome CDS2077196 471 - 0.490446
rpsH CHY_2295 ribosomal protein S8chromosome CDS2066846 399 - 0.43609
rpsI CHY_2273 ribosomal protein S9chromosome CDS2054096 393 - 0.501272
rpsJ CHY_2310 ribosomal protein S10chromosome CDS2073481 309 - 0.446602
rpsK CHY_2283 ribosomal protein S11chromosome CDS2061231 390 - 0.497436
rpsL CHY_2315 ribosomal protein S12chromosome CDS2077705 381 - 0.488189
rpsM CHY_2284 ribosomal protein S13chromosome CDS2061636 372 - 0.454301
rpsN CHY_2296 ribosomal protein S14chromosome CDS2067263 186 - 0.456989
rpsO CHY_1760 ribosomal protein S15chromosome CDS1575188 270 - 0.437037
rpsP CHY_1433 ribosomal protein S16chromosome CDS1280297 261 - 0.467433
rpsQ CHY_2300 ribosomal protein S17chromosome CDS2068765 297 - 0.444444
rpsR CHY_0037 ribosomal protein S18chromosome CDS29111 231 + 0.450216
rpsS CHY_2305 ribosomal protein S19chromosome CDS2070743 285 - 0.42807
rpsT CHY_0406 ribosomal protein S20chromosome CDS348241 282 - 0.41844
rpsU CHY_0421 ribosomal protein S21chromosome CDS364356 180 + 0.388889
rsuA CHY_1531 ribosomal small subunit pseudouridine synthase Achromosome CDS1367083 696 - 0.373563
rumA CHY_1112 23S rRNA (uracil-5-)-methyltransferase RumAchromosome CDS987260 1326 + 0.408748
selB CHY_1802 selenocysteine-specific translation elongation factorchromosome CDS1611529 1908 - 0.434486
serS CHY_2697 seryl-tRNA synthetasechromosome CDS2386430 1275 - 0.476863
sun CHY_1481 sun proteinchromosome CDS1322167 1323 - 0.376417
tgt CHY_1515 queuine tRNA-ribosyltransferasechromosome CDS1353935 1116 - 0.428315
thrS CHY_1579 threonyl-tRNA synthetasechromosome CDS1419175 1905 - 0.422047
trmD CHY_1430 tRNA (guanine-N1)-methyltransferasechromosome CDS1278730 762 - 0.401575
trmU CHY_2197 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1978526 1098 - 0.459016
trpS CHY_1947 tryptophanyl-tRNA synthetasechromosome CDS1739465 981 - 0.449541
truA CHY_2276 tRNA pseudouridine synthase Achromosome CDS2056068 741 - 0.437247
truB CHY_1763 tRNA pseudouridine synthase Bchromosome CDS1576699 867 - 0.44406
tsf CHY_1786 translation elongation factor Tschromosome CDS1598688 654 - 0.434251
tuf1 CHY_2312 translation elongation factor Tuchromosome CDS2073884 1203 - 0.513716
tuf2 CHY_2327 translation elongation factor Tuchromosome CDS2089329 1203 - 0.513716
tyrS CHY_1561 tyrosyl-tRNA synthetasechromosome CDS1398892 1236 - 0.37055
valS CHY_0334 valyl-tRNA synthetasechromosome CDS288145 2637 + 0.483504
ychF CHY_0031 GTP-binding protein YchFchromosome CDS23931 1089 - 0.488522
yfiA CHY_0156 ribosomal subunit interface proteinchromosome CDS130360 534 + 0.41573