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2024-04-28 22:48:37

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Chlorobium chlorochromatii CaD3, CaD3

Number of genes found: 135

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Chlorobium chlorochromatii CaD3, CaD3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Cag_0070 Arginyl-tRNA synthetase, class Icchromosome CDS77346 1659 - 0.443038
NA Cag_1850 50S ribosomal protein L4chromosome CDS2358855 627 - 0.403509
NA Cag_0036 Glycyl-tRNA synthetase, alpha2 dimerchromosome CDS38299 1470 - 0.493197
NA Cag_0346 Translation elongation factor Gchromosome CDS392155 2076 - 0.444605
NA Cag_1823 Ribosomal protein L17chromosome CDS2344992 465 - 0.402151
NA Cag_1848 Ribosomal protein L2chromosome CDS2357643 840 - 0.435714
NA Cag_1713 Ribosomal protein L35chromosome CDS2226194 195 - 0.466667
NA Cag_1712 Ribosomal protein L20chromosome CDS2225816 348 - 0.445402
NA Cag_0722 HDIGchromosome CDS996712 1431 - 0.491265
NA Cag_0814 conserved hypothetical proteinchromosome CDS1140990 513 - 0.461988
NA Cag_1735 SpoU rRNA methylase family proteinchromosome CDS2254245 798 - 0.506266
NA Cag_0310 conserved hypothetical proteinchromosome CDS345544 513 + 0.323587
NA Cag_0010 Peptide chain release factor 1chromosome CDS13563 1074 + 0.496276
NA Cag_0542 Pseudouridine synthase, Rsuchromosome CDS646079 756 + 0.481481
NA Cag_0523 Isoleucyl-tRNA synthetase, class Iachromosome CDS608416 3252 + 0.469865
NA Cag_1355 Initiation factor 2B alpha/beta/deltachromosome CDS1820661 1131 + 0.451813
NA Cag_1851 50S ribosomal protein L3chromosome CDS2359502 630 - 0.419048
NA Cag_1035 hypothetical proteinchromosome CDS1406113 534 + 0.473783
NA Cag_0242 Dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS273517 1047 + 0.489016
NA Cag_0570 RNA binding S1chromosome CDS675279 1779 - 0.422709
NA Cag_1161 Tyrosyl-tRNA synthetase, class Ibchromosome CDS1555089 1209 - 0.455749
NA Cag_1846 Ribosomal protein L22chromosome CDS2356923 360 - 0.416667
NA Cag_1743 Ribosomal protein L28chromosome CDS2262568 219 + 0.415525
NA Cag_0487 Methionyl-tRNA formyltransferasechromosome CDS568475 945 - 0.512169
NA Cag_1845 ribosomal protein S3chromosome CDS2356148 762 - 0.422572
NA Cag_0327 Ribosomal protein L31chromosome CDS364870 213 - 0.42723
NA Cag_1119 Fmu, rRNA SAM-dependent methyltransferasechromosome CDS1509145 1290 - 0.494574
NA Cag_1873 Glutamyl-tRNA(Gln) amidotransferase B subunitchromosome CDS2380313 1428 - 0.461485
NA Cag_1847 Ribosomal protein S19chromosome CDS2357313 297 - 0.40404
NA Cag_1288 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1752971 1026 - 0.488304
NA Cag_0804 Ribosomal protein S16chromosome CDS1127329 411 - 0.452555
NA Cag_0023 Peptide chain release factor 2chromosome CDS23776 939 + 0.478168
NA Cag_1825 Ribosomal protein S4chromosome CDS2346512 612 - 0.426471
NA Cag_1828 Ribosomal protein L36chromosome CDS2347997 117 - 0.401709
NA Cag_0369 Alanyl-tRNA synthetase, class IIcchromosome CDS424216 2661 + 0.485532
NA Cag_1840 Ribosomal protein L24chromosome CDS2354358 270 - 0.381481
NA Cag_0096 Ribosomal protein S18chromosome CDS110910 279 + 0.401434
NA Cag_1689 RNA binding S1chromosome CDS2192915 2187 - 0.460905
NA Cag_1839 50S ribosomal protein L5chromosome CDS2353709 588 - 0.403061
NA Cag_0190 cytosine deaminase, putativechromosome CDS217771 462 - 0.463203
NA Cag_0318 Glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS354786 288 + 0.444444
NA Cag_1711 Phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS2224770 1035 - 0.494686
NA Cag_0566 Protein of unknown function UPF0004chromosome CDS670534 1413 - 0.479122
NA Cag_0465 Glutamyl-tRNA(Gln) amidotransferase A subunitchromosome CDS546260 1425 + 0.482105
NA Cag_1833 Ribosomal protein L30chromosome CDS2351236 192 - 0.359375
NA Cag_1089 Peptidyl-tRNA hydrolasechromosome CDS1470466 654 - 0.461774
NA Cag_1380 tRNA pseudouridine synthasechromosome CDS1844279 732 - 0.5
NA Cag_0802 tRNA (guanine-N1-)-methyltransferasechromosome CDS1126066 696 - 0.443966
NA Cag_1834 Ribosomal protein S5chromosome CDS2351443 519 - 0.400771
NA Cag_0713 Protein of unknown function UPF0004chromosome CDS987538 1317 + 0.474563
NA Cag_1852 Ribosomal protein S10chromosome CDS2360158 312 - 0.413462
NA Cag_1818 Cysteinyl-tRNA synthetase, class Iachromosome CDS2340235 1443 + 0.472626
NA Cag_1826 30S ribosomal protein S11chromosome CDS2347158 384 - 0.434896
NA Cag_1170 conserved hypothetical proteinchromosome CDS1564900 1164 - 0.393471
NA Cag_1506 conserved hypothetical proteinchromosome CDS1975615 339 + 0.353982
NA Cag_0326 Ribosome recycling factorchromosome CDS364260 561 - 0.42246
NA Cag_0995 hypothetical proteinchromosome CDS1339426 279 + 0.426523
NA Cag_1650 Ribosomal protein L13chromosome CDS2147212 456 - 0.434211
NA Cag_1856 Ribosomal protein S12chromosome CDS2364439 414 - 0.471014
NA Cag_1843 Ribosomal protein L29chromosome CDS2355455 198 - 0.39899
NA Cag_0392 Glutamyl-tRNA synthetasechromosome CDS456112 1509 + 0.451292
NA Cag_1087 SpoU rRNA methylase family proteinchromosome CDS1469078 555 + 0.499099
NA Cag_0864 Ribosomal protein L21chromosome CDS1197031 291 - 0.429553
NA Cag_1989 Ribonuclease E and Gchromosome CDS2525145 1707 + 0.469244
NA Cag_1855 Ribosomal protein S7chromosome CDS2363940 468 - 0.41453
NA Cag_1731 RNA methyltransferase TrmH, group 3chromosome CDS2250436 747 + 0.485944
NA Cag_1577 conserved hypothetical proteinchromosome CDS2060872 279 + 0.408602
NA Cag_0456 Ribosomal protein S20pchromosome CDS535338 282 + 0.439716
NA Cag_0208 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS236460 1350 + 0.497778
NA Cag_0097 Ribosomal protein L9chromosome CDS111223 456 + 0.436404
NA Cag_1666 Ribosomal protein S32chromosome CDS2164809 189 - 0.502645
NA Cag_0353 Ribosomal protein L11chromosome CDS400525 426 + 0.422535
NA Cag_1649 30S ribosomal protein S9chromosome CDS2146798 390 - 0.451282
NA Cag_1763 conserved hypothetical proteinchromosome CDS2280006 321 + 0.392523
NA Cag_2033 Ribosomal protein L34chromosome CDS2571689 156 - 0.429487
NA Cag_1837 30S ribosomal protein S8chromosome CDS2352967 396 - 0.366162
NA Cag_1715 Threonyl-tRNA synthetase, class IIachromosome CDS2227260 1974 - 0.478723
NA Cag_1116 DEAD/DEAH box helicase-likechromosome CDS1505789 1923 + 0.49038
NA Cag_0928 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1262809 1041 + 0.381364
NA Cag_1832 Ribosomal protein L15chromosome CDS2350647 555 - 0.41982
NA Cag_1460 tRNA pseudouridine synthase Bchromosome CDS1925459 768 - 0.503906
NA Cag_1156 Ribosomal protein L25chromosome CDS1550095 588 + 0.430272
NA Cag_1844 Ribosomal protein L16chromosome CDS2355683 420 - 0.435714
NA Cag_1830 Peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS2348495 783 - 0.42401
NA Cag_1458 Ribosomal protein S15chromosome CDS1924111 321 - 0.398754
NA Cag_0356 Ribosomal protein L7/L12chromosome CDS402312 375 + 0.429333
NA Cag_1842 30S ribosomal protein S17chromosome CDS2355127 270 - 0.407407
NA Cag_1838 30S ribosomal protein S14chromosome CDS2353423 270 - 0.433333
NA Cag_0388 Valyl-tRNA synthetase, class Iachromosome CDS449392 2709 - 0.490956
NA Cag_1827 30S ribosomal protein S13chromosome CDS2347586 378 - 0.431217
NA Cag_0932 Aspartyl-tRNA synthetasechromosome CDS1266950 1818 - 0.460946
NA Cag_1648 Ribosomal protein S2chromosome CDS2145896 732 - 0.445355
NA Cag_1853 Translation elongation factor Tuchromosome CDS2360547 1182 - 0.445854
NA Cag_0711 Prolyl-tRNA synthetase, archael and euk typechromosome CDS984745 1446 + 0.466805
NA Cag_1688 Leucyl-tRNA synthetase class Iachromosome CDS2190422 2418 - 0.486352
NA Cag_1565 Sua5/YciO/YrdC/YwlCchromosome CDS2051896 975 + 0.509744
NA Cag_1326 release factors family proteinchromosome CDS1792412 414 + 0.483092
NA Cag_2032 ribonuclease P protein component, putativechromosome CDS2571199 258 - 0.434109
NA Cag_0801 Ribosomal protein L19chromosome CDS1125677 363 - 0.454545
NA Cag_1467 Histidyl-tRNA synthetase, class IIachromosome CDS1932884 1278 - 0.482786
NA Cag_0094 Ribosomal protein S6chromosome CDS109940 399 + 0.423559
NA Cag_1632 Ribosomal protein S21chromosome CDS2131184 198 - 0.439394
NA Cag_1394 tRNA isopentenyltransferasechromosome CDS1856960 936 + 0.495726
NA Cag_1110 Ribosomal protein L33chromosome CDS1498535 183 + 0.382514
NA Cag_0946 Peptide chain release factor 3chromosome CDS1281788 1593 + 0.456372
NA Cag_0354 Ribosomal protein L1chromosome CDS401018 690 + 0.424638
NA Cag_0803 16S rRNA processing protein RimMchromosome CDS1126793 504 - 0.388889
NA Cag_1829 Translation initiation factor IF-1chromosome CDS2348223 219 - 0.369863
NA Cag_1193 16S rRNA dimethylasechromosome CDS1586589 792 + 0.453283
NA Cag_1836 50S ribosomal protein L6chromosome CDS2352399 540 - 0.425926
NA Cag_0072 Tryptophanyl-tRNA synthetase, class Ibchromosome CDS79762 1065 - 0.488263
NA Cag_2028 23S rRNA methyltransferase/RumAchromosome CDS2566954 1434 - 0.474198
NA Cag_1534 conserved hypothetical proteinchromosome CDS2009481 702 + 0.428775
NA Cag_1854 Translation elongation factor Gchromosome CDS2361788 2115 - 0.420804
NA Cag_1647 Elongation factor Tschromosome CDS2144916 867 - 0.45098
NA Cag_1841 Ribosomal protein L14chromosome CDS2354719 369 - 0.417344
NA Cag_1462 Initiation factor 2chromosome CDS1926690 3069 - 0.474422
NA Cag_1835 Ribosomal protein L18chromosome CDS2351986 360 - 0.411111
NA Cag_0193 mannose-1-phosphate guanylyltransferase, putativechromosome CDS219931 948 + 0.488397
NA Cag_0712 Queuine tRNA-ribosyltransferasechromosome CDS986327 1134 + 0.496473
NA Cag_2021 ribosomal protein L11 methyltransferase, putativechromosome CDS2560587 867 - 0.463668
NA Cag_1622 Pseudouridine synthase, RluDchromosome CDS2121088 1092 + 0.47619
NA Cag_0355 50S ribosomal protein L10chromosome CDS401726 519 + 0.414258
NA Cag_0488 Formylmethionine deformylasechromosome CDS569511 600 - 0.465
NA Cag_1714 Initiation factor 3chromosome CDS2226496 681 - 0.461087
NA Cag_0254 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS284409 1080 - 0.508333
NA Cag_0361 Elongation factor Pchromosome CDS413551 567 - 0.416226
NA Cag_0572 conserved hypothetical proteinchromosome CDS678292 1092 + 0.450549
NA Cag_1849 50S ribosomal protein L23chromosome CDS2358513 312 - 0.410256
NA Cag_1461 Ribosome-binding factor Achromosome CDS1926296 372 - 0.462366
NA Cag_0695 Seryl-tRNA synthetase, class IIachromosome CDS967300 1281 + 0.481655
NA Cag_1176 Lysyl-tRNA synthetase, class-2chromosome CDS1570430 1536 + 0.414714
NA Cag_1425 Modification methylase HemKchromosome CDS1894509 894 - 0.519016
NA Cag_0863 Ribosomal protein L27chromosome CDS1196731 258 - 0.449612
NA Cag_1231 conserved hypothetical proteinchromosome CDS1633438 273 - 0.410256