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2024-04-29 02:09:35

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Pelodictyon luteolum DSM 273, DSM 273

Number of genes found: 133

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pelodictyon luteolum DSM 273, DSM 273
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Plut_1473 Formylmethionine deformylasechromosome CDS1658599 573 - 0.579407
NA Plut_1228 conserved hypothetical proteinchromosome CDS1385039 591 - 0.585448
NA Plut_0587 DEAD/DEAH box helicase-likechromosome CDS686304 1773 + 0.594473
NA Plut_0175 Ribosomal protein S12chromosome CDS183276 390 + 0.548718
NA Plut_1279 Peptide chain release factor 3chromosome CDS1447094 1590 + 0.565409
NA Plut_1688 Pseudouridine synthase, Rsuchromosome CDS1895571 753 - 0.583001
NA Plut_0966 Ribosomal protein S16chromosome CDS1092021 588 + 0.598639
NA Plut_0200 Ribosomal protein L15chromosome CDS196905 555 + 0.547748
NA Plut_0208 Ribosomal protein L17chromosome CDS202653 519 + 0.585742
NA Plut_2131 ribonuclease P protein component, putativechromosome CDS2362285 369 - 0.566396
NA Plut_0075 Peptide chain release factor 1chromosome CDS78868 1077 - 0.616527
NA Plut_2090 Tryptophanyl-tRNA synthetase, class Ibchromosome CDS2322960 1002 + 0.578842
NA Plut_1320 Aspartyl-tRNA synthetasechromosome CDS1494649 1815 - 0.591185
NA Plut_1606 Ribosomal protein L28chromosome CDS1799274 219 + 0.511416
NA Plut_1965 Ribosomal protein L1chromosome CDS2188967 690 - 0.586957
NA Plut_1964 50S ribosomal protein L10chromosome CDS2188430 519 - 0.549133
NA Plut_0967 16S rRNA processing protein RimMchromosome CDS1092634 504 + 0.571429
NA Plut_1958 Elongation factor Pchromosome CDS2176616 639 + 0.533646
NA Plut_1287 16S rRNA dimethylasechromosome CDS1454670 822 + 0.580292
NA Plut_0185 Ribosomal protein S19chromosome CDS190501 297 + 0.511784
NA Plut_2132 Ribosomal protein L34chromosome CDS2362748 162 - 0.530864
NA Plut_0179 Ribosomal protein S10chromosome CDS187645 312 + 0.471154
NA Plut_1405 Protein of unknown function UPF0004chromosome CDS1586718 1323 + 0.589569
NA Plut_1357 Lysyl-tRNA synthetase, class-2chromosome CDS1533644 1506 + 0.564409
NA Plut_0196 50S ribosomal protein L6chromosome CDS195184 540 + 0.562963
NA Plut_0246 release factors family proteinchromosome CDS242826 405 + 0.595062
NA Plut_1623 conserved hypothetical proteinchromosome CDS1819115 393 - 0.524173
NA Plut_0190 30S ribosomal protein S17chromosome CDS192715 285 + 0.547368
NA Plut_0116 Ribosomal protein S18chromosome CDS129983 273 + 0.505495
NA Plut_0276 Dihydrouridine synthase TIM-barrel protein nifR3chromosome CDS281789 1065 + 0.606573
NA Plut_0594 Seryl-tRNA synthetase, class IIachromosome CDS695188 1293 - 0.595514
NA Plut_0199 Ribosomal protein L30chromosome CDS196685 186 + 0.548387
NA Plut_1490 Modification methylase HemKchromosome CDS1676143 891 - 0.64422
NA Plut_0568 Tyrosyl-tRNA synthetase, class Ibchromosome CDS664357 1218 - 0.593596
NA Plut_0191 Ribosomal protein L14chromosome CDS193039 369 + 0.555556
NA Plut_0177 Translation elongation factor Gchromosome CDS184210 2115 + 0.565012
NA Plut_1508 Ribosomal protein L21chromosome CDS1698083 360 + 0.488889
NA Plut_0176 Ribosomal protein S7chromosome CDS183700 468 + 0.555556
NA Plut_0423 Isoleucyl-tRNA synthetase, class Iachromosome CDS497226 3270 + 0.582875
NA Plut_1203 Peptidyl-tRNA hydrolasechromosome CDS1362885 573 + 0.572426
NA Plut_1404 Queuine tRNA-ribosyltransferasechromosome CDS1585585 1131 + 0.58267
NA Plut_0968 tRNA (guanine-N1-)-methyltransferasechromosome CDS1093208 699 + 0.58083
NA Plut_0588 metallo-beta-lactamase superfamily proteinchromosome CDS688140 1395 + 0.614337
NA Plut_0204 30S ribosomal protein S13chromosome CDS200136 378 + 0.555556
NA Plut_0211 Cysteinyl-tRNA synthetase, class Iachromosome CDS205317 1452 - 0.581956
NA Plut_0403 Ribosomal protein S2chromosome CDS479145 762 + 0.58399
NA Plut_1616 RNA methyltransferase TrmH, group 3chromosome CDS1807844 747 - 0.610442
NA Plut_1492 Prolyl-tRNA synthetase, archael and euk typechromosome CDS1678004 1446 + 0.567773
NA Plut_2007 mannose-1-phosphate guanylyltransferase, putativechromosome CDS2233925 975 + 0.618462
NA Plut_0198 Ribosomal protein S5chromosome CDS196152 516 + 0.534884
NA Plut_1775 Ribosomal protein S15chromosome CDS1983220 270 - 0.577778
NA Plut_0960 conserved hypothetical proteinchromosome CDS1085124 489 + 0.605317
NA Plut_1472 Methionyl-tRNA formyltransferasechromosome CDS1657596 945 - 0.628571
NA Plut_0180 50S ribosomal protein L3chromosome CDS187978 630 + 0.557143
NA Plut_0194 30S ribosomal protein S14chromosome CDS194430 270 + 0.592593
NA Plut_1205 SpoU rRNA methylase family proteinchromosome CDS1364428 549 - 0.602914
NA Plut_1313 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1487525 1041 + 0.553314
NA Plut_0969 Ribosomal protein L19chromosome CDS1093944 363 + 0.595041
NA Plut_1966 Ribosomal protein L11chromosome CDS2189729 426 - 0.551643
NA Plut_0296 SpoU rRNA methylase family proteinchromosome CDS300087 798 + 0.639098
NA Plut_0476 Initiation factor 2B alpha/beta/deltachromosome CDS558726 1062 - 0.596987
NA Plut_0182 50S ribosomal protein L23chromosome CDS189285 312 + 0.560897
NA Plut_1721 Glutamyl-tRNA synthetasechromosome CDS1928238 1515 - 0.586799
NA Plut_1952 Alanyl-tRNA synthetase, class IIcchromosome CDS2168577 2664 - 0.606607
NA Plut_0135 Ribosomal protein S32chromosome CDS147710 192 - 0.614583
NA Plut_0114 Ribosomal protein S6chromosome CDS129007 402 + 0.537313
NA Plut_0187 ribosomal protein S3chromosome CDS191208 759 + 0.561265
NA Plut_1786 Histidyl-tRNA synthetase, class IIachromosome CDS1995444 1293 - 0.612529
NA Plut_0237 Protein of unknown function UPF0004chromosome CDS234560 1341 + 0.615213
NA Plut_0203 Translation initiation factor IF-1chromosome CDS199652 219 + 0.488584
NA Plut_2031 Peptide chain release factor 2chromosome CDS2261839 1092 + 0.581502
NA Plut_0206 Ribosomal protein S4chromosome CDS200982 612 + 0.535948
NA Plut_1825 hypothetical proteinchromosome CDS2038263 1347 - 0.555308
NA Plut_1759 Ribosomal protein S20pchromosome CDS1969081 276 - 0.550725
NA Plut_0318 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS327805 1104 - 0.602355
NA Plut_1151 polyA polymerase family proteinchromosome CDS1307468 1428 + 0.60084
NA Plut_0012 Ribonuclease E and Gchromosome CDS16195 1713 + 0.58202
NA Plut_1779 Initiation factor 2chromosome CDS1985761 2748 - 0.607715
NA Plut_0987 DEAD/DEAH box helicase-likechromosome CDS1115046 1257 - 0.584726
NA Plut_0188 Ribosomal protein L16chromosome CDS192011 420 + 0.559524
NA Plut_0205 30S ribosomal protein S11chromosome CDS200561 384 + 0.601562
NA Plut_1180 tRNA isopentenyltransferasechromosome CDS1338995 915 + 0.604372
NA Plut_0178 Translation elongation factor Tuchromosome CDS186385 1182 + 0.569374
NA Plut_0591 Fmu, rRNA SAM-dependent methyltransferasechromosome CDS691167 1329 - 0.629044
NA Plut_1732 RNA binding S1chromosome CDS1939607 1770 - 0.566102
NA Plut_1973 Translation elongation factor Gchromosome CDS2196283 2073 + 0.575012
NA Plut_0401 Ribosomal protein L13chromosome CDS478128 450 + 0.542222
NA Plut_1342 Ribosomal protein L25chromosome CDS1516743 609 + 0.568145
NA Plut_0386 Valyl-tRNA synthetase, class Iachromosome CDS455464 2706 + 0.599409
NA Plut_0117 Ribosomal protein L9chromosome CDS130292 456 + 0.565789
NA Plut_0266 conserved hypothetical proteinchromosome CDS271488 1584 + 0.585859
NA Plut_1777 tRNA pseudouridine synthase Bchromosome CDS1984489 870 - 0.606897
NA Plut_1686 Sua5/YciO/YrdC/YwlCchromosome CDS1892516 948 + 0.642405
NA Plut_1255 tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS1417161 660 + 0.60303
NA Plut_0120 Ribosomal protein L20chromosome CDS132370 348 - 0.531609
NA Plut_1963 Ribosomal protein L7/L12chromosome CDS2187982 372 - 0.580645
NA Plut_0122 Initiation factor 3chromosome CDS132988 621 - 0.566828
NA Plut_0017 Glycyl-tRNA synthetase, alpha2 dimerchromosome CDS22335 1470 - 0.586395
NA Plut_0189 Ribosomal protein L29chromosome CDS192461 207 + 0.531401
NA Plut_1175 tRNA pseudouridine synthasechromosome CDS1332791 762 - 0.608924
NA Plut_0355 conserved hypothetical proteinchromosome CDS365997 1248 + 0.616987
NA Plut_0404 Elongation factor Tschromosome CDS479945 867 + 0.567474
NA Plut_0555 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS648852 1026 + 0.633528
NA Plut_0349 Ribosomal protein L31chromosome CDS358610 228 - 0.548246
NA Plut_0402 30S ribosomal protein S9chromosome CDS478596 390 + 0.576923
NA Plut_0193 50S ribosomal protein L5chromosome CDS193824 585 + 0.540171
NA Plut_1636 Leucyl-tRNA synthetase, class Iachromosome CDS1834668 2418 + 0.592639
NA Plut_0119 Phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS131329 1026 - 0.567251
NA Plut_1509 Ribosomal protein L27chromosome CDS1698482 255 + 0.552941
NA Plut_0202 Peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS198824 786 + 0.573791
NA Plut_0337 Glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS347543 288 + 0.559028
NA Plut_2126 23S rRNA methyltransferasechromosome CDS2357221 1431 - 0.593291
NA Plut_2061 ribosomal protein L11 methyltransferase, putativechromosome CDS2290894 861 + 0.584204
NA Plut_0620 photosystem P840 reaction center protein PscDchromosome CDS723765 435 - 0.556322
NA Plut_0163 Glutamyl-tRNA(Gln) amidotransferase B subunitchromosome CDS170262 1428 + 0.586835
NA Plut_0195 30S ribosomal protein S8chromosome CDS194760 396 + 0.507576
NA Plut_0123 Threonyl-tRNA synthetase, class IIachromosome CDS133630 2034 - 0.585546
NA Plut_0192 Ribosomal protein L24chromosome CDS193525 243 + 0.522634
NA Plut_0181 50S ribosomal protein L4chromosome CDS188627 627 + 0.558214
NA Plut_1728 MiaB-like tRNA modifying enzymechromosome CDS1935151 1317 - 0.632498
NA Plut_0121 Ribosomal protein L35chromosome CDS132746 198 - 0.530303
NA Plut_1734 conserved hypothetical proteinchromosome CDS1942300 1092 + 0.59707
NA Plut_0197 Ribosomal protein L18chromosome CDS195771 360 + 0.522222
NA Plut_1635 Polyribonucleotide nucleotidyltransferasechromosome CDS1832329 2199 + 0.592542
NA Plut_0186 Ribosomal protein L22chromosome CDS190831 360 + 0.558333
NA Plut_1349 Ribosomal protein L33chromosome CDS1525117 183 + 0.47541
NA Plut_0783 Pseudouridine synthase, RluDchromosome CDS897504 1065 - 0.614084
NA Plut_0498 cytosine deaminase, putativechromosome CDS583231 462 + 0.612554
NA Plut_2092 Arginyl-tRNA synthetase, class Icchromosome CDS2324671 1659 + 0.557565
NA Plut_1778 Ribosome-binding factor Achromosome CDS1985385 360 - 0.602778
NA Plut_1749 Glutamyl-tRNA(Gln) amidotransferase A subunitchromosome CDS1956799 1458 - 0.60631
NA Plut_0348 Ribosome recycling factorchromosome CDS358001 561 - 0.552585
NA Plut_0283 Ribosomal protein S21chromosome CDS288961 198 + 0.489899