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2024-05-04 01:10:57

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Thiomicrospira crunogena XCL-2, XCL-2

Number of genes found: 167

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Thiomicrospira crunogena XCL-2, XCL-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tcr_1657 dimethyladenosine transferasechromosome CDS1811576 801 + 0.451935
NA Tcr_0923 cysteinyl-tRNA synthetasechromosome CDS998956 1371 + 0.428155
NA Tcr_0354 glycyl-tRNA synthetase, alpha subunitchromosome CDS402419 927 + 0.456311
NA Tcr_0099 von Willebrand factor, type Achromosome CDS125898 1956 + 0.473415
NA Tcr_1883 DEAD/DEAH box helicase-likechromosome CDS2060218 1206 + 0.450249
NA Tcr_0944 Pseudouridine synthase, Rsuchromosome CDS1018919 786 + 0.459288
NA Tcr_1075 prolyl-tRNA synthetasechromosome CDS1153064 1719 - 0.486911
NA Tcr_0388 modification methylase, HemK familychromosome CDS437623 840 - 0.494048
NA Tcr_0316 Ribosomal protein S13chromosome CDS357142 357 + 0.40056
NA Tcr_1216 glutamyl-tRNA synthetasechromosome CDS1332632 1413 - 0.450106
NA Tcr_1107 Alpha-L-glutamate ligase-related proteinchromosome CDS1191008 945 + 0.450794
NA Tcr_0016 RNA-binding S4chromosome CDS20509 378 - 0.468254
NA Tcr_1614 Cytidine/deoxycytidylate deaminase, zinc-binding regionchromosome CDS1768298 501 - 0.469062
NA Tcr_2061 S6 modification enzyme RimKchromosome CDS2276601 906 + 0.477925
NA Tcr_1628 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS1780950 1455 - 0.471478
NA Tcr_1951 tRNA/rRNA methyltransferase (SpoU)chromosome CDS2144456 465 + 0.47957
NA Tcr_0192 methionyl-tRNA formyltransferasechromosome CDS226439 939 - 0.525027
NA Tcr_1235 asparaginasechromosome CDS1350820 510 + 0.447059
NA Tcr_0296 Ribosomal protein L4/L1echromosome CDS347594 621 + 0.413849
NA Tcr_1282 ribosome recycling factorchromosome CDS1397969 558 - 0.40681
NA Tcr_1768 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-likechromosome CDS1929870 909 + 0.456546
NA Tcr_1590 alanyl-tRNA synthetasechromosome CDS1739654 2595 - 0.462042
NA Tcr_1230 Sua5/YciO/YrdC/YwlCchromosome CDS1347503 624 - 0.458333
NA Tcr_2194 RNA methyltransferase, TrmA familychromosome CDS2420636 1224 - 0.452614
NA Tcr_1129 Polyribonucleotide nucleotidyltransferasechromosome CDS1217584 2085 + 0.448441
NA Tcr_1919 ribosomal protein L33chromosome CDS2101054 153 + 0.30719
NA Tcr_0890 aspartyl-tRNA synthetasechromosome CDS969380 1791 + 0.446119
NA Tcr_1629 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS1782424 288 - 0.40625
NA Tcr_1894 hypothetical proteinchromosome CDS2073191 498 - 0.425703
NA Tcr_1361 ribosomal protein L9chromosome CDS1477460 453 - 0.403974
NA Tcr_0650 ribosomal protein L19chromosome CDS727292 348 + 0.405172
NA Tcr_0922 glutaminyl-tRNA synthetasechromosome CDS997277 1680 + 0.439881
NA Tcr_0306 ribosomal protein L24chromosome CDS352070 315 + 0.384127
NA Tcr_0972 sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS1052997 336 - 0.369048
NA Tcr_1113 translation initiation factor IF-1chromosome CDS1197902 219 - 0.415525
NA Tcr_0240 metal dependent phosphohydrolasechromosome CDS284760 1251 + 0.483613
NA Tcr_0355 glycyl-tRNA synthetase, beta subunitchromosome CDS403347 2073 + 0.470333
NA Tcr_1690 Nucleotidyl transferasechromosome CDS1844446 774 - 0.401809
NA Tcr_1015 DEAD/DEAH box helicase-likechromosome CDS1093814 1182 - 0.485618
NA Tcr_0279 Pseudouridine synthasechromosome CDS326841 759 - 0.440053
NA Tcr_0318 ribosomal protein S4chromosome CDS357925 621 + 0.389694
NA Tcr_0292 translation elongation factor Gchromosome CDS343110 2103 + 0.43224
NA Tcr_0314 ribosomal protein L15chromosome CDS355293 435 + 0.416092
NA Tcr_0286 Ribosomal protein L10chromosome CDS332622 501 + 0.421158
NA Tcr_1284 translation elongation factor Tschromosome CDS1399493 885 - 0.429379
NA Tcr_1286 methionine aminopeptidase, type Ichromosome CDS1401405 807 + 0.428748
NA Tcr_0024 beta-lactamase-likechromosome CDS27634 1398 + 0.424893
NA Tcr_1198 ribosomal protein S1chromosome CDS1311395 1674 + 0.413978
NA Tcr_0305 ribosomal protein L14chromosome CDS351691 369 + 0.414634
NA Tcr_1128 ribosomal protein S15chromosome CDS1217038 267 + 0.382022
NA Tcr_0725 peptide chain release factor 2chromosome CDS796531 999 + 0.468468
NA Tcr_0342 ribosomal protein L27chromosome CDS390885 258 + 0.430233
NA Tcr_0302 ribosomal protein L16chromosome CDS350687 414 + 0.42029
NA Tcr_0948 DEAD/DEAH box helicase-likechromosome CDS1022792 1407 - 0.46624
NA Tcr_1665 ribosomal protein L35chromosome CDS1818673 198 - 0.409091
NA Tcr_0125 ribosomal protein L31chromosome CDS158115 252 - 0.392857
NA Tcr_0295 Ribosomal protein L3chromosome CDS346945 639 + 0.400626
NA Tcr_0649 tRNA (guanine-N1)-methyltransferasechromosome CDS726478 714 + 0.452381
NA Tcr_1809 ribosomal protein S21chromosome CDS1986100 216 - 0.449074
NA Tcr_1627 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS1779507 1428 - 0.452381
NA Tcr_1503 valyl-tRNA synthetasechromosome CDS1628046 2775 + 0.430631
NA Tcr_1793 Amidasechromosome CDS1965633 1797 + 0.48414
NA Tcr_1652 Nucleotidyl transferasechromosome CDS1804846 699 - 0.483548
NA Tcr_1582 3'-5' exonucleasechromosome CDS1731230 1158 + 0.423143
NA Tcr_0442 ribosomal protein L11 methyltransferasechromosome CDS494930 885 - 0.462147
NA Tcr_0647 ribosomal protein S16chromosome CDS725658 243 + 0.460905
NA Tcr_1370 Pseudouridine synthase, RluDchromosome CDS1484940 1059 - 0.464589
NA Tcr_1741 translation elongation factor Pchromosome CDS1900870 567 - 0.43739
NA Tcr_1124 ribosome-binding factor Achromosome CDS1214253 366 + 0.385246
NA Tcr_0299 ribosomal protein S19chromosome CDS349358 273 + 0.373626
NA Tcr_0473 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS529689 1434 + 0.444909
NA Tcr_0285 ribosomal protein L1chromosome CDS331749 696 + 0.41523
NA Tcr_0970 peptide chain release factor 3chromosome CDS1049288 1575 + 0.43873
NA Tcr_0389 peptide chain release factor 1chromosome CDS438492 1092 - 0.486264
NA Tcr_2150 YjgF-like proteinchromosome CDS2373355 387 + 0.44186
NA Tcr_0811 Ribosomal RNA methyltransferase RrmJ/FtsJchromosome CDS883198 621 + 0.431562
NA Tcr_0213 Methyltransferase smallchromosome CDS253731 579 + 0.450777
NA Tcr_1285 ribosomal protein S2chromosome CDS1400468 747 - 0.402945
NA Tcr_0193 Peptide deformylasechromosome CDS227374 510 - 0.435294
NA Tcr_0307 Ribosomal protein L5chromosome CDS352397 543 + 0.372007
NA Tcr_0294 ribosomal protein S10chromosome CDS346571 312 + 0.419872
NA Tcr_1489 RNA methyltransferase TrmH, group 3chromosome CDS1609932 735 - 0.453061
NA Tcr_0317 Ribosomal protein S11chromosome CDS357519 390 + 0.441026
NA Tcr_1664 ribosomal protein L20chromosome CDS1818304 357 - 0.422969
NA Tcr_0461 ribosomal protein L13chromosome CDS517270 429 + 0.41958
NA Tcr_1506 ribonuclease, Rne/Rng familychromosome CDS1641837 1473 - 0.415479
NA Tcr_0790 Elongation factor P/YeiPchromosome CDS863315 567 + 0.45679
NA Tcr_0184 2',5' RNA ligasechromosome CDS216637 558 + 0.464158
NA Tcr_0479 leucyl-tRNA synthetasechromosome CDS535794 2634 + 0.479119
NA Tcr_0290 ribosomal protein S12chromosome CDS342142 375 + 0.44
NA Tcr_1740 Lysine--tRNA ligasechromosome CDS1899878 975 - 0.473846
NA Tcr_0173 tRNA (uracil-5-)-methyltransferasechromosome CDS207067 1125 + 0.434667
NA Tcr_0309 Ribosomal protein S8chromosome CDS353267 396 + 0.391414
NA Tcr_0303 ribosomal protein L29chromosome CDS351102 189 + 0.343915
NA Tcr_1949 tyrosyl-tRNA synthetasechromosome CDS2142266 1197 - 0.429407
NA Tcr_0708 ribosomal protein L32chromosome CDS777789 174 + 0.425287
NA Tcr_0615 RNA methyltransferase TrmH, group 1chromosome CDS691200 807 + 0.438662
NA Tcr_0655 Pseudouridine synthasechromosome CDS731872 726 - 0.432507
NA Tcr_0019 SUA5/yciO/yrdC-likechromosome CDS22776 561 - 0.468806
NA Tcr_0341 ribosomal protein L21chromosome CDS390471 315 + 0.409524
NA Tcr_1100 Pseudouridine synthase, Rsuchromosome CDS1182571 558 - 0.462366
NA Tcr_0304 Ribosomal protein S17chromosome CDS351293 264 + 0.378788
NA Tcr_1406 SmpA/OmlAchromosome CDS1519126 354 + 0.415254
NA Tcr_0284 ribosomal protein L11chromosome CDS331321 429 + 0.410256
NA Tcr_0768 seryl-tRNA synthetasechromosome CDS837870 1287 + 0.4662
NA Tcr_0308 Ribosomal protein S14chromosome CDS352949 306 + 0.372549
NA Tcr_1328 Pseudouridine synthase RluA-likechromosome CDS1443019 717 - 0.478382
NA Tcr_1334 S-adenosylmethioninechromosome CDS1449099 1056 - 0.475379
NA Tcr_0478 hypothetical proteinchromosome CDS535346 429 - 0.398601
NA Tcr_0293 translation elongation factor Tuchromosome CDS345247 1191 + 0.442485
NA Tcr_1333 queuine tRNA-ribosyltransferasechromosome CDS1447974 1113 - 0.472597
NA Tcr_1663 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS1817025 999 - 0.446446
NA Tcr_1546 modification methylase, HemK familychromosome CDS1688553 933 - 0.440514
NA Tcr_0311 ribosomal protein L18chromosome CDS354224 354 + 0.423729
NA Tcr_1099 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1181419 1140 - 0.446491
NA Tcr_0395 GTP-binding protein, HSR1-relatedchromosome CDS445633 1092 + 0.473443
NA Tcr_1667 threonyl-tRNA synthetasechromosome CDS1819674 1929 - 0.438051
NA Tcr_0298 ribosomal protein L2chromosome CDS348519 828 + 0.437198
NA Tcr_1210 TIM-barrel protein, yjbN familychromosome CDS1322638 1074 - 0.459963
NA Tcr_0495 isoleucyl-tRNA synthetasechromosome CDS550852 2832 + 0.465749
NA Tcr_0875 Class I peptide chain release factorchromosome CDS954195 417 + 0.453237
NA Tcr_1530 tryptophanyl-tRNA synthetasechromosome CDS1667238 1005 + 0.430846
NA Tcr_2199 ribosomal protein L34chromosome CDS2425980 135 - 0.474074
NA Tcr_1644 hypothetical proteinchromosome CDS1797197 735 + 0.353741
NA Tcr_0191 sun proteinchromosome CDS225125 1311 - 0.472159
NA Tcr_0393 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5chromosome CDS444346 582 + 0.443299
NA Tcr_0703 ribonuclease, Rne/Rng familychromosome CDS771960 2259 - 0.448871
NA Tcr_0312 ribosomal protein S5chromosome CDS354592 510 + 0.423529
NA Tcr_0291 ribosomal protein S7chromosome CDS342575 474 + 0.419831
NA Tcr_1918 ribosomal protein L28chromosome CDS2100806 237 + 0.396624
NA Tcr_1363 ribosomal protein S18chromosome CDS1478871 228 - 0.368421
NA Tcr_0297 Ribosomal L23 proteinchromosome CDS348211 297 + 0.367003
NA Tcr_0310 Ribosomal protein L6chromosome CDS353675 534 + 0.383895
NA Tcr_2198 ribonuclease P protein componentchromosome CDS2425482 489 - 0.408998
NA Tcr_0801 tRNA pseudouridine synthase Achromosome CDS873604 789 + 0.460076
NA Tcr_2009 DEAD/DEAH box helicase-likechromosome CDS2214284 1725 + 0.45971
NA Tcr_1825 Glutathione synthetasechromosome CDS2001641 966 + 0.458592
NA Tcr_1123 translation initiation factor IF-2chromosome CDS1211676 2457 + 0.437118
NA Tcr_1528 poly(A) polymerasechromosome CDS1664683 1455 - 0.439863
NA Tcr_0198 arginyl-tRNA synthetasechromosome CDS234547 1779 + 0.471613
NA Tcr_1666 Initiation factor 3chromosome CDS1819093 339 - 0.424779
NA Tcr_1708 Pseudouridine synthasechromosome CDS1868890 903 + 0.44629
NA Tcr_0726 lysyl-tRNA synthetasechromosome CDS797594 1515 + 0.448185
NA Tcr_0287 ribosomal protein L7/L12chromosome CDS333162 372 + 0.432796
NA Tcr_0167 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS198137 450 - 0.471111
NA Tcr_0394 peptidyl-tRNA hydrolasechromosome CDS444961 579 + 0.493955
NA Tcr_0313 ribosomal protein L30chromosome CDS355094 198 + 0.363636
NA Tcr_0704 Pseudouridine synthase, RluDchromosome CDS774886 939 + 0.43557
NA Tcr_1314 conserved hypothetical proteinchromosome CDS1430349 1362 - 0.48605
NA Tcr_0301 ribosomal protein S3chromosome CDS349986 687 + 0.398836
NA Tcr_0300 ribosomal protein L22chromosome CDS349642 333 + 0.384384
NA Tcr_0810 Protein of unknown function UPF0044chromosome CDS882715 306 - 0.366013
NA Tcr_0648 16S rRNA processing protein RimMchromosome CDS725921 546 + 0.445055
NA Tcr_0492 ribosomal protein S20chromosome CDS547783 264 + 0.412879
NA Tcr_1270 ribosomal protein L36chromosome CDS1386608 126 + 0.325397
NA Tcr_1364 ribosomal protein S6chromosome CDS1479098 345 - 0.408696
NA Tcr_1597 Glutathione synthasechromosome CDS1749493 1053 + 0.407407
NA Tcr_0441 Dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS493957 963 - 0.468328
NA Tcr_1085 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1166737 975 + 0.46359
NA Tcr_1228 Pseudouridine synthase, Rsuchromosome CDS1345820 954 - 0.469602
NA Tcr_0320 ribosomal protein L17chromosome CDS359579 387 + 0.400517
NA Tcr_0622 histidyl-tRNA synthetasechromosome CDS695960 1281 + 0.441842
NA Tcr_0462 Ribosomal protein S9chromosome CDS517712 393 + 0.435115
NA Tcr_1125 tRNA pseudouridine synthase Bchromosome CDS1214650 912 + 0.439693
NA Tcr_0779 DEAD/DEAH box helicase-likechromosome CDS853629 1338 - 0.470105
NA Tcr_0281 translation elongation factor Tuchromosome CDS328921 1191 + 0.442485
NA Tcr_1802 conserved hypothetical proteinchromosome CDS1977986 849 - 0.504122