Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Rhizobium etli CFN 42, CFN 42
Number of genes found: 183
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| Rhizobium etli CFN 42, CFN 42 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | RHE_CH03406 | probable pseudouridylate synthase, ribosomal large subunit protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3579236 | 939 | + | 0.625133 |
| NA | RHE_CH00458 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 470266 | 483 | + | 0.600414 |
| NA | RHE_CH00959 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 1007784 | 381 | + | 0.603675 |
| NA | RHE_CH02343 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2448309 | 450 | - | 0.622222 |
| NA | RHE_CH02315 | probable tRNA/rRNA methyltransferase protein | SubName: Full=Probable tRNA/rRNA methyltransferase protein; | chromosome | CDS | 2412438 | 831 | - | 0.612515 |
| NA | RHE_CH03043 | probable tRNA/rRNA methyltransferase protein | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 3184368 | 462 | + | 0.660173 |
| NA | RHE_CH01957 | probable deoxycytidylate deaminase family protein | SubName: Full=Probable deoxycytidylate deaminase family protein; | chromosome | CDS | 2041582 | 588 | - | 0.60034 |
| NA | RHE_CH00406 | probable sigma 54 modulation protein | SubName: Full=Probable sigma 54 modulation protein; | chromosome | CDS | 420275 | 639 | + | 0.547731 |
| NA | RHE_CH02256 | putative acetyltransferase protein | SubName: Full=Putative acetyltransferase protein; | chromosome | CDS | 2356390 | 576 | - | 0.630208 |
| NA | RHE_CH04045 | putative serine--tRNA ligase protein | SubName: Full=Putative serine--tRNA ligase protein; EC=6.1.1.11; | chromosome | CDS | 4283198 | 909 | + | 0.613861 |
| NA | RHE_CH02569 | putative tRNA-dihydrouridine synthase (nifR3-like) protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 2678948 | 966 | + | 0.65942 |
| NA | RHE_CH04064 | putative acetyltransferase protein | SubName: Full=Putative acetyltransferase protein; | chromosome | CDS | 4307913 | 657 | + | 0.611872 |
| NA | RHE_CH02874 | probable enterobacter ribonuclease protein | SubName: Full=Probable enterobacter ribonuclease protein; EC=3.1.27.6; | chromosome | CDS | 3004354 | 741 | - | 0.631579 |
| NA | RHE_CH01655 | probable tRNA/rRNA methyltransferase protein | SubName: Full=Probable tRNA/rRNA methyltransferase protein; | chromosome | CDS | 1745952 | 891 | - | 0.635241 |
| NA | RHE_CH04109 | probable RNA methyltransferase-sun protein | SubName: Full=Probable RNA methyltransferase-sun protein; | chromosome | CDS | 4359862 | 1395 | - | 0.655914 |
| NA | RHE_CH00899 | probable translation factor sua5 protein | SubName: Full=Probable translation factor sua5 protein; | chromosome | CDS | 946469 | 1011 | - | 0.676558 |
| NA | RHE_CH01276 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 1325047 | 369 | + | 0.626016 |
| NA | RHE_CH02947 | putative aminoglycoside 3`-phosphotransferase protein | SubName: Full=Putative aminoglycoside 3`-phosphotransferase protein; EC=2.7.1.95; | chromosome | CDS | 3074801 | 786 | - | 0.652672 |
| NA | RHE_CH02467 | probable acetyltransferase protein | SubName: Full=Probable acetyltransferase protein; | chromosome | CDS | 2579764 | 309 | - | 0.627832 |
| NA | RHE_CH02040 | putative translation initiation inhibitor protein | SubName: Full=Putative translation initiation inhibitor protein; | chromosome | CDS | 2132754 | 390 | - | 0.576923 |
| NA | RHE_PF00558 | putative S-adenosylmethionine tRNA ribosyltransferase protein | SubName: Full=Putative S-adenosylmethionine tRNA ribosyltransferase protein; | p42f | CDS | 624036 | 1047 | - | 0.643744 |
| NA | RHE_CH01911 | putative translation initiation inhibitor protein | SubName: Full=Putative translation initiation inhibitor protein; | chromosome | CDS | 1993054 | 471 | - | 0.615711 |
| NA | RHE_CH03954 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 4181356 | 1272 | - | 0.636006 |
| NA | RHE_CH00602 | probable translation initiation inhibitor protein | SubName: Full=Probable translation initiation inhibitor protein; | chromosome | CDS | 619566 | 393 | + | 0.572519 |
| NA | RHE_CH01522 | putative acetyltransferase protein | SubName: Full=Putative acetyltransferase protein; | chromosome | CDS | 1602486 | 516 | - | 0.622093 |
| NA | RHE_CH03633 | probable acetyltransferase protein | SubName: Full=Probable acetyltransferase protein; | chromosome | CDS | 3844219 | 696 | - | 0.58046 |
| NA | RHE_CH01163 | putative exonuclease protein involved in mRNA processing | SubName: Full=Putative exonuclease protein involved in mRNA processing; | chromosome | CDS | 1217194 | 1011 | + | 0.645895 |
| NA | RHE_CH02693 | putative translation initiation inhibitor protein | SubName: Full=Putative translation initiation inhibitor protein; | chromosome | CDS | 2804132 | 489 | + | 0.654397 |
| NA | RHE_PF00541 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | p42f | CDS | 606687 | 471 | + | 0.656051 |
| NA | RHE_CH00294 | putative acetyltransferase protein | SubName: Full=Putative acetyltransferase protein; | chromosome | CDS | 301467 | 471 | - | 0.619958 |
| NA | RHE_CH04065 | putative acetyltransferase protein | SubName: Full=Putative acetyltransferase protein; | chromosome | CDS | 4308566 | 588 | + | 0.659864 |
| NA | RHE_CH02879 | putative translation initiation inhibitor protein | SubName: Full=Putative translation initiation inhibitor protein; | chromosome | CDS | 3010153 | 345 | - | 0.626087 |
| NA | RHE_CH01732 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 1816659 | 498 | - | 0.63253 |
| NA | RHE_CH03031 | putative GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 3171563 | 1296 | + | 0.612654 |
| NA | RHE_CH03339 | probable RNA methylase protein | SubName: Full=Probable RNA methylase protein; | chromosome | CDS | 3502052 | 822 | - | 0.643552 |
| NA | RHE_CH00110 | probable rRNA (guanine-N2-)-methyltransferase, small subunit protein | SubName: Full=Probable rRNA (Guanine-N2-)-methyltransferase, small subunit protein; EC=2.1.1.171; | chromosome | CDS | 118600 | 1017 | - | 0.66175 |
| NA | RHE_CH00028 | probable nucleotidyltransferase protein | SubName: Full=Probable nucleotidyltransferase protein; | chromosome | CDS | 29115 | 732 | - | 0.606557 |
| NA | RHE_CH01283 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 1330204 | 306 | + | 0.604575 |
| NA | RHE_CH00376 | putative 2-methylthioadenine synthetase (miaB-like) protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 387736 | 1410 | - | 0.62695 |
| NA | RHE_CH03534 | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 3722018 | 126 | + | 0.563492 |
| NA | RHE_CH00910 | probable RNA-methyltransferase protein | SubName: Full=Probable RNA-methyltransferase protein; | chromosome | CDS | 957746 | 1251 | - | 0.664269 |
| NA | RHE_CH00038 | probable peptide chain release factor protein (peptidyl-tRNA hydrolase protein) | SubName: Full=Probable peptide chain release factor protein (Peptidyl-tRNA hydrolase protein); | chromosome | CDS | 41647 | 438 | + | 0.630137 |
| NA | RHE_CH04023 | putative heat shock protein (ribosome-associated) | SubName: Full=Putative heat shock protein (Ribosome-associated); | chromosome | CDS | 4260104 | 405 | + | 0.637037 |
| NA | RHE_CH00117 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 127889 | 690 | - | 0.627536 |
| NA | RHE_CH01528 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 1607987 | 501 | - | 0.616766 |
| aacC2 | RHE_CH02150 | aminoglycoside N6`-acetyltransferase protein | SubName: Full=Aminoglycoside N6`-acetyltransferase protein; EC=2.3.1.82; | chromosome | CDS | 2255187 | 510 | - | 0.498039 |
| alaS2 | RHE_CH02322 | alanyl-tRNA synthetase protein | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 2419864 | 2700 | - | 0.63037 |
| argS | RHE_CH01818 | arginyl-tRNA synthetase (Arginine--tRNA ligase) protein | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 1903654 | 1758 | + | 0.581342 |
| aspS | RHE_CH01497 | aspartyl-tRNA synthetase protein | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; | chromosome | CDS | 1572365 | 1809 | + | 0.619679 |
| codAch1 | RHE_CH00834 | cytosine deaminase protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 874995 | 432 | - | 0.655093 |
| cysS | RHE_CH01425 | cysteinyl-tRNA synthetase protein | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 1495674 | 1377 | - | 0.621641 |
| deaD | RHE_CH02179 | ATP-dependent RNA helicase protein | SubName: Full=ATP-dependent RNA helicase protein; | chromosome | CDS | 2282640 | 1956 | - | 0.654397 |
| def1 | RHE_CH00412 | peptide deformylase protein | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 428111 | 516 | + | 0.610465 |
| def2 | RHE_CH02219 | peptide deformylase protein | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 2323668 | 495 | + | 0.636364 |
| efp | RHE_CH04040 | elongation factor protein | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 4278670 | 570 | - | 0.617544 |
| fmt | RHE_CH00414 | methionyl-tRNA formyltransferase protein | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 429389 | 936 | + | 0.659188 |
| ftsJ | RHE_CH00789 | cell division protein | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 827033 | 720 | + | 0.629167 |
| fusA1 | RHE_CH01066 | elongation factor G protein | SubName: Full=Elongation factor G protein; EC=3.6.5.3; | chromosome | CDS | 1117298 | 1962 | + | 0.615698 |
| fusA2 | RHE_CH01672 | elongation factor G protein | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 1764565 | 2100 | + | 0.594286 |
| gatA1 | RHE_CH00218 | glutamyl-tRNA amidotransferase subunit A protein | SubName: Full=Glutamyl-tRNA amidotransferase subunit A protein; | chromosome | CDS | 229643 | 1392 | - | 0.649425 |
| gatA2 | RHE_CH01855 | glutamyl-tRNA amidotransferase subunit A protein | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 1941473 | 1482 | + | 0.637652 |
| gatB | RHE_CH01862 | glutamyl-tRNA amidotransferase subunit B protein | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 1947116 | 1503 | + | 0.608117 |
| gatC | RHE_CH01854 | glutamyl-tRNA amidotransferase subunit C protein | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 1941126 | 288 | + | 0.583333 |
| genX | RHE_CH04041 | lysyl-tRNA synthetase protein | SubName: Full=Lysyl-tRNA synthetase protein; EC=6.1.1.6; | chromosome | CDS | 4279388 | 1062 | + | 0.645951 |
| gidA1 | RHE_CH01836 | glucose inhibited division protein A | RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO; EC=2.1.1.74; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase; | chromosome | CDS | 1923654 | 1434 | - | 0.636681 |
| gltX1 | RHE_CH03656 | glutamyl-tRNA synthetase protein | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 3871372 | 1467 | + | 0.608044 |
| gltX2 | RHE_CH03786 | glutamyl-tRNA synthetase protein | SubName: Full=Glutamyl-tRNA synthetase protein; | chromosome | CDS | 4012535 | 882 | + | 0.639456 |
| glyQ | RHE_CH00881 | glycyl-tRNA synthetase, alpha subunit protein | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; | chromosome | CDS | 921168 | 957 | + | 0.628004 |
| glyS | RHE_CH00890 | glycyl-tRNA synthetase, beta subunit protein | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 931735 | 2115 | - | 0.648227 |
| gshB | RHE_CH00322 | glutathione synthetase protein | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 327589 | 948 | + | 0.624473 |
| hemK | RHE_CH03755 | protoporphyrinogen oxidase (methyltransferase) protein | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 3981452 | 861 | - | 0.563298 |
| hisS | RHE_CH00821 | histidyl-tRNA synthetase protein | SubName: Full=Histidyl-tRNA synthetase protein; EC=6.1.1.21; | chromosome | CDS | 860188 | 1659 | + | 0.636528 |
| ileS | RHE_CH00832 | isoleucyl-tRNA synthetase protein | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; | chromosome | CDS | 871218 | 2907 | + | 0.625731 |
| infA | RHE_CH00584 | translation initiation factor IF-1 protein | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 606464 | 219 | + | 0.547945 |
| infB | RHE_CH00116 | translation initiation factor IF-2 protein | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 125036 | 2751 | - | 0.650309 |
| infC | RHE_CH00260 | translation initiation factor IF-3 protein | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 271883 | 507 | + | 0.558185 |
| kptA | RHE_CH02280 | RNA 2`-phosphotransferase protein | SubName: Full=RNA 2`-phosphotransferase protein; | chromosome | CDS | 2382000 | 516 | + | 0.571705 |
| ksgA | RHE_CH01449 | dimethyladenosine transferase (16S rRNA dimethylase) protein | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 1519250 | 828 | - | 0.637681 |
| leuS | RHE_CH04116 | leucyl-tRNA synthetase protein | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 4368710 | 2631 | + | 0.617256 |
| ligT | RHE_CH03936 | 2`-5` RNA ligase protein | SubName: Full=2`-5` RNA ligase protein; | chromosome | CDS | 4164322 | 594 | - | 0.616162 |
| lysS | RHE_CH03657 | lysyl-tRNA synthetase protein | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 3872861 | 1497 | + | 0.609218 |
| map1 | RHE_CH01849 | methionine aminopeptidase protein | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 1937441 | 837 | - | 0.624851 |
| map2 | RHE_CH03116 | methionine aminopeptidase protein | RecName: Full=Methionine aminopeptidase; EC=3.4.11.18; | chromosome | CDS | 3264320 | 672 | - | 0.644345 |
| metS | RHE_CH02157 | methionyl-tRNA synthetase protein | RecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; | chromosome | CDS | 2262146 | 1551 | - | 0.615732 |
| mgpS | RHE_CH04022 | ATP-dependent DNA helicase protein | SubName: Full=ATP-dependent DNA helicase protein; | chromosome | CDS | 4256943 | 3159 | + | 0.641026 |
| miaA | RHE_CH02793 | tRNA delta(2)-isopentenylpyrophosphate transferase protein | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 2906992 | 894 | - | 0.649888 |
| motB | RHE_CH00674 | chemotaxis motility protein | SubName: Full=Chemotaxis motility protein; | chromosome | CDS | 692939 | 1311 | + | 0.620137 |
| nifR | RHE_CH01946 | probable tRNA-dihydrouridine synthase protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 2027864 | 954 | + | 0.668763 |
| papS | RHE_CH03049 | poly(A) polymerase protein | SubName: Full=Poly(A) polymerase protein; EC=2.7.7.19; | chromosome | CDS | 3189105 | 1134 | - | 0.655203 |
| pheS | RHE_CH00263 | phenylalanyl-tRNA synthetase, alpha chain protein | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 273498 | 1083 | + | 0.618652 |
| pnp | RHE_CH00111 | polyribonucleotide nucleotidyltransferase protein | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 119692 | 2139 | - | 0.618046 |
| prfA | RHE_CH03756 | peptide chain release factor 1 protein | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 3982309 | 1056 | - | 0.614583 |
| prfB | RHE_CH01648 | peptide chain release factor 2 protein | SubName: Full=Peptide chain release factor 2 protein; | chromosome | CDS | 1740569 | 969 | + | 0.623323 |
| prfC | RHE_CH00331 | peptide chain release factor 3 protein | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 335907 | 1584 | + | 0.631313 |
| prmA | RHE_CH02828 | ribosomal protein L11 methyltransferase protein | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 2950462 | 879 | - | 0.632537 |
| proS | RHE_CH01623 | prolyl-tRNA synthetase protein | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 1703719 | 1233 | + | 0.600162 |
| pth | RHE_CH03028 | peptidyl-tRNA hydrolase protein | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 3169971 | 723 | + | 0.608575 |
| queA | RHE_CH02116 | S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine biosynthesis)protein | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 2215897 | 1086 | + | 0.642726 |
| rbfA | RHE_CH00115 | ribosome binding factor A, rRNA processing protein | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 124475 | 411 | - | 0.59854 |
| rhlE1 | RHE_CH02265 | ATP dependent RNA helicase protein | SubName: Full=ATP dependent RNA helicase protein; | chromosome | CDS | 2367966 | 1584 | + | 0.618056 |
| rhlE2 | RHE_CH03152 | ATP-dependent RNA helicase protein | SubName: Full=ATP-dependent RNA helicase protein; | chromosome | CDS | 3306142 | 1683 | + | 0.663102 |
| rimJ | RHE_CH00977 | alanine acetyltransferase (ribosomal) protein | SubName: Full=Alanine acetyltransferase (Ribosomal) protein; EC=2.3.1.128; | chromosome | CDS | 1026279 | 615 | - | 0.598374 |
| rimM | RHE_CH03960 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 4186629 | 654 | + | 0.594801 |
| rluB | RHE_CH00835 | pseudouridylate synthase, subunit B protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 875523 | 1887 | + | 0.679385 |
| rluC | RHE_CH02236 | pseudouridylate synthase, ribosomal large subunit C protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2337231 | 954 | - | 0.63522 |
| rluD | RHE_CH03341 | pseudouridylate synthase, ribosomal large subunit D protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3503266 | 1065 | + | 0.625352 |
| rnd1 | RHE_CH00095 | RNAse D protein | SubName: Full=RNAse D protein; EC=3.1.26.3; | chromosome | CDS | 105297 | 627 | + | 0.626794 |
| rnd2 | RHE_CH01495 | RNase D protein | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 1569461 | 1146 | - | 0.620419 |
| rne | RHE_CH01645 | ribonuclease E protein | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 1732716 | 2886 | - | 0.628205 |
| rnpA | RHE_CH00438 | ribonuclease P protein | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 451465 | 402 | - | 0.619403 |
| rph | RHE_CH00363 | ribonuclease PH protein | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 375629 | 720 | - | 0.633333 |
| rplA | RHE_CH01664 | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 1751938 | 702 | + | 0.635328 |
| rplB | RHE_CH01678 | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 1770137 | 837 | + | 0.621266 |
| rplC | RHE_CH01675 | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 1768560 | 642 | + | 0.610592 |
| rplD | RHE_CH01676 | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 1769215 | 621 | + | 0.611916 |
| rplE | RHE_CH01687 | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 1774251 | 558 | + | 0.589606 |
| rplF | RHE_CH01690 | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 1775600 | 534 | + | 0.586142 |
| rplI | RHE_CH01437 | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 1508722 | 579 | - | 0.626943 |
| rplJ | RHE_CH01665 | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 1752970 | 519 | + | 0.581888 |
| rplK | RHE_CH01663 | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 1751502 | 432 | + | 0.571759 |
| rplL | RHE_CH01666 | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 1753545 | 384 | + | 0.585938 |
| rplM | RHE_CH01571 | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 1652463 | 465 | - | 0.602151 |
| rplN | RHE_CH01685 | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 1773569 | 369 | + | 0.582656 |
| rplO | RHE_CH01694 | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 1777452 | 477 | + | 0.624738 |
| rplP | RHE_CH01682 | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 1772432 | 414 | + | 0.611111 |
| rplQ | RHE_CH01700 | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 1782494 | 423 | + | 0.65721 |
| rplR | RHE_CH01691 | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 1776146 | 363 | + | 0.641873 |
| rplS | RHE_CH03962 | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 4188196 | 537 | + | 0.636872 |
| rplT | RHE_CH00262 | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 272941 | 405 | + | 0.609877 |
| rplU | RHE_CH04062 | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 4307166 | 318 | + | 0.606918 |
| rplV | RHE_CH01680 | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 1771270 | 390 | + | 0.646154 |
| rplW | RHE_CH01677 | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 1769832 | 294 | + | 0.568027 |
| rplX | RHE_CH01686 | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 1773950 | 309 | + | 0.595469 |
| rplY | RHE_CH03025 | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 3165898 | 702 | + | 0.586895 |
| rpmA | RHE_CH04063 | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 4307518 | 270 | + | 0.592593 |
| rpmB | RHE_CH03816 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 4040452 | 297 | + | 0.59596 |
| rpmC | RHE_CH01683 | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 1772857 | 201 | + | 0.58209 |
| rpmD | RHE_CH01693 | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 1777226 | 210 | + | 0.590476 |
| rpmE | RHE_CH03506 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 3693815 | 222 | - | 0.59009 |
| rpmF | RHE_CH04015 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 4251739 | 186 | + | 0.602151 |
| rpmG | RHE_CH01634 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 1718586 | 168 | - | 0.482143 |
| rpmH | RHE_CH00439 | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 451888 | 135 | - | 0.637037 |
| rpmI | RHE_CH00261 | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 272698 | 204 | + | 0.583333 |
| rpsA | RHE_CH00097 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 107742 | 1704 | - | 0.60446 |
| rpsB | RHE_CH01913 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 1994847 | 768 | + | 0.611979 |
| rpsC | RHE_CH01681 | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 1771659 | 735 | + | 0.62449 |
| rpsD | RHE_CH02312 | 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 2409174 | 618 | - | 0.600324 |
| rpsE | RHE_CH01692 | 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 1776643 | 570 | + | 0.633333 |
| rpsF | RHE_CH01440 | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 1510727 | 459 | - | 0.620915 |
| rpsG | RHE_CH01671 | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 1764065 | 471 | + | 0.596603 |
| rpsH | RHE_CH01689 | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 1775159 | 399 | + | 0.588972 |
| rpsI | RHE_CH01570 | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 1651993 | 468 | - | 0.651709 |
| rpsJ | RHE_CH01674 | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 1768218 | 309 | + | 0.608414 |
| rpsK | RHE_CH01698 | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 1780874 | 390 | + | 0.628205 |
| rpsL | RHE_CH01670 | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 1763615 | 372 | + | 0.591398 |
| rpsM | RHE_CH01697 | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 1780372 | 369 | + | 0.607046 |
| rpsN | RHE_CH01688 | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 1774841 | 306 | + | 0.598039 |
| rpsO | RHE_CH00112 | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 122180 | 270 | - | 0.555556 |
| rpsP | RHE_CH03959 | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 4186231 | 369 | + | 0.642276 |
| rpsQ | RHE_CH01684 | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 1773070 | 240 | + | 0.566667 |
| rpsR | RHE_CH01439 | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 1510466 | 249 | - | 0.646586 |
| rpsS | RHE_CH01679 | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 1770989 | 279 | + | 0.551971 |
| rpsT | RHE_CH00357 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 369376 | 279 | + | 0.637993 |
| rpsUch1 | RHE_CH01171 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21 1; | chromosome | CDS | 1224850 | 237 | + | 0.611814 |
| rpsUch2 | RHE_CH03607 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21 2; | chromosome | CDS | 3816351 | 213 | + | 0.591549 |
| rrf | RHE_CH01916 | ribosome recycling factor protein | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1997659 | 561 | + | 0.59893 |
| serS | RHE_CH01826 | seryl-tRNA synthetase (serine-tRNA ligase) protein | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 1913331 | 1284 | + | 0.623832 |
| spoU | RHE_CH00393 | rRNA methylase protein, TrmH family | SubName: Full=rRNA methylase protein, TrmH family; | chromosome | CDS | 409510 | 861 | - | 0.652729 |
| sun | RHE_CH00305 | tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein | SubName: Full=tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein; | chromosome | CDS | 313215 | 1290 | - | 0.66124 |
| tgt | RHE_CH02117 | queuine tRNA-ribosyltransferase protein | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 2216979 | 1131 | + | 0.64191 |
| thrS | RHE_CH02196 | threonyl-tRNA synthetase protein | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 2302639 | 2007 | - | 0.605381 |
| tlyA | RHE_CH00911 | hemolysin protein | SubName: Full=Hemolysin protein; | chromosome | CDS | 958993 | 747 | - | 0.678715 |
| trmD | RHE_CH03961 | tRNA guanine-N-1-methyltransferase protein | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 4187321 | 663 | + | 0.662142 |
| trmU | RHE_CH03452 | tRNA5-methylaminomethyl-2-thiouridylate-methyltr ansferaseprotein | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 3635085 | 1227 | - | 0.647107 |
| trpS | RHE_CH00383 | tryptophanyl-tRNA synthetase protein | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; | chromosome | CDS | 393052 | 1065 | - | 0.621596 |
| truA | RHE_CH00415 | tRNA pseudouridine synthase A protein | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 430324 | 804 | + | 0.66791 |
| truB | RHE_CH00114 | tRNA pseudouridine synthase B protein | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 123530 | 933 | - | 0.632369 |
| tsf | RHE_CH01914 | translation elongation factor Ts protein | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 1995854 | 927 | + | 0.623517 |
| tufA | RHE_CH01673 | elongation factor EF-Tu protein | RecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; | chromosome | CDS | 1766733 | 1179 | + | 0.614928 |
| tufB | RHE_CH01658 | elongation factor EF-Tu protein | RecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; | chromosome | CDS | 1747562 | 1176 | + | 0.614796 |
| tyrS | RHE_CH02258 | tyrosyl-tRNA synthetase protein | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; | chromosome | CDS | 2358166 | 1257 | + | 0.621321 |
| valS | RHE_CH01811 | valyl-tRNA synthetase (valine-tRNA ligase) protein | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; | chromosome | CDS | 1894712 | 2844 | + | 0.602321 |
| vbsA | RHE_PF00459 | N6-hydroxylysine O-acetyltransferase protein | SubName: Full=N6-hydroxylysine O-acetyltransferase protein; EC=2.3.1.102; | p42f | CDS | 518277 | 987 | + | 0.628166 |
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