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2024-05-05 04:29:51

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2

Number of genes found: 189

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Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t4599 conserved hypothetical proteinchromosome CDS4750627 1029 - 0.5724
NA t1092 putative ATP/GTP-binding proteinchromosome CDS1176621 1092 - 0.527473
NA t0564 putative lipopolysaccharide modification proteinchromosome CDS639046 1983 - 0.540091
NA t3198 ATP-dependent RNA helicasechromosome CDS3287491 1941 - 0.573931
NA t3413 possible lipoproteinchromosome CDS3509408 807 - 0.428748
NA t4158 hypothetical proteinchromosome CDS4302075 339 - 0.572271
NA t3932 putative regulatory proteinchromosome CDS4070233 381 - 0.435696
NA t0311 putative RNA methyltransferasechromosome CDS356421 732 + 0.571038
NA t1633 conserved hypothetical proteinchromosome CDS1692255 621 - 0.52657
NA t2424 hypothetical proteinchromosome CDS2497128 285 - 0.410526
NA t3215 conserved hypothetical proteinchromosome CDS3307460 333 + 0.471471
NA t3238 probable sigma(54) modulation proteinchromosome CDS3325887 288 + 0.461806
NA t1632 putative pseudouridine synthasechromosome CDS1691279 876 - 0.567352
NA t0479 conserved hypothetical proteinchromosome CDS553098 933 + 0.530547
NA t1467 putative isomerasechromosome CDS1511427 1080 + 0.386111
NA t0081 putative lipoproteinchromosome CDS93416 231 + 0.484848
NA t1619 putative translation initiaiton factorchromosome CDS1675736 327 - 0.461774
NA t4269 hypothetical proteinchromosome CDS4434572 420 + 0.497619
NA t4289 conserved hypothetical proteinchromosome CDS4455212 360 + 0.469444
NA t1055 conserved hypothetical proteinchromosome CDS1138628 345 - 0.510145
NA t0739 hypothetical proteinchromosome CDS819259 885 - 0.500565
alaS t2728 alanyl-tRNA synthetasechromosome CDS2810127 2631 - 0.551121
ansA t1173 L-Asparaginase Ichromosome CDS1239676 1017 - 0.526057
ansB t3018 L-asparaginasechromosome CDS3106660 1047 - 0.527221
argS t0968 arginyl-tRNA synthetasechromosome CDS1057191 1734 - 0.551326
asnS t1934 asparaginyl-tRNA synthetasechromosome CDS1977682 1401 + 0.551035
aspS t0976 aspartyl-tRNA synthetasechromosome CDS1064639 1773 + 0.564016
cca t3124 tRNA nucleotidyltransferasechromosome CDS3212217 1242 + 0.589372
cysS t2324 cysteinyl-tRNA synthetasechromosome CDS2387374 1386 - 0.549062
efp t4386 elongation factor Pchromosome CDS4539006 567 + 0.514991
fms t4098 polypeptide deformylasechromosome CDS4236705 510 - 0.515686
fmt t4097 methionyl-tRNA formyltransferasechromosome CDS4235742 948 - 0.547468
frr t0220 ribosome recycling factorchromosome CDS254023 558 + 0.510753
ftsJ t3214 cell division proteinchromosome CDS3306746 627 - 0.515152
fusA t4059 elongation factor Gchromosome CDS4212478 2115 + 0.51773
glnS t2189 glutaminyl-tRNA synthetasechromosome CDS2256003 1668 - 0.53717
gltX t0442 glutamyl-tRNA synthetasechromosome CDS512524 1416 + 0.55226
glyQ t3863 glycine-tRNA synthetase, alpha subunitchromosome CDS3990831 912 + 0.552632
glyS t3864 glycine-tRNA synthetase, beta subunitchromosome CDS3991752 2070 + 0.552657
gshB t3007 glutathione synthetasechromosome CDS3098120 948 + 0.541139
hemK t1101 HemK proteinchromosome CDS1186199 834 + 0.58753
hisS t0334 histidyl-tRNA synthetasechromosome CDS384454 1275 + 0.559216
hslR t4009 heat shock proteinchromosome CDS4161778 402 - 0.567164
ileS t0048 isoleucyl-tRNA synthetasechromosome CDS53852 2835 + 0.548501
infA t1980 initiation factor IF-1chromosome CDS2039975 219 + 0.488584
infB t3204 protein chain initiation factor 2chromosome CDS3294916 2679 - 0.553565
infC t1214 translation initiation factor IF-3chromosome CDS1282577 543 + 0.475138
ksgA t0093 dimethyladenosine transferasechromosome CDS102458 822 - 0.526764
lasT t4639 putative RNA methyltransferasechromosome CDS4791251 687 + 0.534207
leuS t2219 leucyl-tRNA synthetasechromosome CDS2284615 2583 + 0.558266
ligT t0196 2'-5' RNA ligasechromosome CDS222150 531 - 0.613936
lysS t2958 lysyl tRNA synthetasechromosome CDS3047236 1518 - 0.539526
map t0216 methionine aminopeptidasechromosome CDS249928 795 - 0.522013
miaA t4411 tRNA delta-2-isopentenylpyrophosphate transferasechromosome CDS4562793 951 + 0.540484
miaB t2203 MiaB proteinchromosome CDS2268374 1467 + 0.540559
miaE t4505 tRNA hydroxylasechromosome CDS4652359 765 + 0.550327
pcnB t0192 poly(A) polymerasechromosome CDS218273 1419 - 0.562368
pheS t1218 phenylalanyl-tRNA synthetase alpha chainchromosome CDS1284121 984 + 0.536585
pilK t4253 putative exported proteinchromosome CDS4421237 468 + 0.540598
pnp t3200 polynucleotide phosphorylasechromosome CDS3290553 2136 - 0.56133
prfA t1100 peptide chain release factor 1chromosome CDS1185117 1083 + 0.579871
prfB t2959 peptide chain release factor 2chromosome CDS3048763 1099 - 0.539581
prfC t4603 peptide chain release factor 3chromosome CDS4753377 1590 + 0.543396
prfH t2535 putative peptide chain release factorchromosome CDS2610992 615 - 0.556098
prmA t3298 ribosomal protein L11 methyltransferasechromosome CDS3392826 882 + 0.556689
proS t0245 prolyl-tRNA synthetasechromosome CDS280756 1719 - 0.543339
pth t1093 peptidyl-tRNA hydrolasechromosome CDS1177829 609 - 0.520525
queA t2459 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS2528271 1065 - 0.556808
rbfA t3203 ribosome-binding factor Achromosome CDS3294294 402 - 0.534826
relE t4484 conserved hypothetical proteinchromosome CDS4630646 285 + 0.470175
rfbF t0780 glucose-1-phosphate cytidylyltransferasechromosome CDS871817 774 + 0.435401
rhlB t3382 putative ATP-dependent RNA helicasechromosome CDS3482595 1266 + 0.546604
rhlE t2068 putative ATP-dependent RNA helicase rhlEchromosome CDS2130325 1368 - 0.584795
rimJ t1753 ribosomal-protein-alanine acetyltransferasechromosome CDS1817818 585 - 0.512821
rimK t2021 ribosomal protein S6 modification proteinchromosome CDS2079201 903 - 0.563677
rimL t1520 ribosomal-protein-serine acetyltransferasechromosome CDS1576530 540 - 0.511111
rluA t0098 ribosomal large subunit pseudouridine synthase Achromosome CDS109120 660 - 0.575758
rluB t1683 putative ribosomal large subunit pseudouridine synthase Bchromosome CDS1747485 666 + 0.528529
rluC t1732 ribosomal large subunit pseudouridine synthase Cchromosome CDS1797105 960 - 0.544792
rmf t1854 ribosome modulation factorchromosome CDS1913967 168 - 0.541667
rnG t3285 ribonuclease Gchromosome CDS3378943 1470 - 0.529252
rna t2250 ribonuclease I precursorchromosome CDS2315477 807 + 0.551425
rnd t1060 ribonuclease Dchromosome CDS1144382 1128 + 0.549645
rne t1734 ribonuclease Echromosome CDS1798638 3204 + 0.581461
rnpA t3679 ribonuclease Pchromosome CDS3789441 360 - 0.558333
rph t3784 ribonuclease PHchromosome CDS3906401 717 + 0.546722
rplA t3477 50S ribosomal subunit protein L1chromosome CDS3572627 705 - 0.533333
rplB t4068 50S ribosomal subunit protein L2chromosome CDS4219526 822 + 0.532847
rplC t4065 50S ribosomal subunit protein L3chromosome CDS4217964 630 + 0.515873
rplD t4066 50S ribosomal subunit protein L4chromosome CDS4218604 606 + 0.533003
rplE t4077 50S ribosomal subunit protein L5chromosome CDS4223451 540 + 0.494444
rplF t4080 50S ribosomal subunit protein L6chromosome CDS4224749 534 + 0.516854
rplI t4445 50S ribosomal subunit protein L9chromosome CDS4589950 450 + 0.508889
rplJ t3476 50S ribosomal subunit protein L10chromosome CDS3571714 498 - 0.52008
rplK t3478 50S ribosomal subunit protein L11chromosome CDS3573335 429 - 0.524476
rplL t3475 50S ribosomal subunit protein L7/L12chromosome CDS3571282 366 - 0.461749
rplM t3261 50S ribosomal subunit protein L13chromosome CDS3351919 429 - 0.512821
rplN t4075 50S ribosomal subunit protein L14chromosome CDS4222740 372 + 0.5
rplO t4084 50S ribosomal subunit protein L15chromosome CDS4226350 435 + 0.544828
rplP t4072 50S ribosomal subunit protein L16chromosome CDS4221721 411 + 0.523114
rplQ t4091 50S ribosomal subunit protein L17chromosome CDS4230890 384 + 0.544271
rplR t4081 50S ribosomal subunit protein L18chromosome CDS4225292 354 + 0.528249
rplS t2628 50S ribosomal subunit protein L19chromosome CDS2705977 348 - 0.482759
rplT t1216 50S ribosomal subunit protein L20chromosome CDS1283463 357 + 0.498599
rplU t3221 50S ribosomal subunit protein L21chromosome CDS3312796 312 - 0.490385
rplV t4070 50S ribosomal subunit protein L22chromosome CDS4220657 333 + 0.501502
rplW t4067 50S ribosomal subunit protein L23chromosome CDS4219206 303 + 0.491749
rplX t4076 50S ribosomal subunit protein L24chromosome CDS4223122 315 + 0.457143
rplY t0630 50S ribosomal protein L25chromosome CDS711610 285 - 0.512281
rpmA t3220 50S ribosomal subunit protein L27chromosome CDS3312519 258 - 0.496124
rpmB t3790 50S ribosomal subunit protein L28chromosome CDS3911334 237 + 0.518987
rpmC t4073 50S ribosomal subunit protein L29chromosome CDS4222131 192 + 0.53125
rpmD t4083 50S ribosomal subunit protein L30chromosome CDS4226167 180 + 0.511111
rpmE t2391 putative 50S ribosomal protein L31chromosome CDS2461628 261 - 0.43295
rpmE t3522 50S ribosomal protein L31chromosome CDS3625098 213 - 0.488263
rpmF t1729 50S ribosomal protein L32chromosome CDS1795494 174 - 0.528736
rpmG t3791 50S ribosomal subunit protein L33chromosome CDS3911591 168 + 0.404762
rpmH t3680 50S ribosomal protein l34chromosome CDS3789817 141 - 0.524823
rpmI t1215 50S ribosomal subunit protein L35chromosome CDS1283215 198 + 0.484848
rpmJ t4086 50S ribosomal subunit protein L36chromosome CDS4228155 117 + 0.478632
rpmJ t2390 putative 50S ribosomal protein L36chromosome CDS2461482 141 - 0.432624
rpsA t1953 30S ribosomal protein S1chromosome CDS2003102 1674 - 0.510753
rpsB t0217 30S ribosomal protein S2chromosome CDS251172 726 + 0.511019
rpsC t4071 30S ribosomal subunit protein S3chromosome CDS4221007 702 + 0.511396
rpsD t4089 30S ribosomal subunit protein S4chromosome CDS4229214 621 + 0.513688
rpsE t4082 30S ribosomal subunit protein S5chromosome CDS4225660 504 + 0.505952
rpsF t4442 30s ribosomal protein S6chromosome CDS4588960 396 + 0.527778
rpsG t4058 30S ribosomal subunit protein S7chromosome CDS4211911 471 + 0.498938
rpsH t4079 30S ribosomal subunit protein S8chromosome CDS4224344 393 + 0.501272
rpsI t3260 30S ribosomal subunit protein S9chromosome CDS3351511 393 - 0.531807
rpsJ t4064 30S ribosomal subunit protein S10chromosome CDS4217620 312 + 0.544872
rpsK t4088 30S ribosomal subunit protein S11chromosome CDS4228791 390 + 0.512821
rpsL t4057 30S ribosomal subunit protein S12chromosome CDS4211441 375 + 0.528
rpsM t4087 30S ribosomal subunit protein S13chromosome CDS4228418 357 + 0.521008
rpsN t4078 30S ribosomal subunit protein S14chromosome CDS4224005 306 + 0.522876
rpsO t3201 30S ribosomal subunit protein S15chromosome CDS3292930 270 - 0.5
rpsP t2631 30S ribosomal subunit protein S16chromosome CDS2707744 249 - 0.522088
rpsQ t4074 30S ribosomal subunit protein S17chromosome CDS4222322 255 + 0.478431
rpsR t4444 30s ribosomal subunit protein S18chromosome CDS4589681 228 + 0.52193
rpsS t4069 30S ribosomal subunit protein S19chromosome CDS4220364 279 + 0.491039
rpsT t0045 30S ribosomal protein S20chromosome CDS52277 264 - 0.465909
rpsU t3129 30S ribosomal subunit protein S21chromosome CDS3217050 216 + 0.518519
selB t3837 selenocysteine-specific elongation factorchromosome CDS3960899 1851 + 0.568882
serS t1971 seryl-tRNA synthetasechromosome CDS2025477 1293 - 0.53983
sfhB t2618 ftsH suppressor protein SfhBchromosome CDS2696651 981 - 0.534149
smpA t2639 small protein Achromosome CDS2716208 339 + 0.516224
speG t1423 spermidine N1-acetyltransferasechromosome CDS1469143 561 - 0.477718
srmB t0267 ATP-dependent RNA helicase SrmBchromosome CDS305010 1335 - 0.548315
sun t4096 sun proteinchromosome CDS4234401 1290 - 0.542636
tgt t2458 queuine tRNA-ribosyltransferasechromosome CDS2526947 1128 - 0.525709
thrS t1213 threonyl-tRNA synthetasechromosome CDS1280645 1929 + 0.50337
trmA t3496 tRNA (uracil-5)-methyltransferasechromosome CDS3589125 1101 + 0.520436
trmD t2629 tRNA (guanine-N1) methyltransferasechromosome CDS2706365 768 - 0.540365
trmH t3775 tRNA (guanosine-2'-O)-methyltransferasechromosome CDS3896922 690 - 0.547826
trmU t1686 tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferasechromosome CDS1749003 1107 + 0.542005
trpS t4557 probable tryptophanyl-tRNA synthetasechromosome CDS4708764 1014 - 0.523669
trpS t4024 tryptophanyl-tRNA synthetasechromosome CDS4177991 1005 + 0.517413
truA t0496 tRNA pseudouridine synthase Achromosome CDS568418 813 + 0.558426
truB t3202 tRNA pseudouridine 55 synthasechromosome CDS3293350 945 - 0.557672
tsf t0218 elongation factor Tschromosome CDS252155 852 + 0.529343
tufA t4060 elongation factor Tuchromosome CDS4214664 1185 + 0.53924
tufB t3481 elongation factor Tuchromosome CDS3575081 1185 - 0.537553
tyrS t1317 tyrosyl-tRNA synthetasechromosome CDS1377893 1275 + 0.527843
valS t4510 valyl-tRNA synthetasechromosome CDS4655990 2856 - 0.566176
yadB t0193 glutamyl-tRNA synthetase-related proteinchromosome CDS219832 897 - 0.578595
yaeJ t0242 putative release factorchromosome CDS278816 423 + 0.553191
ybfE t2180 conserved hypothetical proteinchromosome CDS2246983 294 + 0.527211
ybjF t2014 hypothetical RNA methyltransferasechromosome CDS2072424 1128 - 0.562057
yeiP t0644 hypothetical proteinchromosome CDS727031 573 - 0.511344
yejD t0632 ribosomal small subunit pseudouridine synthasechromosome CDS713931 696 + 0.54454
yfhC t0289 conserved hypothetical proteinchromosome CDS326219 552 + 0.565217
yfiA t2620 putative sigma-54 modulation proteinchromosome CDS2698772 339 + 0.471976
yfiF t0262 putative RNA methyltransferasechromosome CDS300799 1038 + 0.570328
yfjA t2630 16S rRNA processing proteinchromosome CDS2707177 549 - 0.499089
ygcA t2866 putative RNA methyltransferasechromosome CDS2946600 1296 - 0.542438
ygjO t3140 conserved hypothetical proteinchromosome CDS3231351 1137 - 0.532982
yhdG t3299 conserved hypothetical proteinchromosome CDS3394487 846 + 0.536643
yhjN t3899 putative polysaccharide biosynthesis protein subunit Bchromosome CDS4027231 2301 + 0.569318
yibK t3824 putative RNA methyltransferasechromosome CDS3944571 474 - 0.563291
yihZ t3593 conserved hypothetical proteinchromosome CDS3692343 438 - 0.554795
yjbC t4120 putative pseudouridine synthasechromosome CDS4262523 870 + 0.510345
yjbN t4149 conserved hypothetical proteinchromosome CDS4293734 999 + 0.546547
yjeA t4396 lysyl-tRNA synthetasechromosome CDS4545490 978 + 0.541922
yjfH t4420 probable tRNA/rRNA methyltransferasechromosome CDS4572858 732 + 0.572404
yjgF t4493 conserved hypothetical proteinchromosome CDS4642000 387 - 0.547804
yliG t2037 conserved hypothetical proteinchromosome CDS2093889 1326 + 0.539216
yohI t0681 conserved hypothetical proteinchromosome CDS766692 939 + 0.574015
yqcB t2873 putative RNA pseudouridylate synthasechromosome CDS2956978 783 - 0.582375
yrdC t4102 conserved hypothetical proteinchromosome CDS4239489 573 + 0.541012