Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
Number of genes found: 189
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| Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | t1632 | putative pseudouridine synthase | RecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; | chromosome | CDS | 1691279 | 876 | - | 0.567352 |
| NA | t3198 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3287491 | 1941 | - | 0.573931 |
| NA | t3413 | possible lipoprotein | SubName: Full=Possible lipoprotein; | chromosome | CDS | 3509408 | 807 | - | 0.428748 |
| NA | t0479 | conserved hypothetical protein | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 553098 | 933 | + | 0.530547 |
| NA | t0564 | putative lipopolysaccharide modification protein | RecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; | chromosome | CDS | 639046 | 1983 | - | 0.540091 |
| NA | t0311 | putative RNA methyltransferase | RecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; | chromosome | CDS | 356421 | 732 | + | 0.571038 |
| NA | t1092 | putative ATP/GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 1176621 | 1092 | - | 0.527473 |
| NA | t0739 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 819259 | 885 | - | 0.500565 |
| NA | t3932 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 4070233 | 381 | - | 0.435696 |
| NA | t4158 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4302075 | 339 | - | 0.572271 |
| NA | t1619 | putative translation initiaiton factor | RecName: Full=Uncharacterized protein YciH; | chromosome | CDS | 1675736 | 327 | - | 0.461774 |
| NA | t4599 | conserved hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; | chromosome | CDS | 4750627 | 1029 | - | 0.5724 |
| NA | t0081 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome | CDS | 93416 | 231 | + | 0.484848 |
| NA | t4289 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4455212 | 360 | + | 0.469444 |
| NA | t3215 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3307460 | 333 | + | 0.471471 |
| NA | t1633 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1692255 | 621 | - | 0.52657 |
| NA | t1467 | putative isomerase | SubName: Full=Putative isomerase; | chromosome | CDS | 1511427 | 1080 | + | 0.386111 |
| NA | t3238 | probable sigma(54) modulation protein | SubName: Full=Probable sigma(54) modulation protein; | chromosome | CDS | 3325887 | 288 | + | 0.461806 |
| NA | t4269 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4434572 | 420 | + | 0.497619 |
| NA | t2424 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2497128 | 285 | - | 0.410526 |
| NA | t1055 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1138628 | 345 | - | 0.510145 |
| alaS | t2728 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 2810127 | 2631 | - | 0.551121 |
| ansA | t1173 | L-Asparaginase I | SubName: Full=L-Asparaginase I; EC=3.5.1.1; | chromosome | CDS | 1239676 | 1017 | - | 0.526057 |
| ansB | t3018 | L-asparaginase | SubName: Full=L-asparaginase; EC=3.5.1.1; | chromosome | CDS | 3106660 | 1047 | - | 0.527221 |
| argS | t0968 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 1057191 | 1734 | - | 0.551326 |
| asnS | t1934 | asparaginyl-tRNA synthetase | RecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; | chromosome | CDS | 1977682 | 1401 | + | 0.551035 |
| aspS | t0976 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; | chromosome | CDS | 1064639 | 1773 | + | 0.564016 |
| cca | t3124 | tRNA nucleotidyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 3212217 | 1242 | + | 0.589372 |
| cysS | t2324 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 2387374 | 1386 | - | 0.549062 |
| efp | t4386 | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 4539006 | 567 | + | 0.514991 |
| fms | t4098 | polypeptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 4236705 | 510 | - | 0.515686 |
| fmt | t4097 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4235742 | 948 | - | 0.547468 |
| frr | t0220 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 254023 | 558 | + | 0.510753 |
| ftsJ | t3214 | cell division protein | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 3306746 | 627 | - | 0.515152 |
| fusA | t4059 | elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 4212478 | 2115 | + | 0.51773 |
| glnS | t2189 | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 2256003 | 1668 | - | 0.53717 |
| gltX | t0442 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 512524 | 1416 | + | 0.55226 |
| glyQ | t3863 | glycine-tRNA synthetase, alpha subunit | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 3990831 | 912 | + | 0.552632 |
| glyS | t3864 | glycine-tRNA synthetase, beta subunit | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 3991752 | 2070 | + | 0.552657 |
| gshB | t3007 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 3098120 | 948 | + | 0.541139 |
| hemK | t1101 | HemK protein | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 1186199 | 834 | + | 0.58753 |
| hisS | t0334 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 384454 | 1275 | + | 0.559216 |
| hslR | t4009 | heat shock protein | RecName: Full=Heat shock protein 15; | chromosome | CDS | 4161778 | 402 | - | 0.567164 |
| ileS | t0048 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 53852 | 2835 | + | 0.548501 |
| infA | t1980 | initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 2039975 | 219 | + | 0.488584 |
| infB | t3204 | protein chain initiation factor 2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 3294916 | 2679 | - | 0.553565 |
| infC | t1214 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 1282577 | 543 | + | 0.475138 |
| ksgA | t0093 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 102458 | 822 | - | 0.526764 |
| lasT | t4639 | putative RNA methyltransferase | SubName: Full=Putative RNA methyltransferase; | chromosome | CDS | 4791251 | 687 | + | 0.534207 |
| leuS | t2219 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 2284615 | 2583 | + | 0.558266 |
| ligT | t0196 | 2'-5' RNA ligase | SubName: Full=2-5 RNA ligase; EC=6.5.1.-; | chromosome | CDS | 222150 | 531 | - | 0.613936 |
| lysS | t2958 | lysyl tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 3047236 | 1518 | - | 0.539526 |
| map | t0216 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 249928 | 795 | - | 0.522013 |
| miaA | t4411 | tRNA delta-2-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 4562793 | 951 | + | 0.540484 |
| miaB | t2203 | MiaB protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 2268374 | 1467 | + | 0.540559 |
| miaE | t4505 | tRNA hydroxylase | SubName: Full=tRNA hydroxylase; | chromosome | CDS | 4652359 | 765 | + | 0.550327 |
| pcnB | t0192 | poly(A) polymerase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 218273 | 1419 | - | 0.562368 |
| pheS | t1218 | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 1284121 | 984 | + | 0.536585 |
| pilK | t4253 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 4421237 | 468 | + | 0.540598 |
| pnp | t3200 | polynucleotide phosphorylase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 3290553 | 2136 | - | 0.56133 |
| prfA | t1100 | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1185117 | 1083 | + | 0.579871 |
| prfB | t2959 | peptide chain release factor 2 | RecName: Full=Peptide chain release factor 2; Short=RF-2; | chromosome | CDS | 3048763 | 1099 | - | 0.539581 |
| prfC | t4603 | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 4753377 | 1590 | + | 0.543396 |
| prfH | t2535 | putative peptide chain release factor | SubName: Full=Putative peptide chain release factor; | chromosome | CDS | 2610992 | 615 | - | 0.556098 |
| prmA | t3298 | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 3392826 | 882 | + | 0.556689 |
| proS | t0245 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 280756 | 1719 | - | 0.543339 |
| pth | t1093 | peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1177829 | 609 | - | 0.520525 |
| queA | t2459 | S-adenosylmethionine:tRNAribosyltransferase-isom erase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 2528271 | 1065 | - | 0.556808 |
| rbfA | t3203 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 3294294 | 402 | - | 0.534826 |
| relE | t4484 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4630646 | 285 | + | 0.470175 |
| rfbF | t0780 | glucose-1-phosphate cytidylyltransferase | RecName: Full=Glucose-1-phosphate cytidylyltransferase; EC=2.7.7.33; AltName: Full=CDP-glucose pyrophosphorylase; | chromosome | CDS | 871817 | 774 | + | 0.435401 |
| rhlB | t3382 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 3482595 | 1266 | + | 0.546604 |
| rhlE | t2068 | putative ATP-dependent RNA helicase rhlE | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 2130325 | 1368 | - | 0.584795 |
| rimJ | t1753 | ribosomal-protein-alanine acetyltransferase | SubName: Full=Ribosomal-protein-alanine acetyltransferase; | chromosome | CDS | 1817818 | 585 | - | 0.512821 |
| rimK | t2021 | ribosomal protein S6 modification protein | RecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Poly-alpha-glutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; | chromosome | CDS | 2079201 | 903 | - | 0.563677 |
| rimL | t1520 | ribosomal-protein-serine acetyltransferase | SubName: Full=Ribosomal-protein-serine acetyltransferase; | chromosome | CDS | 1576530 | 540 | - | 0.511111 |
| rluA | t0098 | ribosomal large subunit pseudouridine synthase A | RecName: Full=Ribosomal large subunit pseudouridine synthase A; EC=5.4.99.28; EC=5.4.99.29; AltName: Full=23S rRNA pseudouridine(746) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; AltName: Full=tRNA pseudouridine(32) synthase; | chromosome | CDS | 109120 | 660 | - | 0.575758 |
| rluB | t1683 | putative ribosomal large subunit pseudouridine synthase B | RecName: Full=Ribosomal large subunit pseudouridine synthase E; EC=5.4.99.20; AltName: Full=rRNA pseudouridylate synthase E; AltName: Full=rRNA-uridine isomerase E; | chromosome | CDS | 1747485 | 666 | + | 0.528529 |
| rluC | t1732 | ribosomal large subunit pseudouridine synthase C | RecName: Full=Ribosomal large subunit pseudouridine synthase C; EC=5.4.99.24; AltName: Full=23S rRNA pseudouridine(955/2504/2580) synthase; AltName: Full=rRNA pseudouridylate synthase C; AltName: Full=rRNA-uridine isomerase C; | chromosome | CDS | 1797105 | 960 | - | 0.544792 |
| rmf | t1854 | ribosome modulation factor | RecName: Full=Ribosome modulation factor; Short=RMF; | chromosome | CDS | 1913967 | 168 | - | 0.541667 |
| rnG | t3285 | ribonuclease G | SubName: Full=Ribonuclease G; EC=3.1.4.-; | chromosome | CDS | 3378943 | 1470 | - | 0.529252 |
| rna | t2250 | ribonuclease I precursor | SubName: Full=Ribonuclease I; | chromosome | CDS | 2315477 | 807 | + | 0.551425 |
| rnd | t1060 | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 1144382 | 1128 | + | 0.549645 |
| rne | t1734 | ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 1798638 | 3204 | + | 0.581461 |
| rnpA | t3679 | ribonuclease P | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 3789441 | 360 | - | 0.558333 |
| rph | t3784 | ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 3906401 | 717 | + | 0.546722 |
| rplA | t3477 | 50S ribosomal subunit protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 3572627 | 705 | - | 0.533333 |
| rplB | t4068 | 50S ribosomal subunit protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 4219526 | 822 | + | 0.532847 |
| rplC | t4065 | 50S ribosomal subunit protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 4217964 | 630 | + | 0.515873 |
| rplD | t4066 | 50S ribosomal subunit protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 4218604 | 606 | + | 0.533003 |
| rplE | t4077 | 50S ribosomal subunit protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 4223451 | 540 | + | 0.494444 |
| rplF | t4080 | 50S ribosomal subunit protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 4224749 | 534 | + | 0.516854 |
| rplI | t4445 | 50S ribosomal subunit protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 4589950 | 450 | + | 0.508889 |
| rplJ | t3476 | 50S ribosomal subunit protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 3571714 | 498 | - | 0.52008 |
| rplK | t3478 | 50S ribosomal subunit protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 3573335 | 429 | - | 0.524476 |
| rplL | t3475 | 50S ribosomal subunit protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; AltName: Full=L8; | chromosome | CDS | 3571282 | 366 | - | 0.461749 |
| rplM | t3261 | 50S ribosomal subunit protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 3351919 | 429 | - | 0.512821 |
| rplN | t4075 | 50S ribosomal subunit protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 4222740 | 372 | + | 0.5 |
| rplO | t4084 | 50S ribosomal subunit protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 4226350 | 435 | + | 0.544828 |
| rplP | t4072 | 50S ribosomal subunit protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 4221721 | 411 | + | 0.523114 |
| rplQ | t4091 | 50S ribosomal subunit protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 4230890 | 384 | + | 0.544271 |
| rplR | t4081 | 50S ribosomal subunit protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 4225292 | 354 | + | 0.528249 |
| rplS | t2628 | 50S ribosomal subunit protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 2705977 | 348 | - | 0.482759 |
| rplT | t1216 | 50S ribosomal subunit protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 1283463 | 357 | + | 0.498599 |
| rplU | t3221 | 50S ribosomal subunit protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 3312796 | 312 | - | 0.490385 |
| rplV | t4070 | 50S ribosomal subunit protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 4220657 | 333 | + | 0.501502 |
| rplW | t4067 | 50S ribosomal subunit protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 4219206 | 303 | + | 0.491749 |
| rplX | t4076 | 50S ribosomal subunit protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 4223122 | 315 | + | 0.457143 |
| rplY | t0630 | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; | chromosome | CDS | 711610 | 285 | - | 0.512281 |
| rpmA | t3220 | 50S ribosomal subunit protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 3312519 | 258 | - | 0.496124 |
| rpmB | t3790 | 50S ribosomal subunit protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 3911334 | 237 | + | 0.518987 |
| rpmC | t4073 | 50S ribosomal subunit protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 4222131 | 192 | + | 0.53125 |
| rpmD | t4083 | 50S ribosomal subunit protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 4226167 | 180 | + | 0.511111 |
| rpmE | t3522 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 3625098 | 213 | - | 0.488263 |
| rpmE | t2391 | putative 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 2461628 | 261 | - | 0.43295 |
| rpmF | t1729 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1795494 | 174 | - | 0.528736 |
| rpmG | t3791 | 50S ribosomal subunit protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 3911591 | 168 | + | 0.404762 |
| rpmH | t3680 | 50S ribosomal protein l34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 3789817 | 141 | - | 0.524823 |
| rpmI | t1215 | 50S ribosomal subunit protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 1283215 | 198 | + | 0.484848 |
| rpmJ | t4086 | 50S ribosomal subunit protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 4228155 | 117 | + | 0.478632 |
| rpmJ | t2390 | putative 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36 2; | chromosome | CDS | 2461482 | 141 | - | 0.432624 |
| rpsA | t1953 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2003102 | 1674 | - | 0.510753 |
| rpsB | t0217 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 251172 | 726 | + | 0.511019 |
| rpsC | t4071 | 30S ribosomal subunit protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 4221007 | 702 | + | 0.511396 |
| rpsD | t4089 | 30S ribosomal subunit protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 4229214 | 621 | + | 0.513688 |
| rpsE | t4082 | 30S ribosomal subunit protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 4225660 | 504 | + | 0.505952 |
| rpsF | t4442 | 30s ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 4588960 | 396 | + | 0.527778 |
| rpsG | t4058 | 30S ribosomal subunit protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 4211911 | 471 | + | 0.498938 |
| rpsH | t4079 | 30S ribosomal subunit protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 4224344 | 393 | + | 0.501272 |
| rpsI | t3260 | 30S ribosomal subunit protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 3351511 | 393 | - | 0.531807 |
| rpsJ | t4064 | 30S ribosomal subunit protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 4217620 | 312 | + | 0.544872 |
| rpsK | t4088 | 30S ribosomal subunit protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 4228791 | 390 | + | 0.512821 |
| rpsL | t4057 | 30S ribosomal subunit protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 4211441 | 375 | + | 0.528 |
| rpsM | t4087 | 30S ribosomal subunit protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 4228418 | 357 | + | 0.521008 |
| rpsN | t4078 | 30S ribosomal subunit protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 4224005 | 306 | + | 0.522876 |
| rpsO | t3201 | 30S ribosomal subunit protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 3292930 | 270 | - | 0.5 |
| rpsP | t2631 | 30S ribosomal subunit protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 2707744 | 249 | - | 0.522088 |
| rpsQ | t4074 | 30S ribosomal subunit protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 4222322 | 255 | + | 0.478431 |
| rpsR | t4444 | 30s ribosomal subunit protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 4589681 | 228 | + | 0.52193 |
| rpsS | t4069 | 30S ribosomal subunit protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 4220364 | 279 | + | 0.491039 |
| rpsT | t0045 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 52277 | 264 | - | 0.465909 |
| rpsU | t3129 | 30S ribosomal subunit protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 3217050 | 216 | + | 0.518519 |
| selB | t3837 | selenocysteine-specific elongation factor | SubName: Full=Selenocysteine-specific elongation factor; | chromosome | CDS | 3960899 | 1851 | + | 0.568882 |
| serS | t1971 | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 2025477 | 1293 | - | 0.53983 |
| sfhB | t2618 | ftsH suppressor protein SfhB | RecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; | chromosome | CDS | 2696651 | 981 | - | 0.534149 |
| smpA | t2639 | small protein A | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 2716208 | 339 | + | 0.516224 |
| speG | t1423 | spermidine N1-acetyltransferase | SubName: Full=Spermidine N1-acetyltransferase; | chromosome | CDS | 1469143 | 561 | - | 0.477718 |
| srmB | t0267 | ATP-dependent RNA helicase SrmB | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 305010 | 1335 | - | 0.548315 |
| sun | t4096 | sun protein | RecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; | chromosome | CDS | 4234401 | 1290 | - | 0.542636 |
| tgt | t2458 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 2526947 | 1128 | - | 0.525709 |
| thrS | t1213 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 1280645 | 1929 | + | 0.50337 |
| trmA | t3496 | tRNA (uracil-5)-methyltransferase | RecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; | chromosome | CDS | 3589125 | 1101 | + | 0.520436 |
| trmD | t2629 | tRNA (guanine-N1) methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 2706365 | 768 | - | 0.540365 |
| trmH | t3775 | tRNA (guanosine-2'-O)-methyltransferase | SubName: Full=tRNA (Guanosine-2-O)-methyltransferase; EC=2.1.1.34; | chromosome | CDS | 3896922 | 690 | - | 0.547826 |
| trmU | t1686 | tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 1749003 | 1107 | + | 0.542005 |
| trpS | t4557 | probable tryptophanyl-tRNA synthetase | SubName: Full=Probable tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 4708764 | 1014 | - | 0.523669 |
| trpS | t4024 | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; | chromosome | CDS | 4177991 | 1005 | + | 0.517413 |
| truA | t0496 | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 568418 | 813 | + | 0.558426 |
| truB | t3202 | tRNA pseudouridine 55 synthase | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 3293350 | 945 | - | 0.557672 |
| tsf | t0218 | elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 252155 | 852 | + | 0.529343 |
| tufA | t4060 | elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 4214664 | 1185 | + | 0.53924 |
| tufB | t3481 | elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 3575081 | 1185 | - | 0.537553 |
| tyrS | t1317 | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 1377893 | 1275 | + | 0.527843 |
| valS | t4510 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 4655990 | 2856 | - | 0.566176 |
| yadB | t0193 | glutamyl-tRNA synthetase-related protein | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 219832 | 897 | - | 0.578595 |
| yaeJ | t0242 | putative release factor | SubName: Full=Putative release factor; | chromosome | CDS | 278816 | 423 | + | 0.553191 |
| ybfE | t2180 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2246983 | 294 | + | 0.527211 |
| ybjF | t2014 | hypothetical RNA methyltransferase | RecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; | chromosome | CDS | 2072424 | 1128 | - | 0.562057 |
| yeiP | t0644 | hypothetical protein | RecName: Full=Elongation factor P-like protein; | chromosome | CDS | 727031 | 573 | - | 0.511344 |
| yejD | t0632 | ribosomal small subunit pseudouridine synthase | RecName: Full=Ribosomal small subunit pseudouridine synthase A; EC=5.4.99.19; AltName: Full=16S pseudouridylate 516 synthase; AltName: Full=16S rRNA pseudouridine(516) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; | chromosome | CDS | 713931 | 696 | + | 0.54454 |
| yfhC | t0289 | conserved hypothetical protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 326219 | 552 | + | 0.565217 |
| yfiA | t2620 | putative sigma-54 modulation protein | SubName: Full=Putative sigma(54) modulation protein; SubName: Full=Putative sigma-54 modulation protein; | chromosome | CDS | 2698772 | 339 | + | 0.471976 |
| yfiF | t0262 | putative RNA methyltransferase | SubName: Full=Putative RNA methyltransferase; | chromosome | CDS | 300799 | 1038 | + | 0.570328 |
| yfjA | t2630 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 2707177 | 549 | - | 0.499089 |
| ygcA | t2866 | putative RNA methyltransferase | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 2946600 | 1296 | - | 0.542438 |
| ygjO | t3140 | conserved hypothetical protein | RecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; | chromosome | CDS | 3231351 | 1137 | - | 0.532982 |
| yhdG | t3299 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; | chromosome | CDS | 3394487 | 846 | + | 0.536643 |
| yhjN | t3899 | putative polysaccharide biosynthesis protein subunit B | RecName: Full=Cyclic di-GMP-binding protein; AltName: Full=Cellulose synthase regulatory subunit; Flags: Precursor; | chromosome | CDS | 4027231 | 2301 | + | 0.569318 |
| yibK | t3824 | putative RNA methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 3944571 | 474 | - | 0.563291 |
| yihZ | t3593 | conserved hypothetical protein | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 3692343 | 438 | - | 0.554795 |
| yjbC | t4120 | putative pseudouridine synthase | RecName: Full=Ribosomal large subunit pseudouridine synthase F; EC=5.4.99.-; AltName: Full=23S rRNA pseudouridine(2604) synthase; AltName: Full=rRNA pseudouridylate synthase F; AltName: Full=rRNA-uridine isomerase F; | chromosome | CDS | 4262523 | 870 | + | 0.510345 |
| yjbN | t4149 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase A; EC=1.-.-.-; | chromosome | CDS | 4293734 | 999 | + | 0.546547 |
| yjeA | t4396 | lysyl-tRNA synthetase | RecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; | chromosome | CDS | 4545490 | 978 | + | 0.541922 |
| yjfH | t4420 | probable tRNA/rRNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 4572858 | 732 | + | 0.572404 |
| yjgF | t4493 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4642000 | 387 | - | 0.547804 |
| yliG | t2037 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 2093889 | 1326 | + | 0.539216 |
| yohI | t0681 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase C; EC=1.-.-.-; | chromosome | CDS | 766692 | 939 | + | 0.574015 |
| yqcB | t2873 | putative RNA pseudouridylate synthase | RecName: Full=tRNA pseudouridine synthase C; EC=5.4.99.26; AltName: Full=tRNA pseudouridine(65) synthase; AltName: Full=tRNA pseudouridylate synthase C; AltName: Full=tRNA-uridine isomerase C; | chromosome | CDS | 2956978 | 783 | - | 0.582375 |
| yrdC | t4102 | conserved hypothetical protein | RecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; | chromosome | CDS | 4239489 | 573 | + | 0.541012 |
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