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2024-05-18 18:30:59

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 176

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Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SBO_2556 putative ATP synthase beta subunitRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2557791 741 - 0.551957
NA SBO_2292 putative transformylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2280209 1983 + 0.511346
NA SBO_1279 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1267877 393 - 0.51145
alaS SBO_2821 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2830008 2631 + 0.536298
ansA SBO_1320 cytoplasmic L-asparaginase ISubName: Full=Cytoplasmic L-asparaginase I; chromosome CDS1303836 1017 - 0.507375
ansB SBO_3033 periplasmic L-asparaginase IISubName: Full=Periplasmic L-asparaginase II; chromosome CDS3032813 1047 + 0.52531
argS SBO_1124 arginine tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS1127799 1734 - 0.528835
asnS SBO_2221 asparagine tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS2205753 1401 - 0.528194
aspS SBO_1189 aspartate tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1183469 1773 - 0.539199
cafA SBO_3141 bundles of cytoplasmic filamentsSubName: Full=Bundles of cytoplasmic filaments; chromosome CDS3143606 1488 + 0.521505
cca SBO_2912 tRNA nucleotidyl transferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS2916537 1239 + 0.561743
cysS SBO_0417 cysteine tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS432584 1320 - 0.543182
dbpA SBO_1718 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1698741 1374 - 0.516739
deaD SBO_3220 inducible ATP-independent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3227057 1941 + 0.552808
def SBO_3280 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS3281972 510 + 0.462745
efp SBO_4309 elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4357832 567 - 0.499118
fmt SBO_3281 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS3282496 948 + 0.524262
frr SBO_0160 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS178890 558 + 0.507168
ftsJ SBO_3203 cell division proteinRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3207327 630 + 0.501587
fusA SBO_3321 GTP-binding protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS3307350 2115 - 0.506383
glnS SBO_0542 glutamine tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS556975 1665 + 0.530931
gltX SBO_2426 glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2421277 1416 - 0.528955
glyQ SBO_3565 glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS3571432 912 - 0.559211
glyS SBO_3564 glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS3569353 2070 - 0.55314
gshB SBO_3043 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome CDS3040705 951 - 0.537329
hemK SBO_1855 possible protoporphyrinogen oxidaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS1835732 834 - 0.551559
hisS SBO_2538 histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2535023 1275 - 0.541961
ileS SBO_0025 isoleucine tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS22483 2817 + 0.55733
infA SBO_0817 protein chain initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS829029 219 - 0.484018
infB SBO_3214 protein chain initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS3218977 2649 + 0.534541
infC SBO_1376 protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS1352973 435 + 0.48046
iucB SBO_4338 siderophore biosynthesis proteinSubName: Full=Siderophore biosynthesis protein; chromosome CDS4388327 948 + 0.563291
ksgA SBO_0040 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS40671 822 - 0.532847
lasT SBO_4466 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4519113 687 + 0.490539
leuS SBO_0506 leucine tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS522612 2583 - 0.532714
lysS SBO_3102 lysine tRNA synthetase, constitutiveRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS3103299 1518 + 0.525692
map SBO_0156 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS174730 795 - 0.510692
miaA SBO_4285 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4334078 951 - 0.535226
pcnB SBO_0132 poly(A) polymerase IRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome CDS143948 1419 - 0.556025
pheS SBO_1379 phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1354561 984 + 0.54065
pnp SBO_3218 polynucleotide phosphorylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS3223731 2205 + 0.534694
prfA SBO_1856 peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1836565 1083 - 0.530933
prfB SBO_3101 peptide chain release factor RF-2SubName: Full=Peptide chain release factor RF-2; chromosome CDS3102408 882 + 0.53288
prfC SBO_4436 peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4486893 1590 + 0.532704
prfH SBO_0242 probable peptide chain release factorSubName: Full=Probable peptide chain release factor; chromosome CDS257943 501 + 0.542914
prmA SBO_3253 methylase for 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3257303 882 + 0.543084
proS SBO_0183 proline tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS203036 1719 - 0.544503
pth SBO_1863 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1844146 585 + 0.497436
queA SBO_0299 probably S-adenosylmethionine:tRNA ribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS313982 1071 + 0.539683
rbfA SBO_3215 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS3221789 402 + 0.529851
rhlB SBO_3790 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3813851 1266 - 0.522117
rhlE SBO_0685 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS697661 1365 + 0.564835
rimJ SBO_1998 RimJSubName: Full=RimJ; chromosome CDS1970546 585 - 0.494017
rimK SBO_0786 ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Poly-alpha-glutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS794796 903 + 0.55814
rimL SBO_1660 acetyl transferaseSubName: Full=Acetyl transferase; chromosome CDS1642604 537 - 0.441341
rmf SBO_2278 ribosome modulation factorRecName: Full=Ribosome modulation factor; Short=RMF; chromosome CDS2264439 168 - 0.541667
rna SBO_0476 RNase ISubName: Full=RNase I; chromosome CDS494642 807 - 0.513011
rnd SBO_1284 RNase DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1273596 1128 + 0.539894
rne SBO_1980 RNase ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1952408 3186 + 0.557753
rnpA SBO_3673 RnpARecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS3688070 360 - 0.558333
rph SBO_3645 RNase PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS3661432 717 - 0.570432
rplA SBO_4004 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS4037302 705 + 0.516312
rplB SBO_3311 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS3298825 822 - 0.526764
rplC SBO_3314 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS3300579 630 - 0.514286
rplD SBO_3313 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS3299963 606 - 0.529703
rplE SBO_3302 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS3295181 540 - 0.496296
rplF SBO_3299 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS3293889 534 - 0.522472
rplI SBO_4251 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4306456 450 - 0.495556
rplJ SBO_4005 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS4038419 498 + 0.524096
rplK SBO_4003 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS4036870 429 + 0.524476
rplL SBO_4006 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS4038983 366 + 0.461749
rplM SBO_3158 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3163824 429 + 0.503497
rplN SBO_3304 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS3296060 372 - 0.510753
rplO SBO_3295 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS3292387 435 - 0.535632
rplP SBO_3307 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS3297041 411 - 0.518248
rplQ SBO_3288 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS3287898 384 - 0.536458
rplR SBO_3298 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS3293526 354 - 0.536723
rplS SBO_2742 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2753065 348 - 0.482759
rplT SBO_1378 50S ribosomal subunit protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS1353754 333 + 0.483483
rplU SBO_3196 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3201685 312 + 0.483974
rplV SBO_3309 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS3298183 333 - 0.495495
rplW SBO_3312 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS3299664 303 - 0.481848
rplX SBO_3303 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS3295735 315 - 0.463492
rplY SBO_2139 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS2112222 285 - 0.505263
rpmA SBO_3197 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3202017 258 + 0.496124
rpmB SBO_3639 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3657036 237 - 0.527426
rpmC SBO_3306 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS3296850 192 - 0.536458
rpmD SBO_3296 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS3292825 180 - 0.5
rpmE SBO_3953 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS3980589 213 + 0.488263
rpmF SBO_1974 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1947793 174 - 0.54023
rpmG SBO_3638 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3656848 168 - 0.404762
rpmH SBO_3674 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS3688446 141 - 0.51773
rpmI SBO_1377 50S ribosomal subunit protein ARecName: Full=50S ribosomal protein L35; chromosome CDS1353504 198 + 0.494949
rpmJ SBO_3293 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS3290900 117 - 0.478632
rpsA SBO_2199 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS2177943 1674 + 0.510753
rpsB SBO_0157 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS175892 726 + 0.512397
rpsC SBO_3308 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS3297464 702 - 0.509971
rpsD SBO_3290 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS3289337 621 - 0.505636
rpsE SBO_3297 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS3293008 504 - 0.498016
rpsF SBO_4254 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS4307500 396 - 0.527778
rpsG SBO_3322 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS3309561 471 - 0.496815
rpsH SBO_3300 30S ribosomal subunit protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS3294435 393 - 0.501272
rpsI SBO_3159 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3164268 393 + 0.524173
rpsJ SBO_3315 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS3301241 312 - 0.554487
rpsK SBO_3291 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS3289991 390 - 0.515385
rpsL SBO_3323 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS3310128 375 - 0.533333
rpsM SBO_3292 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS3290397 357 - 0.518207
rpsN SBO_3301 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS3294861 306 - 0.526144
rpsO SBO_3217 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3223283 270 + 0.518519
rpsP SBO_2745 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2754819 249 - 0.514056
rpsQ SBO_3305 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS3296596 255 - 0.47451
rpsR SBO_4252 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4306947 228 - 0.526316
rpsS SBO_3310 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS3298530 279 - 0.491039
rpsT SBO_0022 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS20907 264 - 0.465909
rpsU SBO_2923 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS2925972 216 + 0.518519
rsuA SBO_2141 16S pseudouridylate 516 synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2114540 696 + 0.525862
selB SBO_3590 selenocysteinyl-tRNA-specific translation factorSubName: Full=Selenocysteinyl-tRNA-specific translation factor; chromosome CDS3598919 1845 - 0.560434
serS SBO_0826 serine tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS842267 1293 + 0.529776
sfhB SBO_2629 suppressor of ftsH mutationRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2636166 981 - 0.525994
smpA SBO_2752 small membrane protein ASubName: Full=Small membrane protein A; chromosome CDS2762564 153 + 0.470588
spoU SBO_3726 putative RNA methylaseSubName: Full=Putative RNA methylase; chromosome CDS3743108 690 - 0.553623
srmB SBO_2606 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2611242 1335 + 0.550562
sun SBO_3282 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS3283489 1290 + 0.49845
tgt SBO_0300 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS315108 1128 + 0.512411
thrS SBO_1375 threonine tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1350933 1929 + 0.497667
trmA SBO_3984 tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS4020747 1101 - 0.510445
trmD SBO_2743 tRNA methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2753454 768 - 0.533854
trpS SBO_3371 tryptophan tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS3354659 1005 - 0.522388
truA SBO_2355 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2343719 813 - 0.557196
truB SBO_3216 tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3222190 945 + 0.522751
tsf SBO_0158 protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS176875 852 + 0.496479
tufA SBO_3320 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS3306095 1185 - 0.531646
tufB SBO_4000 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS4034366 1185 + 0.533333
tyrS SBO_1497 tyrosine tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS1473590 1275 + 0.516078
valS SBO_4182 valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4236482 2856 + 0.552171
yabO SBO_0045 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS47358 660 - 0.542424
yadB SBO_0133 putative tRNA synthetaseRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS145405 927 - 0.533981
yadP SBO_0136 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS147720 540 - 0.559259
yaeJ SBO_0180 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS200817 423 + 0.550827
ybfP SBO_0551 putative pectinaseSubName: Full=Putative pectinase; chromosome CDS566299 495 + 0.454545
ybjF SBO_0793 putative enzymeRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS801347 1128 + 0.546986
yceC SBO_1977 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1949434 960 - 0.516667
ycfB SBO_1906 conserved hypothetical proteinRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS1885842 1152 + 0.532118
ychF SBO_1864 putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS1844847 1092 + 0.510989
yciH SBO_1782 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1760097 330 - 0.487879
yciL SBO_1797 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1775977 873 - 0.544101
yciO SBO_1799 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1778983 657 - 0.496195
yeiP SBO_2153 putative elongation factorRecName: Full=Elongation factor P-like protein; chromosome CDS2128994 828 - 0.506039
yfcB SBO_2368 putative adenine-specific methylaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS2356458 1266 - 0.514218
yfhC SBO_2587 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2594433 537 - 0.540037
yfiA SBO_2635 putative yhbH sigma 54 modulatorSubName: Full=Putative yhbH sigma 54 modulator; chromosome CDS2640995 342 + 0.459064
yfiF SBO_2613 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2617173 1038 - 0.565511
yfjA SBO_2744 conserved hypothetical proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS2754252 558 - 0.487455
ygcA SBO_2666 putative enzymeRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS2670412 1302 - 0.513057
ygjO SBO_2945 putative enzymeRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS2951967 1137 - 0.539138
yhaR SBO_2978 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2981829 453 - 0.523179
yhbY SBO_3202 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3206908 294 - 0.486395
yhdG SBO_3254 putative dehydrogenaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS3258513 966 + 0.520704
yibK SBO_3612 conserved hypothetical proteinRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS3630000 474 + 0.550633
yihZ SBO_3901 conserved hypothetical proteinRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS3928022 438 + 0.552511
yjbC SBO_4050 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS4093226 873 + 0.521191
yjbN SBO_4068 conserved hypothetical proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS4110953 1038 - 0.534682
yjeA SBO_4301 putative lysyl-tRNA synthetaseRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; chromosome CDS4350471 1008 - 0.516865
yjeJ SBO_4311 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4359863 870 + 0.451724
yjfH SBO_4276 conserved hypothetical proteinRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4324272 732 - 0.557377
yjgF SBO_4203 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4251447 426 + 0.504695
yjgH SBO_4199 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4249191 396 + 0.472222
yjiI SBO_4382 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4434772 501 + 0.481038
yjjT SBO_4432 putative enzymeRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4484148 1032 - 0.546512
ykgM SBO_0223 putative ribosomal proteinRecName: Full=50S ribosomal protein L31 type B; chromosome CDS236559 264 + 0.462121
yleA SBO_0525 conserved hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS544412 1425 - 0.541053
yliG SBO_0727 conserved hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS746030 1326 - 0.527903
ymfC SBO_1904 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1884739 624 + 0.514423
yqcB SBO_2672 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2679700 783 - 0.535121
yrdC SBO_3276 conserved hypothetical proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS3279125 573 - 0.525305
yrfH SBO_3387 conserved hypothetical proteinRecName: Full=Heat shock protein 15; chromosome CDS3371372 402 + 0.532338