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2024-05-04 16:48:26

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Nitrobacter winogradskyi Nb-255, Nb-255

Number of genes found: 164

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Nitrobacter winogradskyi Nb-255, Nb-255
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Nwi_0171 3'-5' exonucleasechromosome CDS197468 621 + 0.652174
NA Nwi_2510 Conserved hypothetical protein 92chromosome CDS2728983 1098 - 0.642987
NA Nwi_2781 16S rRNA processing protein RimMchromosome CDS3021428 522 + 0.681992
NA Nwi_1373 Ribosomal protein S17chromosome CDS1504746 249 + 0.574297
NA Nwi_1443 dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS1571189 1050 + 0.659048
NA Nwi_0231 GCN5-related N-acetyltransferasechromosome CDS262732 585 + 0.635897
NA Nwi_1859 Ribosomal protein S2chromosome CDS2038015 999 - 0.622623
NA Nwi_0377 Peptide chain release factor 1chromosome CDS421944 1077 - 0.653668
NA Nwi_1776 seryl-tRNA synthetase, class IIachromosome CDS1946505 1494 - 0.598394
NA Nwi_1378 Ribosomal protein S8chromosome CDS1506629 399 + 0.591479
NA Nwi_2011 conserved hypothetical proteinchromosome CDS2199310 1278 - 0.660407
NA Nwi_0631 possible hypothetical RNA methyltransferasechromosome CDS709531 1269 - 0.690307
NA Nwi_0983 Ribosomal protein L36chromosome CDS1077822 126 + 0.531746
NA Nwi_1360 Ribosomal protein S7chromosome CDS1495787 471 + 0.598726
NA Nwi_1795 queuine/other tRNA-ribosyltransferasechromosome CDS1967318 1134 - 0.656085
NA Nwi_2783 Ribosomal protein L19chromosome CDS3023053 381 + 0.627297
NA Nwi_1394 pseudouridine synthase, RluDchromosome CDS1519738 1239 + 0.650525
NA Nwi_1865 Prolyl-tRNA synthetasechromosome CDS2046923 1320 - 0.615909
NA Nwi_2551 cytidine/deoxycytidylate deaminase, zinc-binding regionchromosome CDS2775668 447 + 0.673378
NA Nwi_3075 ribonuclease P proteinchromosome CDS3339983 336 - 0.633929
NA Nwi_2035 threonyl-tRNA synthetase, class IIachromosome CDS2224074 2061 + 0.632703
NA Nwi_0023 Protein of unknown function DUF448chromosome CDS24107 666 + 0.674174
NA Nwi_0336 peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS377225 816 - 0.628676
NA Nwi_0632 hemolysin Achromosome CDS710792 756 - 0.674603
NA Nwi_2747 Ribosomal protein L31chromosome CDS2986389 228 + 0.578947
NA Nwi_1383 Ribosomal protein L15chromosome CDS1509033 486 + 0.648148
NA Nwi_2533 tRNA synthetase, class II (G, H, P and S)chromosome CDS2751884 1644 - 0.614355
NA Nwi_0312 translation initiation factor IF-1chromosome CDS350696 282 - 0.624114
NA Nwi_2550 pseudouridine synthase, Rsuchromosome CDS2773349 2043 - 0.675477
NA Nwi_1421 Ribosomal protein L13chromosome CDS1548826 474 + 0.605485
NA Nwi_1386 Ribosomal protein S13chromosome CDS1512326 369 + 0.585366
NA Nwi_1858 elongation factor Tschromosome CDS2036966 924 - 0.625541
NA Nwi_1387 Ribosomal protein S11chromosome CDS1512804 393 + 0.633588
NA Nwi_1347 Ribosomal protein L1chromosome CDS1477457 693 + 0.637807
NA Nwi_2615 YbhB and YbcLchromosome CDS2843615 744 + 0.612903
NA Nwi_0117 glutathione synthetasechromosome CDS137378 954 + 0.637317
NA Nwi_0178 sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS203809 597 + 0.629816
NA Nwi_3076 Ribosomal protein L34chromosome CDS3340341 252 - 0.686508
NA Nwi_0441 GCN5-related N-acetyltransferasechromosome CDS497178 609 + 0.638752
NA Nwi_0025 ribosome-binding factor Achromosome CDS27584 441 + 0.600907
NA Nwi_1381 Ribosomal protein S5chromosome CDS1508065 576 + 0.661458
NA Nwi_2609 conserved hypothetical proteinchromosome CDS2837017 1047 + 0.672397
NA Nwi_1361 translation elongation factor Gchromosome CDS1496290 2073 + 0.607815
NA Nwi_0067 Ribosomal protein L20chromosome CDS80156 360 - 0.658333
NA Nwi_0417 2',5' RNA ligasechromosome CDS467986 537 + 0.66108
NA Nwi_2877 conserved hypothetical proteinchromosome CDS3108006 960 - 0.555208
NA Nwi_1694 Ribosomal protein L9chromosome CDS1845747 609 + 0.64532
NA Nwi_0610 conserved hypothetical proteinchromosome CDS689695 975 + 0.633846
NA Nwi_0028 3'exoribonucleasechromosome CDS29730 2157 + 0.656931
NA Nwi_1375 Ribosomal protein L24chromosome CDS1505402 315 + 0.622222
NA Nwi_1127 tetratricopeptide TPR_4 proteinchromosome CDS1236213 3744 + 0.650641
NA Nwi_3064 formylmethionine deformylasechromosome CDS3330017 564 + 0.609929
NA Nwi_3143 Ribosomal protein S20pchromosome CDS3400955 267 + 0.617977
NA Nwi_1316 Ribosomal protein S4chromosome CDS1447600 618 - 0.590615
NA Nwi_1367 Ribosomal protein L2chromosome CDS1501791 834 + 0.625899
NA Nwi_0439 Ribosomal protein L21chromosome CDS496243 441 + 0.639456
NA Nwi_2696 Sua5/YciO/YrdC/YwlCchromosome CDS2928685 987 + 0.70922
NA Nwi_2367 Ribosomal L11 methyltransferasechromosome CDS2587694 966 + 0.684265
NA Nwi_1368 Ribosomal protein S19chromosome CDS1502640 279 + 0.580645
NA Nwi_1427 endoribonuclease L-PSPchromosome CDS1553764 468 - 0.641026
NA Nwi_1362 translation elongation factor Tuchromosome CDS1498402 1191 + 0.61293
NA Nwi_0314 DEAD/DEAH box helicasechromosome CDS351424 1431 - 0.6471
NA Nwi_1692 Ribosomal protein S18chromosome CDS1844325 240 + 0.641667
NA Nwi_0409 helicasechromosome CDS455942 3375 + 0.676741
NA Nwi_1657 DEAD/DEAH box helicasechromosome CDS1802960 1452 + 0.647383
NA Nwi_0027 Ribosomal protein S15chromosome CDS29114 270 + 0.596296
NA Nwi_1287 alanyl-tRNA synthetase, class IIcchromosome CDS1420243 2676 + 0.658819
NA Nwi_1403 SmpA/OmlAchromosome CDS1528670 501 - 0.618762
NA Nwi_2511 peptidyl-tRNA hydrolasechromosome CDS2730280 609 - 0.623974
NA Nwi_0944 hypothetical proteinchromosome CDS1035627 441 - 0.564626
NA Nwi_2344 tRNA isopentenyltransferasechromosome CDS2564960 945 - 0.674074
NA Nwi_1643 elongation factor Pchromosome CDS1785169 567 + 0.631393
NA Nwi_1715 peptide chain release factor 2chromosome CDS1870271 969 - 0.624355
NA Nwi_0406 ribosomal protein L28chromosome CDS453944 294 - 0.588435
NA Nwi_1370 ribosomal protein S3chromosome CDS1503334 696 + 0.626437
NA Nwi_2512 Ribosomal protein L25chromosome CDS2730904 687 - 0.668122
NA Nwi_1349 Ribosomal protein L7/L12chromosome CDS1479427 378 + 0.645503
NA Nwi_0999 Ribosomal protein S21chromosome CDS1095758 288 - 0.635417
NA Nwi_1363 Ribosomal protein S10chromosome CDS1499694 309 + 0.585761
NA Nwi_2782 tRNA (guanine-N1-)-methyltransferasechromosome CDS3022113 720 + 0.676389
NA Nwi_1380 Ribosomal protein L18chromosome CDS1507644 363 + 0.619835
NA Nwi_1433 Ribosomal protein L33chromosome CDS1559427 168 - 0.529762
NA Nwi_1588 aspartyl-tRNA synthetasechromosome CDS1734710 1773 - 0.622673
NA Nwi_2277 amidasechromosome CDS2484111 1350 - 0.679259
NA Nwi_2618 tRNA/rRNA methyltransferase (SpoU)chromosome CDS2847437 471 + 0.649682
NA Nwi_1359 Ribosomal protein S12chromosome CDS1495400 372 + 0.610215
NA Nwi_0014 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS13929 1434 + 0.658298
NA Nwi_2431 pseudouridine synthase, RluDchromosome CDS2652806 1056 - 0.628788
NA Nwi_0461 conserved hypothetical proteinchromosome CDS517624 1173 + 0.652174
NA Nwi_1844 glutamyl-tRNA synthetasechromosome CDS2021064 1491 + 0.625084
NA Nwi_2542 isoleucyl-tRNA synthetase, class Iachromosome CDS2762248 3000 + 0.639
NA Nwi_2586 glycyl-tRNA synthetase, beta subunitchromosome CDS2809191 2184 - 0.621337
NA Nwi_1436 valyl-tRNA synthetase, class Iachromosome CDS1562869 2859 + 0.626793
NA Nwi_2817 dihydrouridine synthase TIM-barrel protein yjbNchromosome CDS3054930 1023 - 0.600196
NA Nwi_3065 methionyl-tRNA formyltransferasechromosome CDS3330613 945 + 0.674074
NA Nwi_1371 Ribosomal protein L16chromosome CDS1504109 414 + 0.678744
NA Nwi_2775 2-methylthioadenine synthetasechromosome CDS3015393 1269 - 0.665879
NA Nwi_2150 ribosomal RNA methyltransferase RrmJ/FtsJchromosome CDS2347545 693 - 0.642136
NA Nwi_1379 Ribosomal protein L6chromosome CDS1507099 534 + 0.623595
NA Nwi_2027 peptide chain release factor 3chromosome CDS2218049 1620 - 0.633951
NA Nwi_2144 tRNA and rRNA cytosine-C5-methylaseschromosome CDS2341024 1299 - 0.659738
NA Nwi_0068 Ribosomal protein L35chromosome CDS80581 201 - 0.58209
NA Nwi_0206 Ribosomal protein S1chromosome CDS236083 1704 - 0.624413
NA Nwi_1422 Ribosomal protein S9chromosome CDS1549302 477 + 0.645702
NA Nwi_2780 Ribosomal protein S16chromosome CDS3021083 333 + 0.678679
NA Nwi_2062 RNA methyltransferase TrmH, group 3chromosome CDS2251111 852 + 0.669014
NA Nwi_1364 Ribosomal protein L3chromosome CDS1500104 744 + 0.630376
NA Nwi_2001 glutamyl-tRNA(Gln) amidotransferase A subunitchromosome CDS2189383 1476 - 0.649729
NA Nwi_2587 glycyl-tRNA synthetase, alpha subunitchromosome CDS2811378 945 - 0.628571
NA Nwi_1462 methionyl-tRNA synthetase, class Iachromosome CDS1593574 2079 - 0.6152
NA Nwi_1589 ribonuclease Dchromosome CDS1736709 1149 + 0.637946
NA Nwi_0748 glutamyl-tRNA synthetase, class Icchromosome CDS834359 873 + 0.657503
NA Nwi_0376 modification methylase HemKchromosome CDS420976 897 - 0.695652
NA Nwi_1843 glutaminyl-tRNA synthetasechromosome CDS2019217 1680 - 0.63869
NA Nwi_0440 Ribosomal protein L27chromosome CDS496769 273 + 0.615385
NA Nwi_1377 Ribosomal protein S14chromosome CDS1506310 306 + 0.620915
NA Nwi_1348 Ribosomal protein L10chromosome CDS1478680 693 + 0.627706
NA Nwi_0315 pseudouridine synthasechromosome CDS353099 795 - 0.667925
NA Nwi_1807 arginyl-tRNA synthetase, class Icchromosome CDS1980172 1794 - 0.627648
NA Nwi_0151 lysyl-tRNA synthetase class 1cchromosome CDS175870 1632 + 0.630515
NA Nwi_0193 ribonuclease PHchromosome CDS223063 714 - 0.655462
NA Nwi_0410 RNA-binding S4chromosome CDS459432 294 + 0.636054
NA Nwi_1382 Ribosomal protein L30chromosome CDS1508719 195 + 0.589744
NA Nwi_0603 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS682417 1203 + 0.657523
NA Nwi_1172 Phage conserved hypothetical protein, phiE125 gp8chromosome CDS1280428 564 + 0.66844
NA Nwi_1682 RRNA 16S rRNA dimethylasechromosome CDS1835075 864 + 0.633102
NA Nwi_2491 GCN5-related N-acetyltransferasechromosome CDS2713178 594 - 0.617845
NA Nwi_0128 GCN5-related N-acetyltransferasechromosome CDS148243 480 + 0.660417
NA Nwi_1796 Queuosine biosynthesis proteinchromosome CDS1968448 1083 - 0.633426
NA Nwi_3066 tRNA pseudouridine synthasechromosome CDS3331557 768 + 0.653646
NA Nwi_1668 tyrosyl-tRNA synthetase, class Ibchromosome CDS1815311 1254 + 0.607656
NA Nwi_0156 tRNA and rRNA cytosine-C5-methylaseschromosome CDS180146 1353 + 0.684405
NA Nwi_1720 ribonuclease E and Gchromosome CDS1878284 3180 + 0.633019
NA Nwi_2522 modification methylase HemKchromosome CDS2742681 1023 - 0.659824
NA Nwi_0026 tRNA pseudouridine synthase Bchromosome CDS28031 1077 + 0.662953
NA Nwi_0216 tryptophanyl-tRNA synthetase, class Ibchromosome CDS245916 1044 - 0.614943
NA Nwi_1764 Gid proteinchromosome CDS1934176 1434 + 0.652022
NA Nwi_2529 ribonuclease T2chromosome CDS2749326 690 - 0.66087
NA Nwi_1365 Ribosomal protein L4/L1echromosome CDS1500849 621 + 0.619968
NA Nwi_2003 glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS2191076 288 - 0.586806
NA Nwi_1997 glutamyl-tRNA(Gln) amidotransferase B subunitchromosome CDS2184822 1485 - 0.62963
NA Nwi_1374 Ribosomal protein L14chromosome CDS1505034 369 + 0.598916
NA Nwi_1691 Ribosomal protein S6chromosome CDS1843900 420 + 0.607143
NA Nwi_1366 Ribosomal L23 proteinchromosome CDS1501466 297 + 0.575758
NA Nwi_0091 leucyl-tRNA synthetase class Iachromosome CDS107151 2652 + 0.648944
NA Nwi_0066 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS78930 1110 - 0.630631
NA Nwi_1372 Ribosomal protein L29chromosome CDS1504528 207 + 0.613527
NA Nwi_1369 Ribosomal protein L22chromosome CDS1502929 387 + 0.627907
NA Nwi_0069 initiation factor 3chromosome CDS81110 516 - 0.593023
NA Nwi_1856 ribosome recycling factorchromosome CDS2035585 564 - 0.569149
NA Nwi_0718 hypothetical proteinchromosome CDS803845 330 - 0.542424
NA Nwi_3004 TPR repeat proteinchromosome CDS3250656 3249 + 0.647276
NA Nwi_2547 class I peptide chain release factorchromosome CDS2770154 420 + 0.67381
NA Nwi_0024 initiation factor 2chromosome CDS24841 2616 + 0.676223
NA Nwi_0048 nucleotidyl transferasechromosome CDS55254 726 + 0.680441
NA Nwi_1642 tRNA synthetase, class II (D, K and N)chromosome CDS1783981 1044 - 0.663793
NA Nwi_2622 polynucleotide adenylyltransferase regionchromosome CDS2849949 1257 - 0.692124
NA Nwi_1228 cysteinyl-tRNA synthetase, class Iachromosome CDS1351226 1434 + 0.590656
NA Nwi_0497 Ribosomal protein S32chromosome CDS554512 186 + 0.623656
NA Nwi_1389 Ribosomal protein L17chromosome CDS1514441 417 + 0.597122
NA Nwi_2978 Small GTP-binding proteinchromosome CDS3219524 2091 - 0.649928
NA Nwi_1842 ComEC/Rec2-related proteinchromosome CDS2016794 2337 - 0.664955
NA Nwi_1376 Ribosomal protein L5chromosome CDS1505709 558 + 0.602151
NA Nwi_1346 Ribosomal protein L11chromosome CDS1477022 429 + 0.606061