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2024-05-13 23:39:52

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Aster yellows witches-broom phytoplasma AYWB

Number of genes found: 109

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Aster yellows witches-broom phytoplasma AYWB
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA AYWB_628 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS654833 336 - 0.297619
NA AYWB_043 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS52274 204 - 0.254902
NA AYWB_269 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS285462 708 + 0.235876
NA AYWB_536 GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS553182 1092 - 0.298535
NA AYWB_006 exopolyphosphatase-related proteinRecName: Full=50S ribosomal protein L9; chromosome CDS4415 2550 + 0.286275
NA AYWB_415 dimethyladenosine transferaseSubName: Full=Dimethyladenosine transferase; EC=2.1.1.-; chromosome CDS427223 1353 - 0.257945
NA AYWB_196 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS215987 222 - 0.225225
alaS AYWB_416 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS429028 2595 + 0.31368
argS AYWB_316 arginyl-tRNA synthetaseSubName: Full=Arginyl-tRNA synthetase; EC=6.1.1.19; chromosome CDS335373 1806 - 0.266888
asnS AYWB_671 aspartyl/asparaginyl-tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS704185 1512 - 0.293651
aspS AYWB_593 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS614810 1731 - 0.311958
codA AYWB_606 cytosine deaminaseSubName: Full=Cytosine deaminase; EC=3.5.4.1; chromosome CDS629862 486 + 0.292181
cysS AYWB_579 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS601919 1317 - 0.274108
efp AYWB_445 protein translation elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS459480 570 - 0.264912
frr AYWB_551 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS570779 555 - 0.308108
fusA AYWB_457 protein translation elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS472284 2100 - 0.366667
glnS AYWB_580 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS603337 1350 - 0.311852
glnS AYWB_116 glutaminyl-tRNA synthetaseSubName: Full=Glutaminyl-tRNA synthetase; EC=6.1.1.18; chromosome CDS135433 1668 - 0.333933
grs1 AYWB_109 glycyl-tRNA synthetaseRecName: Full=Glycine--tRNA ligase; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase; chromosome CDS128660 1359 - 0.349522
hisS AYWB_594 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS616530 1284 - 0.308411
ileS AYWB_535 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; chromosome CDS550382 2712 - 0.314159
infA AYWB_499 bacterial protein translation initiation factor 1RecName: Full=Translation initiation factor IF-1; chromosome CDS520617 237 - 0.278481
infB AYWB_570 bacterial protein translation initiation factor 2RecName: Full=Translation initiation factor IF-2; chromosome CDS589840 1872 - 0.32265
infC AYWB_662 bacterial protein translation initiation factor 3SubName: Full=Bacterial protein translation initiation factor 3; chromosome CDS691506 348 - 0.295977
ksgA AYWB_648 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS678197 807 + 0.251549
leuS AYWB_656 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; chromosome CDS685641 2466 - 0.327251
lysU AYWB_128 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS151673 1491 + 0.329309
map AYWB_500 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS520933 744 - 0.333333
metG AYWB_489 methiony-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; chromosome CDS513112 1563 - 0.314139
miaA AYWB_446 tRNA delta(2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS460102 876 - 0.284247
pcnB AYWB_607 poly(A) polymeraseSubName: Full=Poly(A) polymerase; EC=2.7.7.19; chromosome CDS630708 1224 + 0.28268
pheS AYWB_133 phenylalanyl-tRNA synthetase alpha chainRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS157330 1032 + 0.313953
pnp AYWB_470 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS490475 2148 - 0.344972
prfA AYWB_008 bacterial peptide chain release factor 1SubName: Full=Bacterial peptide chain release factor 1; chromosome CDS8371 1056 + 0.315341
prfB AYWB_305 bacterial peptide chain release factor 2SubName: Full=Bacterial peptide chain release factor 2; chromosome CDS320029 1113 + 0.294699
proS AYWB_475 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS500772 1425 - 0.334737
pth AYWB_567 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS588636 567 - 0.248677
rbfA AYWB_569 ribosome-binding factor ASubName: Full=Ribosome-binding factor A; chromosome CDS589495 342 - 0.24269
rluA AYWB_590 ribosomal large subunit pseudouridine synthase DRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS610191 921 - 0.306189
rmpD AYWB_504 LSU ribosomal protein L30P/L7ERecName: Full=50S ribosomal protein L30; chromosome CDS524026 198 - 0.287879
rnpA AYWB_473 ribonuclease PRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS499940 387 - 0.26615
rplA AYWB_464 LSU ribosomal protein L1PRecName: Full=50S ribosomal protein L1; chromosome CDS484380 711 - 0.337553
rplB AYWB_519 LSU ribosomal protein L2PRecName: Full=50S ribosomal protein L2; chromosome CDS530138 831 - 0.397112
rplC AYWB_522 LSU ribosomal protein L3PRecName: Full=50S ribosomal protein L3; chromosome CDS531926 666 - 0.351351
rplD AYWB_521 LSU ribosomal protein L1ERecName: Full=50S ribosomal protein L4; chromosome CDS531316 624 - 0.360577
rplE AYWB_510 LSU ribosomal protein L5PRecName: Full=50S ribosomal protein L5; chromosome CDS526412 546 - 0.322344
rplF AYWB_507 LSU ribosomal protein L6PRecName: Full=50S ribosomal protein L6; chromosome CDS525113 597 - 0.341709
rplJ AYWB_463 LSU ribosomal protein L10PRecName: Full=50S ribosomal protein L10; chromosome CDS483832 534 - 0.318352
rplK AYWB_465 LSU ribosomal protein L11PRecName: Full=50S ribosomal protein L11; chromosome CDS485161 426 - 0.347418
rplL AYWB_462 LSU ribosomal protein L12PRecName: Full=50S ribosomal protein L7/L12; chromosome CDS483410 411 - 0.326034
rplM AYWB_582 LSU ribosomal protein L13PRecName: Full=50S ribosomal protein L13; chromosome CDS605185 459 - 0.32244
rplN AYWB_512 LSU ribosomal protein L14PRecName: Full=50S ribosomal protein L14; chromosome CDS527334 363 - 0.333333
rplO AYWB_503 LSU ribosomal protein L15PRecName: Full=50S ribosomal protein L15; chromosome CDS523589 438 - 0.358447
rplP AYWB_515 LSU ribosomal protein L16PRecName: Full=50S ribosomal protein L16; chromosome CDS528292 423 - 0.36643
rplQ AYWB_494 LSU ribosomal protein L17PRecName: Full=50S ribosomal protein L17; chromosome CDS518258 357 - 0.308123
rplR AYWB_506 LSU ribosomal protein L18PRecName: Full=50S ribosomal protein L18; chromosome CDS524750 354 - 0.370057
rplT AYWB_660 LSU ribosomal protein L20PRecName: Full=50S ribosomal protein L20; chromosome CDS690487 684 - 0.312865
rplU AYWB_629 LSU ribosomal protein L21PRecName: Full=50S ribosomal protein L21; chromosome CDS655174 336 - 0.318452
rplV AYWB_517 LSU ribosomal protein L22PRecName: Full=50S ribosomal protein L22; chromosome CDS529434 390 - 0.34359
rplW AYWB_520 LSU ribosomal protein L23PRecName: Full=50S ribosomal protein L23; chromosome CDS531026 291 - 0.268041
rplX AYWB_511 LSU ribosomal protein L24PRecName: Full=50S ribosomal protein L24; chromosome CDS526973 348 - 0.33908
rpls AYWB_308 LSU ribosomal protein L19PRecName: Full=50S ribosomal protein L19; chromosome CDS322678 357 + 0.333333
rpmA AYWB_627 LSU ribosomal protein L27PRecName: Full=50S ribosomal protein L27; chromosome CDS654553 279 - 0.340502
rpmB AYWB_603 LSU ribosomal protein L28PRecName: Full=50S ribosomal protein L28; chromosome CDS628409 189 + 0.338624
rpmC AYWB_514 LSU ribosomal protein L29PSubName: Full=LSU ribosomal protein L29P; chromosome CDS527972 324 - 0.339506
rpmE AYWB_604 LSU ribosomal protein L31PRecName: Full=50S ribosomal protein L31; chromosome CDS628768 273 + 0.369963
rpmF AYWB_525 LSU ribosomal protein L32PRecName: Full=50S ribosomal protein L32; chromosome CDS534166 207 - 0.309179
rpmG AYWB_476 LSU ribosomal protein L33PRecName: Full=50S ribosomal protein L33; chromosome CDS504112 150 - 0.266667
rpmH AYWB_474 LSU ribosomal protein L34PRecName: Full=50S ribosomal protein L34; chromosome CDS500470 135 - 0.348148
rpmI AYWB_661 LSU ribosomal protein L35PRecName: Full=50S ribosomal protein L35; chromosome CDS691185 207 - 0.323671
rpmJ AYWB_498 LSU ribosomal protein L36PRecName: Full=50S ribosomal protein L36; chromosome CDS520488 117 - 0.34188
rpsB AYWB_554 SSU ribosomal protein S2PRecName: Full=30S ribosomal protein S2; chromosome CDS573079 810 - 0.340741
rpsC AYWB_516 SSU ribosomal protein S3PRecName: Full=30S ribosomal protein S3; chromosome CDS528692 759 - 0.353096
rpsD AYWB_241 SSU ribosomal protein S4PRecName: Full=30S ribosomal protein S4; chromosome CDS248691 597 + 0.309883
rpsE AYWB_505 SSU ribosomal protein S5PRecName: Full=30S ribosomal protein S5; chromosome CDS524220 558 - 0.336918
rpsF AYWB_003 SSU ribosomal protein S6PRecName: Full=30S ribosomal protein S6; chromosome CDS3331 288 + 0.236111
rpsG AYWB_458 SSU ribosomal protein S7PRecName: Full=30S ribosomal protein S7; chromosome CDS474377 471 - 0.375796
rpsH AYWB_508 SSU ribosomal protein S8PRecName: Full=30S ribosomal protein S8; chromosome CDS525714 393 - 0.330789
rpsI AYWB_581 SSU ribosomal protein S9PRecName: Full=30S ribosomal protein S9; chromosome CDS604788 393 - 0.343511
rpsJ AYWB_524 SSU ribosomal protein S10PRecName: Full=30S ribosomal protein S10; chromosome CDS532772 318 - 0.289308
rpsK AYWB_496 SSU ribosomal protein S11PRecName: Full=30S ribosomal protein S11; chromosome CDS519681 387 - 0.421189
rpsL AYWB_459 SSU ribosomal protein S12PRecName: Full=30S ribosomal protein S12; chromosome CDS474918 420 - 0.383333
rpsM AYWB_497 SSU ribosomal protein S13PRecName: Full=30S ribosomal protein S13; chromosome CDS520095 381 - 0.312336
rpsN AYWB_509 SSU ribosomal protein S14PRecName: Full=30S ribosomal protein S14; chromosome CDS526128 270 - 0.359259
rpsO AYWB_585 SSU ribosomal protein S15PRecName: Full=30S ribosomal protein S15; chromosome CDS606843 225 - 0.275556
rpsP AYWB_306 SSU ribosomal protien S16PRecName: Full=30S ribosomal protein S16; chromosome CDS321585 264 + 0.284091
rpsQ AYWB_513 SSU ribosomal protein S17PRecName: Full=30S ribosomal protein S17; chromosome CDS527709 264 - 0.295455
rpsR AYWB_005 SSU ribosomal protein S18PRecName: Full=30S ribosomal protein S18; chromosome CDS4082 240 + 0.275
rpsS AYWB_518 SSU ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS529844 282 - 0.340426
rpsT AYWB_633 SSU ribosomal protein S20PRecName: Full=30S ribosomal protein S20; chromosome CDS658980 261 - 0.260536
rpsU AYWB_112 SSU ribosomal protein S21PRecName: Full=30S ribosomal protein S21; chromosome CDS131751 174 - 0.356322
rsuA AYWB_483 16S rRNA pseudouridylate synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS509513 738 - 0.306233
serS AYWB_632 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS657292 1275 - 0.316078
spoU AYWB_576 23S rRNA methyltransferaseSubName: Full=23S rRNA methyltransferase; EC=2.1.1.-; chromosome CDS596732 705 - 0.292199
spoU AYWB_468 23S rRNA methyltransferaseSubName: Full=23S rRNA methyltransferase; EC=2.1.1.-; chromosome CDS487231 708 - 0.309322
srmB AYWB_054 superfamily II DNA and RNA helicaseSubName: Full=Superfamily II DNA and RNA helicase; chromosome CDS62896 1644 - 0.288929
srmB AYWB_318 superfamily II DNA and RNA helicaseSubName: Full=Superfamily II DNA and RNA helicase; chromosome CDS338683 1374 - 0.26492
sua5 AYWB_009 translation factor SUA5 proteinSubName: Full=Translation factor SUA5 protein; chromosome CDS9511 591 + 0.292724
thrS AYWB_663 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS693661 1926 - 0.32243
trmD AYWB_307 tRNA (Guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS321907 729 + 0.288066
trmU AYWB_597 tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS620396 1137 - 0.320141
trpS AYWB_312 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS326074 1017 - 0.262537
truA AYWB_493 tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS517356 732 - 0.293716
truB AYWB_484 tRNA pseudouridine synthase BRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS510361 852 - 0.286385
tsf AYWB_553 protein translation elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS572152 825 - 0.312727
tufB AYWB_456 protein translation elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS470965 1185 - 0.367932
tyrS AYWB_309 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS322985 1293 + 0.269142
udk AYWB_578 uridine kinaseSubName: Full=Uridine kinase; EC=2.7.1.48; chromosome CDS600089 1641 - 0.270567
valS AYWB_012 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; chromosome CDS12105 2631 + 0.290384