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COG category: Translation, ribosomal structure and biogenesis
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 180

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Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SSO_1352 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1426399 393 - 0.503817
NA SSO_2614 putative ATP synthase beta subunitRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2765778 738 - 0.547425
NA SSO_2316 putative transformylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2443874 1983 + 0.512355
NA SSO_1271 hypothetical bacteriophage proteinSubName: Full=Hypothetical bacteriophage protein; chromosome CDS1345257 624 + 0.525641
NA SSO_P208 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS182829 288 + 0.395833
alaS SSO_2841 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2980471 2631 - 0.536678
ansA SSO_1388 cytoplasmic L-asparaginase ISubName: Full=Cytoplasmic L-asparaginase I; chromosome CDS1461663 1017 - 0.511308
ansB SSO_3239 periplasmic L-asparaginase IISubName: Full=Periplasmic L-asparaginase II; chromosome CDS3414394 1047 + 0.527221
argS SSO_1242 arginine tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS1316621 1737 - 0.528497
asnS SSO_0933 asparagine tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS1004729 1401 - 0.528908
aspS SSO_1275 aspartate tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1349891 1773 + 0.537507
cafA SSO_3388 bundles of cytoplasmic filamentsSubName: Full=Bundles of cytoplasmic filaments; chromosome CDS3569113 1488 - 0.521505
cca SSO_3193 tRNA nucleotidyl transferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS3356139 1239 + 0.560129
cysS SSO_0492 cysteine tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS521289 1386 - 0.541126
dbpA SSO_1788 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1884246 1374 - 0.515284
deaD SSO_3308 inducible ATP-independent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3482909 1941 - 0.552808
def SSO_3427 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS3606490 510 + 0.466667
efp SSO_4331 elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4602205 567 + 0.499118
fmt SSO_3428 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS3607014 948 + 0.531646
frr SSO_0184 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS207793 558 + 0.508961
ftsJ SSO_3327 cell division proteinRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3506108 630 - 0.504762
fusA SSO_3470 GTP-binding protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS3633399 2115 - 0.508747
glnS SSO_0634 glutamine tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS669030 1665 + 0.530931
gltX SSO_2491 glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2631843 1416 - 0.526836
glyQ SSO_3829 glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS4022085 912 + 0.558114
glyS SSO_3830 glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS4023006 2070 + 0.553623
gshB SSO_3101 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome CDS3263604 951 + 0.534175
hemK SSO_1966 possible protoporphyrinogen oxidaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS2067829 834 - 0.547962
hisS SSO_2596 histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2742843 1275 - 0.545098
ileS SSO_0031 isoleucine tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS29557 2817 + 0.555556
infA SSO_0885 protein chain initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS940044 219 - 0.484018
infB SSO_3314 protein chain initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS3490280 2673 - 0.534605
infC SSO_1440 protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS1516127 435 + 0.478161
iucB SSO_3602 siderophore biosynthesis proteinSubName: Full=Siderophore biosynthesis protein; chromosome CDS3769275 948 + 0.564346
ksgA SSO_0059 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS60945 822 - 0.53163
lasT SSO_4553 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4824555 687 + 0.502183
leuS SSO_0596 leucine tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS633484 2583 - 0.532714
lysS SSO_3043 lysine tRNA synthetase, constitutiveRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; chromosome CDS3203463 1518 - 0.529644
lysU SSO_4306 lysine tRNA synthetase, inducibleRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; chromosome CDS4573626 1518 - 0.47365
map SSO_0180 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS203633 795 - 0.509434
miaA SSO_4356 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4626100 951 + 0.535226
ospD1 SSO_P022 OspD1SubName: Full=OspD1; pSS_046 CDS16954 678 + 0.358407
pcnB SSO_0155 poly(A) polymerase IRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome CDS171926 1365 - 0.562637
pheS SSO_1444 phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1517714 984 + 0.539634
pnp SSO_3310 polynucleotide phosphorylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS3485971 2205 - 0.533787
prfA SSO_1967 peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS2068662 1083 - 0.528163
prfC SSO_4525 peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4794002 1590 + 0.536478
prfH SSO_0278 probable peptide chain release factorSubName: Full=Probable peptide chain release factor; chromosome CDS306456 501 + 0.536926
prmA SSO_3400 methylase for 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3581857 882 + 0.543084
proS SSO_0208 proline tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS233370 1719 - 0.544503
pth SSO_1974 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS2076241 585 + 0.497436
queA SSO_0382 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS410105 1071 + 0.54155
rbfA SSO_3313 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS3489715 402 - 0.529851
rhlB SSO_3951 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS4175055 1266 - 0.520537
rhlE SSO_0776 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS819742 1365 + 0.5663
rimJ SSO_1086 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5SubName: Full=Acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; chromosome CDS1166867 585 + 0.494017
rimK SSO_0837 ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Poly-alpha-glutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS888767 903 + 0.560354
rimL SSO_1715 acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferaseSubName: Full=Acetylation of N-terminal serine of 30S ribosomal subunit protein L7 acetyl transferase; chromosome CDS1818350 537 - 0.441341
rmf SSO_0957 ribosome modulation factorRecName: Full=Ribosome modulation factor; Short=RMF; chromosome CDS1033808 168 + 0.541667
rna SSO_0563 RNase ISubName: Full=RNase I; chromosome CDS603200 807 - 0.511772
rnd SSO_1357 RNase DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1432119 1128 + 0.539894
rne SSO_1104 RNase ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1182473 3186 - 0.556497
rnpA SSO_3654 RNase P, protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS3825404 360 + 0.558333
rph SSO_3763 RNase PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS3950555 717 + 0.566248
rplA SSO_4157 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS4398010 705 + 0.51773
rplB SSO_3458 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS3623341 822 - 0.526764
rplC SSO_3461 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS3625095 630 - 0.515873
rplD SSO_3460 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS3624479 606 - 0.529703
rplE SSO_3449 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS3619699 540 - 0.496296
rplF SSO_3446 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS3618407 534 - 0.518727
rplI SSO_4386 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4651991 450 + 0.5
rplJ SSO_4158 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS4399127 498 + 0.522088
rplK SSO_4156 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS4397578 429 + 0.519814
rplL SSO_4159 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS4399691 366 + 0.461749
rplM SSO_3372 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3549916 429 - 0.501166
rplN SSO_3451 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS3620578 372 - 0.510753
rplO SSO_3442 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS3616905 435 - 0.537931
rplP SSO_3454 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS3621557 411 - 0.518248
rplQ SSO_3435 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS3612416 384 - 0.533854
rplR SSO_3445 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS3618044 354 - 0.533898
rplS SSO_2763 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2916521 348 - 0.479885
rplT SSO_1442 50S ribosomal subunit protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS1516908 357 + 0.484594
rplU SSO_3334 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3512213 312 - 0.483974
rplV SSO_3456 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS3622699 333 - 0.498498
rplW SSO_3459 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS3624180 303 - 0.481848
rplX SSO_3450 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS3620253 315 - 0.463492
rplY SSO_2241 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS2355245 285 + 0.505263
rpmA SSO_3333 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3511935 258 - 0.5
rpmB SSO_3770 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3956208 237 + 0.527426
rpmC SSO_3453 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS3621366 192 - 0.541667
rpmD SSO_3443 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS3617343 180 - 0.5
rpmE SSO_4105 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS4341053 213 + 0.492958
rpmF SSO_1109 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1188658 174 + 0.54023
rpmG SSO_3771 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3956465 168 + 0.404762
rpmH SSO_3653 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS3825247 141 + 0.51773
rpmI SSO_1441 50S ribosomal subunit protein ARecName: Full=50S ribosomal protein L35; chromosome CDS1516658 198 + 0.5
rpmJ SSO_3440 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS3615418 117 - 0.478632
rpsA SSO_0913 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS977703 1674 + 0.509558
rpsB SSO_0181 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS204795 726 + 0.512397
rpsC SSO_3455 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS3621980 702 - 0.507123
rpsD SSO_3437 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS3613855 621 - 0.507246
rpsE SSO_3444 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS3617526 504 - 0.5
rpsF SSO_4383 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS4651001 396 + 0.527778
rpsG SSO_3471 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS3635610 471 - 0.494692
rpsH SSO_3447 30S ribosomal subunit protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS3618953 393 - 0.501272
rpsI SSO_3371 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3549508 393 - 0.521628
rpsJ SSO_3462 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS3625757 312 - 0.554487
rpsK SSO_3438 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS3614509 390 - 0.515385
rpsL SSO_3472 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS3636177 375 - 0.533333
rpsM SSO_3439 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS3614915 357 - 0.518207
rpsN SSO_3448 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS3619379 306 - 0.529412
rpsO SSO_3311 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3488353 270 - 0.518519
rpsP SSO_2766 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2918275 249 - 0.514056
rpsQ SSO_3452 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS3621112 255 - 0.47451
rpsR SSO_4385 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4651722 228 + 0.526316
rpsS SSO_3457 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS3623046 279 - 0.494624
rpsT SSO_0028 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS27981 264 - 0.465909
rpsU SSO_3202 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS3365012 216 + 0.518519
rsuA SSO_2239 16S pseudouridylate 516 synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2352515 696 - 0.530172
selB SSO_3818 selenocysteinyl-tRNA-specific translation factorSubName: Full=Selenocysteinyl-tRNA-specific translation factor; chromosome CDS4011373 1845 + 0.566396
serS SSO_0894 serine tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS953321 1293 + 0.528229
sfhB SSO_2720 suppressor of ftsH mutationRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2881287 981 - 0.529052
shiE SSO_3599 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3765345 504 + 0.361111
smpA SSO_2773 small membrane protein ARecName: Full=Outer membrane protein assembly factor BamE; chromosome CDS2925985 300 + 0.496667
spoU SSO_3754 putative RNA methylaseSubName: Full=Putative RNA methylase; chromosome CDS3941897 690 - 0.552174
srmB SSO_2702 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2859229 1335 + 0.549064
sun SSO_3429 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS3608007 1290 + 0.5
tgt SSO_0383 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS411231 1128 + 0.511525
thrS SSO_1439 threonine tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1514087 1929 + 0.497667
trmA SSO_4138 tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS4381555 1101 - 0.509537
trmD SSO_2764 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2916910 768 - 0.532552
trpS SSO_3515 tryptophan tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS3675281 1005 - 0.519403
truA SSO_2376 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2506592 813 - 0.554736
truB SSO_3312 tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3488771 945 - 0.52381
tsf SSO_0182 protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS205778 852 + 0.5
tufA SSO_3469 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; chromosome CDS3632144 1185 - 0.531646
tufB SSO_4153 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; chromosome CDS4395075 1185 + 0.531646
tyrS SSO_1519 tyrosine tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS1594692 1275 + 0.520784
valS SSO_4443 valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4711534 2856 - 0.55112
yabO SSO_0064 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS67632 660 - 0.543939
yadB SSO_0156 putative tRNA synthetaseRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS173383 927 - 0.530744
yadP SSO_0159 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS175698 540 - 0.561111
ybjF SSO_0844 putative enzymeRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS895318 1128 + 0.545213
yceC SSO_1106 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1186231 960 + 0.515625
ycfB SSO_1151 conserved hypothetical proteinRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS1232690 1152 - 0.532118
ychF SSO_1975 putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS2076942 1092 + 0.509158
yciH SSO_1858 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1956552 330 - 0.49697
yciL SSO_1874 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1972585 873 - 0.544101
yciO SSO_1876 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1974812 657 - 0.488584
yeiP SSO_2227 putative elongation factorRecName: Full=Elongation factor P-like protein; chromosome CDS2337992 828 + 0.506039
yfcB SSO_2389 putative adenine-specific methylaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS2519286 1266 - 0.515008
yfhC SSO_2642 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2801328 537 - 0.543762
yfiA SSO_2748 putative yhbH sigma 54 modulatorSubName: Full=Putative yhbH sigma 54 modulator; chromosome CDS2905058 342 + 0.459064
yfiF SSO_2707 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2863824 1038 - 0.564547
yfjA SSO_2765 conserved hypothetical proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS2917708 558 - 0.491039
ygcA SSO_2942 putative enzymeRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS3083426 1302 - 0.512289
ygjO SSO_3121 putative enzymeRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS3279227 1137 + 0.538259
yhaR SSO_3270 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3444426 453 - 0.520971
yhbH SSO_3351 probable sigma-54 modulation proteinSubName: Full=Probable sigma-54 modulation protein; chromosome CDS3525247 288 + 0.447917
yhbY SSO_3328 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3506863 294 + 0.486395
yhdG SSO_3401 putative dehydrogenaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS3583067 966 + 0.522774
yibK SSO_3799 conserved hypothetical proteinRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS3983775 474 - 0.550633
yicN SSO_3616 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3784568 480 - 0.520833
yihZ SSO_4056 conserved hypothetical proteinRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS4290162 438 + 0.552511
yjbC SSO_4200 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS4451945 873 + 0.5189
yjbN SSO_4229 conserved hypothetical proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS4486092 1038 + 0.534682
yjeA SSO_4341 putative lysyl-tRNA synthetaseRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; chromosome CDS4609118 1008 + 0.518849
yjeJ SSO_4328 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4599099 768 - 0.459635
yjfH SSO_4365 conserved hypothetical proteinRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4636124 732 + 0.557377
yjgF SSO_4424 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4696980 426 - 0.514085
yjgH SSO_4428 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4699267 396 - 0.469697
yjjT SSO_4521 putative enzymeRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4791257 1032 - 0.553295
yleA SSO_0615 conserved hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS655636 1425 - 0.540351
yliG SSO_0818 conserved hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS872248 1326 - 0.527149
ymfC SSO_1153 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1234321 624 - 0.517628
ymjA SSO_1845 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1941865 246 + 0.48374
yohI SSO_2196 putative regulator proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS2302372 948 - 0.53903
yqcB SSO_2948 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS3092729 783 - 0.537676
yrdC SSO_3423 conserved hypothetical proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS3603643 573 - 0.527051
yrfH SSO_3531 conserved hypothetical proteinRecName: Full=Heat shock protein 15; chromosome CDS3691994 402 + 0.532338