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2024-05-05 20:11:01

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Nitrosococcus oceani ATCC 19707, ATCC 19707

Number of genes found: 153

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Nitrosococcus oceani ATCC 19707, ATCC 19707
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Noc_0433 conserved hypothetical proteinchromosome CDS472856 270 - 0.425926
NA Noc_0393 Modification methylase HemKchromosome CDS435130 852 + 0.553991
NA Noc_2960 Dihydrouridine synthase TIM-barrel protein yjbNchromosome CDS3346098 1014 + 0.519724
NA Noc_0237 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS260991 1344 + 0.517113
NA Noc_2014 Glutamyl-tRNA(Gln) amidotransferase B subunitchromosome CDS2323511 1434 - 0.48675
NA Noc_2823 RNA methyltransferase TrmH, group 2chromosome CDS3199602 486 + 0.516461
NA Noc_2335 Ribosomal protein L11chromosome CDS2680173 432 - 0.488426
NA Noc_0902 Histidyl-tRNA synthetase, class IIachromosome CDS983349 1272 + 0.505503
NA Noc_0264 Glutamyl-tRNA synthetasechromosome CDS291742 1410 + 0.488652
NA Noc_0711 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS769982 468 - 0.570513
NA Noc_2310 Ribosomal protein S8chromosome CDS2658066 393 - 0.46056
NA Noc_2259 16S rRNA processing protein RimMchromosome CDS2606192 528 - 0.545455
NA Noc_1645 Queuosine biosynthesis proteinchromosome CDS1840664 1035 + 0.449275
NA Noc_1091 Valyl-tRNA synthetase, class Iachromosome CDS1195831 2790 - 0.515054
NA Noc_2333 Ribosomal protein L10chromosome CDS2678658 561 - 0.500891
NA Noc_1143 Ribosomal protein L20chromosome CDS1251012 360 + 0.552778
NA Noc_0220 Ribosomal protein S6chromosome CDS244005 471 + 0.524416
NA Noc_2257 Ribosomal protein L19chromosome CDS2605058 348 - 0.471264
NA Noc_2316 Ribosomal protein L29chromosome CDS2660442 201 - 0.502488
NA Noc_2308 Ribosomal protein L18chromosome CDS2657138 354 - 0.488701
NA Noc_2611 DEAD/DEAH box helicase-likechromosome CDS2965264 1503 + 0.510978
NA Noc_2934 Modification methylase HemKchromosome CDS3319430 900 - 0.541111
NA Noc_3037 Ribosomal protein S20pchromosome CDS3433246 264 - 0.522727
NA Noc_2844 Pseudouridine synthase, RluDchromosome CDS3221119 975 + 0.489231
NA Noc_2550 Pseudouridine synthase, RluDchromosome CDS2900259 960 + 0.55
NA Noc_2319 Ribosomal protein L22chromosome CDS2661753 333 - 0.495495
NA Noc_3015 Methionyl-tRNA formyltransferasechromosome CDS3408393 972 + 0.546296
NA Noc_2582 DEAD/DEAH box helicase-likechromosome CDS2935489 1296 - 0.469136
NA Noc_0793 Peptide chain release factor 2chromosome CDS866222 996 + 0.527108
NA Noc_2118 tRNA pseudouridine synthase Bchromosome CDS2439503 927 - 0.507012
NA Noc_1038 Tryptophanyl-tRNA synthetase, class Ibchromosome CDS1147182 1218 + 0.522168
NA Noc_2309 Ribosomal protein L6chromosome CDS2657514 537 - 0.487896
NA Noc_1669 Ribosomal protein S32chromosome CDS1862111 198 - 0.439394
NA Noc_0926 Alanine--tRNA ligasechromosome CDS1021251 2622 + 0.519069
NA Noc_2326 Translation elongation factor Tuchromosome CDS2665195 1191 - 0.544081
NA Noc_0219 RNA methyltransferase TrmH, group 3chromosome CDS243038 825 + 0.570909
NA Noc_3088 ribonuclease P proteinchromosome CDS3481050 360 - 0.477778
NA Noc_0897 Prolyl-tRNA synthetasechromosome CDS978190 1725 - 0.481739
NA Noc_2794 Sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS3168317 327 + 0.440367
NA Noc_0923 2',5' RNA ligasechromosome CDS1019107 534 + 0.550562
NA Noc_1031 hypothetical proteinchromosome CDS1141660 627 - 0.583732
NA Noc_0509 Peptide chain release factor 1chromosome CDS549334 1083 - 0.508772
NA Noc_0222 Ribosomal protein L9chromosome CDS244898 456 + 0.532895
NA Noc_2837 Ribosomal protein S9chromosome CDS3213489 390 + 0.520513
NA Noc_1549 S6 modification enzyme RimKchromosome CDS1719337 906 - 0.536424
NA Noc_2352 Queuine tRNA-ribosyltransferasechromosome CDS2696276 1176 - 0.534014
NA Noc_2635 Glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS2989717 288 + 0.458333
NA Noc_0808 Ribosomal protein S2chromosome CDS881441 810 + 0.487654
NA Noc_2313 Ribosomal protein L24chromosome CDS2659439 318 - 0.465409
NA Noc_2307 Ribosomal protein S5chromosome CDS2656611 513 - 0.526316
NA Noc_2040 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2350337 1176 + 0.509354
NA Noc_1195 SmpA/OmlAchromosome CDS1303342 591 + 0.472081
NA Noc_2324 Ribosomal protein L3chromosome CDS2664190 648 - 0.492284
NA Noc_1041 Pseudouridine synthase, Rsuchromosome CDS1149947 807 + 0.556382
NA Noc_2636 Glutamyl-tRNA(Gln) amidotransferase A subunitchromosome CDS2990033 1452 + 0.519284
NA Noc_2332 Ribosomal protein L7/L12chromosome CDS2678207 381 - 0.480315
NA Noc_1050 Ribosomal protein L11 methyltransferasechromosome CDS1157322 879 - 0.511945
NA Noc_1721 16S rRNA dimethylasechromosome CDS1926053 795 - 0.514465
NA Noc_1215 YjgF-like proteinchromosome CDS1329124 387 + 0.516796
NA Noc_2306 Ribosomal protein L15chromosome CDS2655984 435 - 0.514943
NA Noc_0259 S6 modification enzyme RimKchromosome CDS285186 924 - 0.537879
NA Noc_2302 Ribosomal protein S11chromosome CDS2653607 384 - 0.473958
NA Noc_2312 Ribosomal protein L5chromosome CDS2658841 546 - 0.450549
NA Noc_2250 Glutamyl-tRNA synthetasechromosome CDS2598576 1419 - 0.534179
NA Noc_2383 Putative translation factor, Sua5/YciO/YrdC/YwlCchromosome CDS2732090 630 - 0.498413
NA Noc_0180 Ribosomal protein S1chromosome CDS199616 1686 + 0.492289
NA Noc_1018 Pseudouridylate synthasechromosome CDS1129157 780 + 0.525641
NA Noc_0516 Aminoacyl-tRNA hydrolasechromosome CDS557078 582 + 0.532646
NA Noc_2603 Cytidine/deoxycytidylate deaminase, zinc-binding regionchromosome CDS2956686 468 - 0.555556
NA Noc_1813 Aerobactin siderophore biosynthesis protein IucBchromosome CDS2053782 825 - 0.345455
NA Noc_2591 tRNA isopentenyltransferasechromosome CDS2944624 945 - 0.52381
NA Noc_1637 Protein of unknown function UPF0044chromosome CDS1829214 291 - 0.446735
NA Noc_2318 ribosomal protein S3chromosome CDS2661064 672 - 0.480655
NA Noc_1317 phosphoenolpyruvate phosphomutasechromosome CDS1465505 1671 - 0.519449
NA Noc_2277 Isoleucyl-tRNA synthetase, class Iachromosome CDS2626061 2823 - 0.543394
NA Noc_1166 Cytidine/deoxycytidylate deaminase, zinc-binding regionchromosome CDS1276477 573 + 0.560209
NA Noc_2640 Ribosomal protein L28chromosome CDS2994954 237 + 0.468354
NA Noc_0042 Ribosomal protein S21chromosome CDS40548 216 + 0.550926
NA Noc_2328 Ribosomal protein S7chromosome CDS2668567 471 - 0.488323
NA Noc_0807 Peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS880452 768 - 0.481771
NA Noc_2225 Translation elongation factor Gchromosome CDS2569992 2043 + 0.531082
NA Noc_0809 Elongation factor Tschromosome CDS882341 885 + 0.480226
NA Noc_0243 Ribosomal protein L31chromosome CDS268174 207 + 0.429952
NA Noc_2825 Putative translation factor, SUA5/yciO/yrdC-likechromosome CDS3201105 558 - 0.580645
NA Noc_1141 Initiation factor 3chromosome CDS1250280 459 + 0.485839
NA Noc_2314 Ribosomal protein L14chromosome CDS2659768 369 - 0.487805
NA Noc_2190 hypothetical proteinchromosome CDS2530498 1167 - 0.48072
NA Noc_1142 Ribosomal protein L35chromosome CDS1250802 198 + 0.5
NA Noc_2334 Ribosomal protein L1chromosome CDS2679474 696 - 0.482759
NA Noc_0373 Glycine--tRNA ligasechromosome CDS409334 2076 + 0.527457
NA Noc_2836 Ribosomal protein L13chromosome CDS3213037 429 + 0.522144
NA Noc_2598 Translation initiation factor IF-1chromosome CDS2952705 219 + 0.465753
NA Noc_2311 Ribosomal protein S14chromosome CDS2658516 306 - 0.496732
NA Noc_3089 Ribosomal protein L34chromosome CDS3481439 135 - 0.525926
NA Noc_0515 Ribosomal protein L25chromosome CDS556418 645 + 0.513178
NA Noc_2654 conserved hypothetical proteinchromosome CDS3006371 1044 - 0.498084
NA Noc_2322 Ribosomal L23 proteinchromosome CDS2663260 297 - 0.451178
NA Noc_2119 Ribosome-binding factor Achromosome CDS2440472 384 - 0.471354
NA Noc_2301 Ribosomal protein S4chromosome CDS2652965 627 - 0.496013
NA Noc_0302 Aspartyl-tRNA synthetasechromosome CDS330232 1788 + 0.524608
NA Noc_2570 Ribosomal RNA methyltransferase RrmJ/FtsJchromosome CDS2922551 639 - 0.532081
NA Noc_3033 Ribosomal protein L21chromosome CDS3430364 315 + 0.469841
NA Noc_2726 putative methyltransferasechromosome CDS3095439 249 - 0.506024
NA Noc_2329 Ribosomal protein S12chromosome CDS2669099 375 - 0.536
NA Noc_2625 Lysyl-tRNA synthetase-related proteinchromosome CDS2979604 1071 - 0.530345
NA Noc_2315 Ribosomal protein S17chromosome CDS2660178 261 - 0.463602
NA Noc_2116 Polyribonucleotide nucleotidyltransferasechromosome CDS2436900 2088 - 0.494253
NA Noc_1618 Lysine--tRNA ligasechromosome CDS1806806 1926 + 0.480789
NA Noc_1211 Cytidine/deoxycytidylate deaminase, zinc-binding regionchromosome CDS1325253 462 + 0.5671
NA Noc_2657 Ribonuclease E and Gchromosome CDS3012437 1473 - 0.498982
NA Noc_0430 Class I peptide chain release factorchromosome CDS471114 426 + 0.596244
NA Noc_2249 Cysteine--tRNA ligasechromosome CDS2597100 1458 - 0.524691
NA Noc_1646 RNA methyltransferase TrmH, group 1chromosome CDS1841701 744 + 0.473118
NA Noc_2438 Sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS2784783 549 + 0.471767
NA Noc_0517 GTP-binding protein, HSR1-relatedchromosome CDS557673 1089 + 0.518825
NA Noc_0870 RNA-binding S4chromosome CDS951595 399 - 0.551378
NA Noc_0027 Arginine--tRNA ligasechromosome CDS23931 1758 - 0.479522
NA Noc_2327 Translation elongation factor Gchromosome CDS2666419 2094 - 0.467526
NA Noc_1140 Threonyl-tRNA synthetase, class IIachromosome CDS1248285 1935 + 0.510594
NA Noc_2299 Ribosomal protein L17chromosome CDS2651457 381 - 0.496063
NA Noc_0801 23S rRNA methyltransferase/RumAchromosome CDS873866 1344 + 0.523065
NA Noc_2843 Ribonuclease E and Gchromosome CDS3217844 2295 - 0.508932
NA Noc_2320 Ribosomal protein S19chromosome CDS2662100 273 - 0.490842
NA Noc_2317 Ribosomal protein L16chromosome CDS2660639 414 - 0.492754
NA Noc_2325 Ribosomal protein S10chromosome CDS2664873 315 - 0.457143
NA Noc_2117 Ribosomal protein S15chromosome CDS2439108 270 - 0.466667
NA Noc_2120 Initiation factor 2chromosome CDS2440865 2538 - 0.50788
NA Noc_0883 Poly(A) polymerase, PcnBchromosome CDS965358 1206 + 0.513267
NA Noc_1036 Serine--tRNA ligasechromosome CDS1145100 1284 + 0.521028
NA Noc_0911 Tyrosyl-tRNA synthetase, class Ibchromosome CDS997758 1224 + 0.462418
NA Noc_2258 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2605402 759 - 0.527009
NA Noc_2293 Initiation factor 2B alpha/beta/deltachromosome CDS2646003 1047 - 0.515759
NA Noc_2323 Ribosomal protein L4/L1echromosome CDS2663553 621 - 0.476651
NA Noc_2303 Ribosomal protein S13chromosome CDS2654013 357 - 0.512605
NA Noc_0221 Ribosomal protein S18chromosome CDS244608 225 + 0.48
NA Noc_2431 Nucleotidyl transferasechromosome CDS2778267 672 - 0.541667
NA Noc_2019 Peptide chain release factor 3chromosome CDS2329572 1629 - 0.508287
NA Noc_1144 Phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS1251457 1059 + 0.503305
NA Noc_1940 hypothetical proteinchromosome CDS2219606 1128 - 0.546099
NA Noc_2665 Leucyl-tRNA synthetasechromosome CDS3019065 2460 - 0.518293
NA Noc_0372 Glycine--tRNA ligasechromosome CDS408397 945 + 0.519577
NA Noc_2260 Ribosomal protein S16chromosome CDS2606735 243 - 0.497942
NA Noc_3034 Ribosomal protein L27chromosome CDS3430698 258 + 0.527132
NA Noc_2442 Ribonuclease PHchromosome CDS2787565 720 + 0.525
NA Noc_3014 Peptide deformylasechromosome CDS3407540 504 + 0.468254
NA Noc_0811 Ribosome recycling factorchromosome CDS883964 564 + 0.469858
NA Noc_2338 Translation elongation factor Tuchromosome CDS2681843 1191 - 0.542401
NA Noc_3016 Fmu, rRNA SAM-dependent methyltransferasechromosome CDS3409479 1212 + 0.526403
NA Noc_0065 hypothetical proteinchromosome CDS69540 768 + 0.513021
NA Noc_2321 Ribosomal protein L2chromosome CDS2662398 825 - 0.490909
NA Noc_2626 Elongation factor Pchromosome CDS2980652 570 - 0.496491
NA Noc_0389 Polynucleotide adenylyltransferasechromosome CDS429381 1221 - 0.574939
NA Noc_2641 Ribosomal protein L33chromosome CDS2995204 156 + 0.378205